Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq33184 100 8e-17 >seq33184 Length=504 Score = 100 bits (110), Expect = 8e-17 Identities = 177/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 28655 CGGTCATGCTCGATTGCCTTGTCGGACGGCGCCGAACGCCAGTCCGGCCAGGTGCGCGCC 28714 |||||||||||||| || |||| | | |||||||||||||| ||||| ||| Sbjct 34 CGGTCATGCTCGATCGCACTGTCTTCGCTCATGGTGCGCCAGTCCGGCCAAGTGCGGGCC 93 Query 28715 TCGTTCTTCGTCTGCTTGGCGACCAGAGC--GTCGATTATCTGCGCCGGAGTGGCGCCGG 28772 ||| ||| ||| || |||| || || | | ||| | | | || |||| Sbjct 94 ATGTTTTTCTGCTGTTTCGCGAGAAGTGCCGGCAGGAGATCGGAGGCCT--TGCCGCCAT 151 Query 28773 TCCGCCAAGCCCCGTCCAGAGCGAGAATCACAACGTCGATCCACTCGGCCAGGTCGCCAG 28832 |||||| || |||| |||||||| || || |||| ||| |||| ||||||| | Sbjct 152 GCCGCCAGAAACCATCCATGGCGAGAATGACGACATCGACCCATTCGGACAGGTCGTGCG 211 Query 28833 GGGCTTCCTCGATCTCGCGCAGTTCCTTGCGGATGTGGTCGATGACGCCGGCGGCGCGCG 28892 || | | |||||||||||||| || |||||||| || ||||| || || || |||| Sbjct 212 GGTCCTGCTCGATCTCGCGCAACTCTTTGCGGATATGTTCGATAACACCCTTGGTGCGCA 271 Query 28893 ACCCAGGCCCGAACGT 28908 || | || ||||| || Sbjct 272 ACGCCGGGCCGAAAGT 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138298672521828