Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq157 194 4e-44 seq57 192 1e-43 seq58 174 3e-38 seq1 161 2e-34 seq146 147 5e-30 seq180 131 4e-25 seq170 131 4e-25 seq145 127 4e-24 seq257 118 2e-21 seq96 118 2e-21 seq11185 102 2e-16 seq262 84.2 5e-11 >seq157 Length=426068 Score = 194 bits (214), Expect = 4e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || ||||| | || || || || || ||||| |||||| Sbjct 398055 CCACCACGGAGGCGGAGGACAAGATGAAGGGTTGACTCCTTCTGAATATTGTAATCAGCA 397996 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || ||||| || ||||||||||||| |||||| |||||| ||| Sbjct 397995 AGGGTTCGGCCATCTTCGAGTTGCTTACCGGCAAAGATCAGACGTTGCTGGTCAGGAGGA 397936 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||| |||||||| || || | || || || || ||| || || Sbjct 397935 ATGCCCTCCTTGTCTTGAATCTTTGCCTTAACATTGTCAATTGTATCAGAACTCTCCACC 397876 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct 397875 TCGAGAGTGATCGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCAT 397829 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| || ||||| | || ||| || || ||||| || ||||| Sbjct 398968 ACCACCACGCAGACGAAGAACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCAGC 398909 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || | || || |||||||| |||| | || || || || Sbjct 398908 GAGGGTACGACCATCTTCCAACTGCTTACCGGCAAAAATCAGCCTCTGCTGATCTGGAGG 398849 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 || || |||||||| || ||||||| ||| || |||| ||||| ||||| ||| || | Sbjct 398848 GATCCCTTCCTTGTCCTGTATCTTTGTTTTCACATTATCAATAGTATCCGA-GCTCTCCA 398790 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || |||||||||||||| || || | |||||| ||||| |||||||| Sbjct 398789 CCTCCAGAGTGATCGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 398741 Score = 138 bits (152), Expect = 2e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || || || || | || || || ||||||||||| || || Sbjct 398739 CCACCACGCAGGCGGAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCC 398680 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || || || ||||| || || || || |||||||| | | ||| ||||| || Sbjct 398679 AATGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGG 398620 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 ||||||||||||||||| |||||||| || || | || || || |||| |||| ||||| Sbjct 398619 ATACCCTCCTTGTCTTGTATCTTTGCCTTCACATTGTCAATTGTATCCG-AGCTCTCGAC 398561 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||| || ||||| || || | |||||| ||||| || ||||| Sbjct 398560 CTCCAAAGTAATGGTCTTTCCTGTGAGAGTCTTGACGAAAATTTGCAT 398513 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || ||||| || | || || || ||||| || || ||||| Sbjct 398283 CCACCACGAAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATATTATAATCAGCT 398224 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| |||||||| || |||||||||| | |||||||| ||| Sbjct 398223 AGAGTACGACCATCCTCGAGTTGTTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGTGGA 398164 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||| || || || || || | || || ||||| || ||| || Sbjct 398163 ATCCCTTCCTTGTCTTGAATTTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACC 398104 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || || | || || || || || ||||| Sbjct 398103 TCAAGGGTAATGGTCTTCCCTGTTAGGGTTTTGACAAAGATTTGCAT 398057 Score = 122 bits (134), Expect = 2e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || | ||| | || || |||||||| ||||| || || Sbjct 398512 ACCACCACGAAGACGAAGGACTAAATGAAGGGTAGACTCCTTTTGGATATTGTAATCTGC 398453 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || |||||||| ||||| || ||||||||||| | | ||||| || || Sbjct 398452 CAAAGTACGACCATCCTCAAGTTGCTTACCGGCAAAGATGAGCCTCTGTTGATCTGGTGG 398393 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 ||||| ||||||||||| ||||| || || || | || || || || | |||| || | Sbjct 398392 