Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq548306 100 2e-16 seq1968 100 2e-16 >seq548306 Length=985 Score = 100 bits (110), Expect = 2e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| || || ||| || || || |||||||||||||| || || ||||| ||| Sbjct 261 CAGTTTTATGTGGCCAATGGCGAGTTATCATGTCAAATGTATCAGCGTTCTGCTGACATG 320 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || |||||||| || ||||| |||||| |||||| || || || | |||||||| ||| Sbjct 321 GGCCTGGGTGTGCCATTCAACATTGCATCTTATGCTCTCCTGACATGCATGATTGCCCAT 380 Query 20551 GTT 20553 ||| Sbjct 381 GTT 383 >seq1968 Length=64790 Score = 100 bits (110), Expect = 2e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| || || ||| || || || |||||||||||||| || || ||||| ||| Sbjct 24148 CAGTTTTATGTGGCCAATGGCGAGTTATCATGTCAAATGTATCAGCGTTCTGCTGACATG 24207 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || |||||||| || ||||| |||||| |||||| || || || | |||||||| ||| Sbjct 24208 GGCCTGGGTGTGCCATTCAACATTGCATCTTATGCTCTCCTGACATGCATGATTGCCCAT 24267 Query 20551 GTT 20553 ||| Sbjct 24268 GTT 24270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396498903169675