Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq146 181 3e-40 seq157 179 9e-40 seq58 178 3e-39 seq57 176 1e-38 seq1 163 7e-35 seq257 152 1e-31 seq145 152 1e-31 seq180 132 1e-25 seq170 132 1e-25 seq96 102 2e-16 >seq146 Length=1334862 Score = 181 bits (200), Expect = 3e-40 Identities = 164/205 (80%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || |||||||| || ||||| || |||||| || || Sbjct 1119872 CAGATTTTCGTGAAAACCCTAACTGGAAAAACCATAACCCTAGAAGTGGAATCTTCCGAT 1119931 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| |||||| || |||||||||||||| || || || || ||| Sbjct 1119932 ACAATCGACAACGTGAAAACAAAGATCCAAGACAAAGAAGGAATTCCACCAGATCAACAA 1119991 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||||||||| | ||||||||||| ||||| || ||||| ||| | Sbjct 1119992 CGCCTGATTTTCGCCGGAAAACAATTGGAAGATGGAAGAACTCTCGCAGATTACAACATT 1120051 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||||||||| || || |||| Sbjct 1120052 CAGAAAGAATCAACGCTTCA-CTTG 1120075 >seq157 Length=426068 Score = 179 bits (198), Expect = 9e-40 Identities = 164/207 (79%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| |||||||| ||||| |||||||| || |||||||| ||||| || Sbjct 398744 CAGATTTTCGTGAAGACTCTCACTGGAAAGACGATCACTCTGGAGGTGGAGAGCTCGGAT 398803 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| |||||| |||||||| ||||| |||||||| || ||||| Sbjct 398804 ACTATTGATAATGTGAAAACAAAGATACAGGACAAGGAAGGGATCCCTCCAGATCAGCAG 398863 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || ||||| || ||| | |||||||| | || || || ||||||||| | Sbjct 398864 AGGCTGATTTTTGCCGGTAAGCAGTTGGAAGATGGTCGTACCCTCGCTGATTATAACATT 398923 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || |||||||| || ||||||||| Sbjct 398924 CAGAAGGAATCAACCCTTCATCTTGTT 398950 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || |||||||| ||||||||||| || || || Sbjct 397832 CAAATCTTTGTTAAGACCTTGACTGGTAAGACGATCACTCTCGAGGTGGAGAGTTCTGAT 397891 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||| ||||| || || || ||||| ||||||||| Sbjct 397892 ACAATTGACAATGTTAAGGCAAAGATTCAAGACAAGGAGGGCATTCCTCCTGACCAGCAA 397951 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || || ||||||||||| | || ||||| ||||| || | Sbjct 397952 CGTCTGATCTTTGCCGGTAAGCAACTCGAAGATGGCCGAACCCTTGCTGATTACAATATT 398011 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || |||||||| Sbjct 398012 CAGAAGGAGTCAACCCTTCATCTTGT 398037 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || |||||||||||||| || || || | ||||| || ||||| || Sbjct 398516 CAAATTTTCGTCAAGACTCTCACAGGAAAGACCATTACTTTGGAGGTCGAGAGCTCGGAT 398575 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||| || ||||| || || ||||| || ||||||||| Sbjct 398576 ACAATTGACAATGTGAAGGCAAAGATACAAGACAAGGAGGGTATCCCACCAGACCAGCAA 398635 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || ||||| |||||||| || || | || | || ||||| ||| || Sbjct 398636 AGGCTTATCTTTGCTGGAAAGCAGCTCGAGGACGGTCGTACATTGGCAGATTACAACATC 398695 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 398696 CAGAAGGAGTCTACCCTTCACCTTGT 398721 >seq58 Length=2649046 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||||||||| || || || || || || || |||||||| || || || ||| Sbjct 1146474 CAAATCTTCGTGAAAACCCTTACCGGCAAGACCATAACTCTCGAGGTTGAGAGTTCCGAC 1146533 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||| || ||||| |||||||| ||||| || || ||| Sbjct 1146534 ACCATCGACAACGTAAAGGCAAAGATCCAAGACAAGGAAGGAATTCCTCCAGATCAACAA 1146593 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| ||||||||||| || ||||| || | ||||| ||||| || ||| || Sbjct 1146594 CGTTTAATCTTTGCCGGAAAACAACTTGAAGACGGCCGAACTCTCGCCGACTACAACATC 1146653 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || ||||| || |||||||| Sbjct 1146654 CAAAAGGAGTCAACTCTCCATCTTGT 1146679 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || |||||||| || || ||||| || || Sbjct 1146702 CAGATCTTCGTCAAGACTCTTACTGGCAAGACAATCACCCTTGAAGTCGAAAGTTCCGAT 1146761 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||||| || ||||| ||||| ||||| || || || ||||||||| Sbjct 1146762 ACTATCGACAACGTCAAAGCCAAAATTCAAGACAAGGAAGGCATTCCACCAGACCAGCAA 1146821 