Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq511598 104 2e-17 >seq511598 Length=303 Score = 104 bits (114), Expect = 2e-17 Identities = 166/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 25738 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG--TCCGTGTACTCTGCTCCGA 25795 ||||| || || ||| | | | ||||||| || || || || || ||||| || |||| Sbjct 278 AGCTGGTCGACGCCCTTGCTCTGGTAGTCT-CCGTC-TGCATCGGTATACTCGGCACCGA 221 Query 25796 AATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGC 25855 ||| ||||||||||| ||||| || ||||| || || || ||| | ||||| | | Sbjct 220 AATGTCTCCACTGGAAGCCGTAGACGGGTCCCAGATCACCTTCTCTGCGGTGCTGCAGTC 161 Query 25856 CCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGG 25915 ||||| | | |||| | |||| |||||| |||||||||| | | | || | Sbjct 160 CCCTCGACTTGAGAAAGGCCTTGGATCCATTGCCGTCCCAGATGTGAATGTCTCGGTCTG 101 Query 25916 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGAC 25970 || ||||||| | |||| | || ||||||||||||||||||| || |||| Sbjct 100 TCAGGACTTTGGAATCTGTGCAGCCAGCGACGAACCACAGCAGCTCCTCCATGAC 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337849676657295