Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2836 84.2 2e-11 >seq2836 Length=35635 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || || || |||| ||||| || || ||||| || |||||||||||||| Sbjct 31971 TCCACCACGAAGCCTGAGAACCAAATGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGGC 32030 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || | | ||| || | ||||| || ||| | || || || || || || || Sbjct 32031 CAAAGTCCTGCCATCCTCGAGCTGTTTTCCAGCAAATATCAGCCTCTGCTGGTCGGGTGG 32090 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||||||||| ||||| | |||||| | ||| || ||| | ||| Sbjct 32091 AATACCTTCCTTATCCTGAATTTTTGCCTTGACATTGTCAATTGTATCAGAGCTCTCAAC 32150 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || || | ||||| || | || || ||||| ||||||||| Sbjct 32151 TTCGAGAGTAATAGTCTTGCCAGTAAGAGTCTTAACAAAGATTTGCATT 32199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 376792356216675