Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq30224 127 1e-24 >seq30224 Length=530 Score = 127 bits (140), Expect = 1e-24 Identities = 175/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 830 AAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGAC 889 ||| | || |||||||||||||| |||||| ||||||| ||| ||| || | Sbjct 186 AAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAAT 245 Query 890 CTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTAC 949 | ||| || ||||||||| |||| || ||| | | |||||||| | || Sbjct 246 TTGGCCGCAGGATTCCCGCTGCTCACGACCAAGAAGCTATCCCTCAAATCGATCATTCAC 305 Query 950 GAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTC 1009 ||||| || |||||||| || ||||| || ||| | ||| ||||| ||| |||||||| Sbjct 306 GAACTGCTCTGGTTCCTGAGGGGCGATACCAACATCAAGTATCTCAAGGACCACGGCGTC 365 Query 1010 ACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAG 1069 | ||||||||||||||||| || | || |||||||||| ||||| || | ||| Sbjct 366 TCGATCTGGGACGAGTGGGCGGATGAGAATGGCGACCTCGGTCCGGTCTATGGTTCTCAG 425 Query 1070 TGGCG 1074 ||||| Sbjct 426 TGGCG 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295985948201646