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || |||||||| ||||| ||||||||||| || | || || |||||||| || || Sbjct 1146822 AGGCTGATCTTCGCTGGAAAGCAGCTCGAAGACGGGCGAACCCTCGCCGATTACAATATC 1146881 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || || ||||| Sbjct 1146882 CAGAAGGAGTCAACTCTCCACCTTGT 1146907 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| |||||||| || || ||||| || | || || |||||||| || Sbjct 1146930 CAAATCTTTGTGAAGACTCTCACCGGGAAGACGATTACTTTGGAAGTTGAAAGCTCGGAT 1146989 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||||||||| ||||| || ||||| |||||||| Sbjct 1146990 ACGATCGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGTATTCCTCCAGACCAGCAG 1147049 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || |||||||||||||| | ||| | || ||||| || || Sbjct 1147050 AGGTTGATCTTTGCTGGTAAGCAGCTCGAAGATGGCCGTACTTTGGCTGATTACAATATC 1147109 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||| | ||| Sbjct 1147110 CAGAAGGAATCCACCCTTCATTTGGTT 1147136 Score = 127 bits (140), Expect = 5e-24 Identities = 152/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || | || || || || ||||| | ||||| || ||||| ||| Sbjct 1147386 CAGATTTTTGTGAAGACCTTGACCGGGAAGACCATCACTTTGGAGGTTGAGAGCTCGGAC 1147445 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||| ||||| || || || || || || |||||||| Sbjct 1147446 ACGATCGACAATGTCAAGGCAAAGATCCAGGATAAGGAGGGTATTCCCCCAGACCAGCAG 1147505 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || || ||||| || ||||| ||||||||||| ||||| || || Sbjct 1147506 AGGTTGATTTTTGCTGGTAAGCAGCTTGAGGATGGGAGGACTCTTGCGGATTACAATATC 1147565 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 1147566 CAAAAGGAGTCTACCCTTCA-CTTG 1147589 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | || || || || |||||| | |||||||| || || || Sbjct 1147158 CAGATTTTTGTCAAGACATTGACTGGCAAGACTATCACCTTGGAGGTGGAGAGTTCCGAT 1147217 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| || || ||||| || ||||| || || || || ||||| Sbjct 1147218 ACTATCGACAATGTCAAGGCGAAAATCCAGGATAAGGAAGGTATTCCCCCAGATCAGCAG 1147277 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||| || || ||||| || |||||||||||| | || || || ||| || Sbjct 1147278 AGGTTGATCTTCGCTGGTAAGCAGCTTGAGGATGGAAGGACTTTGGCTGACTACAACATC 1147337 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || || ||| Sbjct 1147338 CAGAAGGAGTCTACTCTTCAT 1147358 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || ||||| ||||| | ||||| |||||||| ||| Sbjct 1147614 CAGATCTTTGTTAAGACCTTGACTGGGAAAACCATCACTTTGGAGGTTGAAAGCTCGGAC 1147673 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||||| || || || || || || |||||||| Sbjct 1147674 ACGATTGATAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTATTCCACCTGACCAGCAG 1147733 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || ||||| || || || |||||| | ||| | || ||||| ||| | Sbjct 1147734 AGGTTGATCTTTGCTGGAAAGCAACTTGAGGATGGACGTACTTTGGCTGATTACAACATT 1147793 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 1147794 CAGAAGGAGTCCACTCTTCACCTTGT 1147819 >seq57 Length=33024243 Score = 176 bits (194), Expect = 1e-38 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177916 AAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAA 177975 ||| | | || || ||||||||||| || || || ||||| || ||||| || || ||| Sbjct 18658463 AAAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAAGTCGAAT 18658404 Query 177976 GCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035 ||| ||||||||||| || || ||| |||||| || ||||||||||| || || || | Sbjct 18658403 CCTCCGACACCATCGACAATGTGAAAGCAAAGATCCAAGACAAAGAAGGCATTCCACCAG 18658344 Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095 |||| ||||| || || |||||||||||||| || |||||||| | || ||||| |||| Sbjct 18658343 ACCAACAACGTCTGATTTTCGCCGGAAAACAACTTGAAGATGGTCGCACACTTGCTGATT 18658284 Query 178096 ATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 | ||| |||| ||||| || || || || |||||| Sbjct 18658283 ACAACATCCAGAAAGAGTCGACTCTTCACCTTGTT 18658249 >seq1 Length=34941034 Score = 163 bits (180), Expect = 7e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||||||||| ||||| || || || ||||| || || ||||||||| Sbjct 3649339 CAAATCTTTGTGAAAACTCTCACCGGAAAGACTATTACTCTCGAAGTCGAGAGCTCAGAC 