Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq27016 156 1e-33 >seq27016 Length=551 Score = 156 bits (172), Expect = 1e-33 Identities = 182/246 (74%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 40167 AAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40226 ||||||||||| | ||||||||| || || || || || |||||||| |||||||| | Sbjct 536 AAGTCGATGTCGAAGTCGGGCATCGAAACCCGTTCCGGATTCAGGAAGCGCTCGAACAGC 477 Query 40227 AGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGCGAACCG 40286 | | | | | || || || || || ||||| || | || || ||||||||||| Sbjct 476 AAGTCATACTCAAGCGGATCAAGATCGGTAATGCCCAGTGAATACGCCACCAGCGAACCA 417 Query 40287 GCAGCCGAGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAG 40346 || | || || || || || |||||| ||| ||||| ||||||||||| ||||||| Sbjct 416 GCGCCGGAACCCCGGCCCGGACCGACCGGCACACCGTTGGCCTTGGCCCAGTTGATGAAG 357 Query 40347 TCGGCGACGACCAGGAAGTAGGACGGGAACCCCAGCTGGATGATCATGTCGATCTCGTAC 40406 ||||| |||| |||||||||| ||||| |||| ||| ||| ||| |||||||| | Sbjct 356 TCGGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTGTTGGATGATGCCGATCTCGAAT 297 Query 40407 TGAAGC 40412 | |||| Sbjct 296 TCAAGC 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160064265308688