GATACCTTCCTTGTCTTGTATCTTAGCCTTCACATTGTCAATCGTATCAG-AGCTCTCAA 398334 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || | ||| || ||||| || || | |||||| || || || ||||| Sbjct 398333 CCTCCAAAGTAATGGTCTTTCCAGTGAGAGTCTTGACAAAGATTTGCAT 398285 >seq57 Length=33024243 Score = 192 bits (212), Expect = 1e-43 Identities = 181/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||| ||||| || || || | || ||||| ||||||||||| ||||| Sbjct 18658231 ACCACCTCTCAGACGAAGAACAAGGTGAAGAGTCGACTCTTTCTGGATGTTGTAATCAGC 18658290 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || |||||||| ||||| || |||| |||||||||||| || Sbjct 18658291 AAGTGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCTGGTGG 18658350 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || |||||||||||||||||||| || | ||||| ||||| || | |||||| Sbjct 18658351 AATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGGATTCGAC 18658410 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| || || || || |||||||| | || || ||||| |||||||| || Sbjct 18658411 TTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18658461 >seq58 Length=2649046 Score = 174 bits (192), Expect = 3e-38 Identities = 153/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| || || || ||||| || || |||||||| ||||||||| Sbjct 1146661 TCCTTTTGGATGTTGTAGTCGGCGAGAGTTCGGCCGTCTTCAAGTTGTTTTCCGGCAAAG 1146602 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || ||||||||||| || ||||| || |||||||||||||||||||| |||||| | Sbjct 1146601 ATTAAACGTTGTTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTTACGTTG 1146542 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| ||| || || |||||||| || ||||| || || | || || ||| Sbjct 1146541 TCGATGGTGTCGGAACTCTCAACCTCGAGAGTTATGGTCTTGCCGGTAAGGGTTTTCACG 1146482 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 1146481 AAGATTTGCAT 1146471 Score = 163 bits (180), Expect = 6e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||| || || || || || || | ||| || || || |||||||| |||| Sbjct 1147839 AACCACCACGAAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAG 1147780 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 | | || || |||||||| ||||| || || ||||||||||| | || |||||| | Sbjct 1147779 CCAAAGTACGTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGTG 1147720 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||||||||| || || ||||| || || || |||| || |||||||| ||| | Sbjct 1147719 GAATACCCTCCTTATCCTGAATCTTGGCCTTCACATTATCAATCGTGTCCGAGCTTTCAA 1147660 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | || | |||||| || || || ||||| |||||||| || ||||||||| Sbjct 1147659 CCTCCAAAGTGATGGTTTTCCCAGTCAAGGTCTTAACAAAGATCTGCATT 1147610 Score = 145 bits (160), Expect = 2e-29 Identities = 149/192 (78%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||| ||||| || ||||| || | |||||||| || || || || ||||| Sbjct 1147573 TCCTTTTGGATATTGTAATCCGCAAGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAA 1147514 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || ||||| |||||||||||||| || ||||||||||| || || | Sbjct 1147513 ATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGGATCTTTGCCTTGACATTG 1147454 Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||||| |||| || || || | |||||| ||||| || ||||| ||||| || Sbjct 1147453 TCGATCGTGTCCG-AGCTCTCAACCTCCAAAGTGATGGTCTTCCCGGTCAAGGTCTTCAC 1147395 Query 283088 GAATATCTGCAT 283099 || |||||||| Sbjct 1147394 AAAAATCTGCAT 1147383 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| ||||| || || || || || || || || || || || || || ||| Sbjct 1146889 TCCTTCTGGATATTGTAATCGGCGAGGGTTCGCCCGTCTTCGAGCTGCTTTCCAGCGAAG 1146830 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||| ||||| ||||| || ||||||||||| || || ||||| ||| | Sbjct 1146829 ATCAGCCTTTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTGACGTTG 1146770 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 |||||||| || ||| ||||||||| || ||||| ||||| || || | |||||| ||| Sbjct 1146769 TCGATAGTATCGGAACTTTCGACTTCAAGGGTGATTGTCTTGCCAGTAAGAGTCTTGACG 1146710 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 1146709 AAGATCTGCAT 1146699 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | || || || |||| ||| | ||| ||| || ||||| ||||| ||||| Sbjct 1147154 ACCTCCCCTCAAACGGAGAACCAAATGAAGGGTGGATTCCTTCTGGATATTGTAATCAGC 1147095 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || || || || || ||||||||||| | || ||||| || Sbjct 1147094 CAAAGTACGGCCATCTTCGAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAGG 1147035 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| |||||||| || ||||| || || || | ||||| || ||||| ||| || Sbjct 1147034 AATACCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATCGTATCCGAGCTTTCAAC 1146975 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| |||||||| || || | |||||| || || || ||||| Sbjct 1146974 TTCCAAAGTAATCGTCTTCCCGGTGAGAGTCTTCACAAAGATTTGCAT 1146927 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || ||||| |||| ||| | || || || ||||||||||||||||| Sbjct 1147382 ACCACCCCTCAAACGAAGCACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGC 1147323 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | |||||||| || || || || || |||||||| | || || || || Sbjct 1147322 CAAAGTCCTTCCATCCTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGGGG 1147263 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||| || ||||| || || || || | |||||||| || ||| || || Sbjct 1147262 AATACCTTCCTTATCCTGGATTTTCGCCTTGACATTGTCGATAGTATCGGAACTCTCCAC 1147203 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 1147202 CTCCAAGGTGATAGTCTTGCCAGTCAATGTCTTGACAAAAATCTGCAT 1147155 >seq1 Length=34941034 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || ||||| |||| ||| | || ||| ||||||||||||||||| || Sbjct 3649562 CCACCCCTGAGACGAAGAACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAGTCTGCT 3649503 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| | |||||||| ||||||||||| |||||||||| | || || || ||| Sbjct 3649502 AACGTCCTTCCATCCTCCAGTTGTTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGTGGA 3649443 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || ||||||||||| |||||||| | || || ||||||| ||||| || ||| ||||| Sbjct 3649442 ATCCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATTGTGTCTGA-GCTCTCGAC 3649384 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||| || ||||| || || | ||| || || || || ||||| Sbjct 3649383 TTCGAGAGTAATAGTCTTTCCGGTGAGAGTTTTCACAAAGATTTGCAT 3649336 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || || || |||| || || || ||| ||||| ||||| |||||||| Sbjct 3650474 CCACCTCTGAGACGGAGGACCAAGTGCAAGGTTGATTCCTTTTGAATGTTATAGTCAGCT 3650415 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || ||||| || ||||| | | || |||||| | ||| Sbjct 3650414 AGAGTCCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGTCTCTGCTGGTCAGCTGGA 3650355 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||| ||||||||| || || | || ||||| ||||| ||| ||| Sbjct 3650354 ATTCCCTCCTTGTCTGTGATCTTTGCCTTCACATTGTCAATAGTATCCGAGCTTTCAACT 3650295 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 3650294 TCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCAT 3650248 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| ||||| || || ||| || || ||||||||||| ||||| | || | |||| Sbjct 3650234 CGAAGAACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAATCAGCCAATGTCCTGCCA 3650175 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || ||||| ||||||||||| | | ||||||||| | ||||| || |||||| Sbjct 3650174 TCCTCAAGCTGTTTACCGGCAAAGATGAGTCTCTGTTGGTCAGCTGGAATGCCTTCCTTG 3650115 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 ||| ||||| || || || | || || || || || ||| ||||| || ||||| Sbjct 3650114 TCTGTAATCTTCGCCTTCACATTGTCAATGGTATCTGAGCTTTCAACTTCCAGTGTGATG 