3649398 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || || || || || ||||| Sbjct 3649399 ACAATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGGATTCCACCAGATCAGCAG 3649458 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || ||||| || || ||||||||||| | || || || ||| || Sbjct 3649459 AGGCTGATCTTTGCTGGGAAACAACTGGAGGATGGAAGGACGTTAGCAGACTACAACATC 3649518 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 ||||| |||||||| || ||| | ||| | | ||||| Sbjct 3649519 CAAAAGGAATCAACTCTTCATTTGGTTCTTCGTCTCAG 3649556 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| |||||||| || || | ||| | || || || || || ||| Sbjct 3649795 CAGATCTTTGTTAAAACCCTCACAGGCAAGACAGTAACCTTGGAAGTTGAGAGTTCTGAC 3649854 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||||||||| |||||||||||||| ||||||||||| || |||||||| Sbjct 3649855 ACTATTGAGAACGTCAAGACTAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAGCAG 3649914 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| ||||| |||||||| || ||||| ||||| | ||||||||||| || Sbjct 3649915 AGGCTCATCTTTGCCGGTAAACAGCTTGAGGATGGCAGGACATTGGCCGATTATAATATC 3649974 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || |||| || || Sbjct 3649975 CAGAAGGAGTCCACTTTGCACCTGGT 3650000 Score = 145 bits (160), Expect = 2e-29 Identities = 160/209 (77%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || |||||||| ||||| |||||||||||| Sbjct 3649567 CAGATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTCGAAAGCTCAGAC 3649626 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 || || || || || || |||||| ||| || || || || ||||| || |||||||| Sbjct 3649627 ACTATTGACAATGTTAAGACAAAA-ATTACTGATAAGGAGGGTATCCCACCAGACCAGCA 3649685 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 | | |||||||| |||||||| || | |||||||| ||||||| || ||||| ||| | Sbjct 3649686 AAGGCTTATCTTTGCCGGAAAGCAATTGGAAGATGGTCGGACTCTAGCAGATTACAACAT 3649745 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131 |||||| || || || || || |||| || Sbjct 3649746 CCAAAAGGAGTCCACCCTCCA-CTTGGTT 3649773 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || || || |||||||| |||||||| || || || Sbjct 3650479 CAGATCTTTGTGAAGACCCTCACTGGGAAGACTATCACCCTTGAGGTGGAGAGTTCTGAT 3650538 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| ||||| |||||||| || ||||| Sbjct 3650539 ACAATTGATAATGTGAAGACCAAGATTCAGGACAAGGAAGGTATCCCTCCAGATCAGCAG 3650598 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || ||| | || ||||| | ||||| || ||||| || | Sbjct 3650599 AGACTCATCTTTGCTGGGAAGCAGTTGGAGGATGGGCGAACTCTGGCAGATTACAATATT 3650658 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 3650659 CAGAAGGAGTCGACCCTTCACCTTGT 3650684 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||| || || || || ||||| || || || ||||||||||| Sbjct 3650023 CAGATCTTTGTGAAGACTCTTACTGGCAAGACCATCACACTGGAAGTTGAAAGCTCAGAT 3650082 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||| ||||| ||||| || || | ||||| || Sbjct 3650083 ACCATTGACAATGTGAAGGCGAAGATTACAGACAAGGAAGGCATTCCAGCTGACCAACAG 3650142 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| ||||| |||||||| || ||||| ||||| | || ||||| ||| || Sbjct 3650143 AGACTCATCTTTGCCGGTAAACAGCTTGAGGATGGCAGGACATTGGCTGATTACAACATC 3650202 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || |||| || ||| Sbjct 3650203 CAGAAGGAGTCCACTTTGCACCTGGTT 3650229 >seq257 Length=328955 Score = 152 bits (168), Expect = 1e-31 Identities = 143/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 177949 GAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGA 178008 |||| |||||||| || ||||| || ||||| || || || || || || ||| ||||| Sbjct 268627 GAAAGACGATCACTCTGGAGGTTGAGAGCTCGGATACTATTGATAATGTTAAAACAAAGA 268686 Query 178009 TTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGC 178068 | |||||||| ||||| |||||||| || ||||| | || || || ||||| || ||| Sbjct 268687 TACAGGACAAGGAAGGGATCCCTCCAGATCAGCAGAGGCTGATTTTTGCCGGTAAGCAGT 268746 Query 178069 TCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 | |||||||| | || ||||||||||||||| | || || |||||||| || ||||||| Sbjct 268747 TGGAAGATGGTCGTACCCTTGCCGATTATAACATTCAGAAGGAATCAACCCTTCATCTTG 268806 Query 178129 TT 178130 || Sbjct 268807 TT 268808 >seq145 Length=44152522 Score = 152 bits (168), Expect = 1e-31 Identities = 143/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 177949 GAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGA 178008 |||| |||||||| || ||||| || ||||| || || || || || || ||| ||||| Sbjct 18651341 GAAAGACGATCACTCTGGAGGTTGAGAGCTCGGATACTATTGATAATGTTAAAACAAAGA 18651282 Query 178009 TTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGC 178068 | |||||||| ||||| |||||||| || ||||| | || || || ||||| || ||| Sbjct 18651281 TACAGGACAAGGAAGGGATCCCTCCAGATCAGCAGAGGCTGATTTTTGCCGGTAAGCAGT 18651222 Query 178069 TCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 | |||||||| | || ||||||||||||||| | || || |||||||| || ||||||| Sbjct 18651221 TGGAAGATGGTCGTACCCTTGCCGATTATAACATTCAGAAGGAATCAACCCTTCATCTTG 18651162 Query 178129 TT 178130 || Sbjct 18651161 TT 18651160 Score = 132 bits (146), Expect = 1e-25 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || ||| |||||| || || |||||||| || || || |||| | Sbjct 33200609 ACACCATCGACAATGTGAAAGCAAAGATCCAAGATAAAGAAGGCATTCCACCACACCAAC 33200668 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 |||| || || |||||||||||||| || |||||||| | || ||||| ||||| ||| Sbjct 33200669 AACGTCTGATTTTCGCCGGAAAACAACTTGAAGATGGTCGCACACTTGCTGATTACAACA 33200728 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| ||||| || || |||||| | | |||||| Sbjct 33200729 TCCAGAAAGAGTCAACTCTTCACCTTGTTCTCCGTCTCAGA 33200769 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 |||||| || ||||||| || || || || ||||||||||| || |||||||||| | Sbjct 3408504 AGGAATTCCCTCGGACCAACAGCGTCTGATATTCGCCGGAAAGCAACTCGAAGATGACCG 3408563 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||||||||||| ||| | ||||||| Sbjct 3408564 TACTCTTGCCGATTACAACATTCAAAAAG 3408592 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||||||||||||||| ||||| ||||| || ||||| ||||| || Sbjct 3424913 CAGATTTTCGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAGGTTGAAAGTAGCGAT 3424972 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||| | || ||||| || || || ||||||||||| Sbjct 3424973 TCCATCAACAATGTCAAGGCCAAAATCCATGACAAAGAAGG 3425013 >seq180 Length=370853 Score = 132 bits (146), Expect = 1e-25 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || ||| |||||| || ||||||||||| || || || |||| | Sbjct 23580 ACACCATCGACAATGTGAAAGCAAAGATCCAAGACAAAGAAGGCATTCCACCACACCAAC 23639 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 |||| || || |||||||||||||| || |||||||| | || ||||| ||||| ||| Sbjct 23640 AACGTCTGATTTTCGCCGGAAAACAACTTGAAGATGGTCGCACACTTGCTGATTACAACA 23699 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || || || |||||| | | |||||| Sbjct 23700 TCCAGAAAGAGTCGACTCTTCACCTTGTTCTCCGTCTCAGA 23740 >seq170 Length=38796167 Score = 132 bits (146), Expect = 1e-25 Identities = 149/199 (75%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| | || ||||||| || ||||| || || ||| Sbjct 3261367 AAAATGC---AGATTTTCGTGAAAACCGTAACTAGAAAAACCATAACCCTAGAAGTCGAA 3261311 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 | || | ||||| ||||| ||| |||||| || ||||| |||||||| | || Sbjct 3261310 TCTTTCGATATAATCGACAACGTGAAAACAAAGATCCAAGACAAGGAAGGAATTTCACCA 3261251 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||||| || || |||||| ||||||| | ||||||||||| ||||| | ||| Sbjct 3261250 GATCAACAACGCCTGATTTTCGCCAGAAAACAATTGGAAGATGGAAGAACTCTCGTAGAT 3261191 Query 178095 TATAACGTCCAAAAAGAAT 178113 || ||| | || ||||||| Sbjct 3261190 TACAACATTCAGAAAGAAT 3261172 >seq96 Length=52461754 Score = 102 bits (112), Expect = 2e-16 Identities = 100/128 (78%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| || || ||| |||||| || ||||||||||| || || || |||| ||||| Sbjct 45648376 ATCGACAATGTGAAAGCAAAGATCCAAGACAAAGAAGGCATTCCACCACACCAACAACGT 45648317 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 || || |||||||||||||| | |||||||| | || ||||| ||||| ||| |||| Sbjct 45648316 CTGATTTTCGCCGGAAAACA-ATTGAAGATGGTCGCACACTTGCTGATTACAACATCCAG 45648258 Query 178107 AAAGAATC 178114 ||||| || Sbjct 45648257 AAAGAGTC 45648250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203110493749724