Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq544639 98.7 9e-16 seq24333 98.7 9e-16 >seq544639 Length=747 Score = 98.7 bits (108), Expect = 9e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || ||||| |||||||| ||||||||||||||| |||||| || ||||||||||| || Sbjct 268 CAAGCAAAGTCACAATGGAGGCCCTCATCTCTAGAAATAAGCTCATTTGAAAATGTCAAA 209 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13758 || ||||||| ||| | ||||| | ||| ||||| ||| Sbjct 208 CCCGGCATCATTCCCCTCTTTTTAAGCCAGAATATGGCA 170 >seq24333 Length=53945 Score = 98.7 bits (108), Expect = 9e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || ||||| |||||||| ||||||||||||||| |||||| || ||||||||||| || Sbjct 12459 CAAGCAAAGTCACAATGGAGGCCCTCATCTCTAGAAATAAGCTCATTTGAAAATGTCAAA 12400 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13758 || ||||||| ||| | ||||| | ||| ||||| ||| Sbjct 12399 CCCGGCATCATTCCCCTCTTTTTAAGCCAGAATATGGCA 12361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475287045780600