3650055 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || | |||||| || || |||||||| Sbjct 3650054 GTCTTGCCAGTAAGAGTCTTCACAAAGATCTGCAT 3650020 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | | ||| || |||| || | ||| || |||||||||||||| || || Sbjct 3649791 ACCACCCCTTAAGCGGAGAACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCTGC 3649732 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || | ||| || ||||||||||| | | ||| ||||| || Sbjct 3649731 TAGAGTCCGACCATCTTCCAATTGCTTTCCGGCAAAGATAAGCCTTTGCTGGTCTGGTGG 3649672 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| || || |||| || || | || |||||||| || |||||| Sbjct 3649671 GATACCCTCCTTATCAGTAATTTTTGTCTTAACATTGTCAATAGTGTCTGAGCTTTCGAC 3649612 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| || || |||||||| Sbjct 3649611 CTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 3649564 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| ||||| || || ||| || || ||||| || || || || | || | |||| Sbjct 3650006 CGAAGCACCAGGTGCAAAGTGGACTCCTTCTGGATATTATAATCGGCCAATGTCCTGCCA 3649947 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || ||||| ||||||||||| | | || ||||| || || || |||||| Sbjct 3649946 TCCTCAAGCTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCTTCCTTG 3649887 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || || ||||| | || ||| | || |||||||| ||| || ||||| | || | Sbjct 3649886 TCCTGAATCTTAGTCTTGACGTTCTCAATAGTGTCAGAACTCTCAACTTCCAAGGTTACT 3649827 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || | || ||||| || |||||||| Sbjct 3649826 GTCTTGCCTGTGAGGGTTTTAACAAAGATCTGCAT 3649792 >seq146 Length=1334862 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || |||| || | ||| |||||| || |||||||| || || Sbjct 1120096 ACCACCACGAAGCCTTAGCACCAAGTGAAGCGTTGATTCTTTCTGAATGTTGTAATCTGC 1120037 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| || | |||||| ||||| || |||| |||||||| || || Sbjct 1120036 GAGAGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAAATCAGGCGTTGTTGATCTGGTGG 1119977 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || |||||||||||||||| ||| ||| | ||||| || || |||| ||| || Sbjct 1119976 AATTCCTTCTTTGTCTTGGATCTTTGTTTTCACGTTGTCGATTGTATCGGAAGATTCCAC 1119917 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| || || || || || || || | || || ||||| ||||||||| Sbjct 1119916 TTCTAGGGTTATGGTTTTTCCAGTTAGGGTTTTCACGAAAATCTGCATT 1119868 >seq180 Length=370853 Score = 131 bits (144), Expect = 4e-25 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||||||| ||||| ||||| || |||||||| ||||| || Sbjct 23709 TCTTTCTGGATGTTGTAATCAGCAAGTGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAA 23650 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| ||||||||||| ||||| || || |||||||||||||||||||| || | Sbjct 23649 ATCAGACGTTGTTGGTGTGGTGGAATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTG 23590 Query 283029 TCGATAGTGT 283038 ||||| |||| Sbjct 23589 TCGATGGTGT 23580 >seq170 Length=38796167 Score = 131 bits (144), Expect = 4e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | | |||| ||| | | | |||||| || |||||||| || | Sbjct 3261137 ACCACCACGAAGCCTGAACACCAAATGAAGCTTCAATTCTTTCTGAATGTTGTAATCTAC 3261196 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| || | |||||| | ||| || |||| |||||||| || | Sbjct 3261197 GAGAGTTCTTCCATCTTCCAATTGTTTTCTGGCGAAAATCAGGCGTTGTTGATCTGGTGA 3261256 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||||||||||| ||| ||| | ||||| | || ||| |||||| Sbjct 3261257 AATTCCTTCCTTGTCTTGGATCTTTGTTTTCACGTTGTCGATTATATCGAAAGATTCGAC 3261316 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATA 283106 ||| || || || || || | || | || || ||||| ||||||||||| ||| Sbjct 3261317 TTCTAGGGTTATGGTTTTTCTAGTTACGGTTTTCACGAAAATCTGCATTTTGATA 3261371 >seq145 Length=44152522 Score = 127 bits (140), Expect = 4e-24 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||||||| ||||| ||||| || |||||||| ||||| || Sbjct 33200738 TCTTTCTGGATGTTGTAATCAGCAAGTGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAA 33200679 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| ||||||||||| ||||| || || || ||||||||||||||||| || | Sbjct 33200678 ATCAGACGTTGTTGGTGTGGTGGAATGCCTTCTTTATCTTGGATCTTTGCTTTCACATTG 33200619 Query 283029 TCGATAGTGT 283038 ||||| |||| Sbjct 33200618 TCGATGGTGT 33200609 Score = 118 bits (130), Expect = 2e-21 Identities = 146/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 282874 CACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAA 282933 |||||||||| ||||| || ||||| | || ||| || || ||||| || || |||| Sbjct 18651144 CACCACGCAGACGAAGAACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCGGCAA 18651203 Query 282934 GCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAA 282993 | || || ||||| || | || || |||||||| |||| | || || || || | Sbjct 18651204 GGGTACGACCATCTTCCAACTGCTTACCGGCAAAAATCAGCCTCTGCTGATCTGGAGGGA 18651263 Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACT 283052 | || |||||||| || ||||||| ||| || |||| ||||| ||||| ||| || || Sbjct 18651264 TCCCTTCCTTGTCCTGTATCTTTGTTTTAACATTATCAATAGTATCCGA-GCTCTCAACC 18651322 Query 283053 TCGAGAGTGATCGTCTT 283069 || |||||||||||||| Sbjct 18651323 TCCAGAGTGATCGTCTT 18651339 >seq257 Length=328955 Score = 118 bits (130), Expect = 2e-21 Identities = 146/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 282874 CACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAA 282933 |||||||||| ||||| || ||||| | || ||| || || ||||| || || |||| Sbjct 268824 CACCACGCAGACGAAGAACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCGGCAA 268765 Query 282934 GCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAA 282993 | || || ||||| || | || || |||||||| |||| | || || || || | Sbjct 268764 GGGTACGACCATCTTCCAACTGCTTACCGGCAAAAATCAGCCTCTGCTGATCTGGAGGGA 268705 Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACT 283052 | || |||||||| || ||||||| ||| || |||| ||||| ||||| ||| || || Sbjct 268704 TCCCTTCCTTGTCCTGTATCTTTGTTTTAACATTATCAATAGTATCCGA-GCTCTCAACC 268646 Query 283053 TCGAGAGTGATCGTCTT 283069 || |||||||||||||| Sbjct 268645 TCCAGAGTGATCGTCTT 268629 >seq96 Length=52461754 Score = 118 bits (130), Expect = 2e-21 Identities = 102/125 (82%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||||||| ||||| ||||| || | |||||| ||||| || Sbjct 45648253 TCTTTCTGGATGTTGTAATCAGCAAGTGTGCGACCATCTTCAA-TTGTTTTCCGGCGAAA 45648311 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| ||||||||||| ||||| || || |||||||||||||||||||| || | Sbjct 45648312 ATCAGACGTTGTTGGTGTGGTGGAATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTG 45648371 Query 283029 TCGAT 283033 ||||| Sbjct 45648372 TCGAT 45648376 >seq11185 Length=774 Score = 102 bits (112), Expect = 2e-16 Identities = 110/142 (77%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 109935 GATTGCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATTGT 109994 |||||| ||| | ||||||||||||||||||||||||| | ||||||| | ||||| Sbjct 149 GATTGCGACACCGTCAAATTGCGGGAACCCCCTAAAGCCTCATCTACCAAGTTGGATTG- 207 Query 109995 GAAAGCATCAGCTGGCCGAG--AACAGAACTCGGGTATGGTAAAAATTCATATGATGCCA 110052 |||| || |||||||| ||||| || ||||| ||||| || | |||| | Sbjct 208 GAAACAGTCCAATGGCCGAGTTAACAGCCCT-GGGTACGGTAACAACGATGAGGATGGAA 266 Query 110053 CAATGGGCAATCCGCAGCCAAG 110074 |||||||||||||||||||||| Sbjct 267 CAATGGGCAATCCGCAGCCAAG 288 >seq262 Length=354569 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||| ||||||||||| |||||||| || || ||||| || ||||| || || ||||||| Sbjct 263612 CTTTCTGGATGTTGTAATCAGCAAGAGTACGACCATCATCAAGTTGCTTACCAGCAAAGA 263553 Query 282970 TCAAACGTTGTTGGTC 282985 ||||||| || ||||| Sbjct 263552 TCAAACGCTGCTGGTC 263537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046199446968884