Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq502422 84.2 3e-11 seq23550 84.2 3e-11 >seq502422 Length=276 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 79719 GTGGAGTAGCAGAGGTTGTGAGCCATGATGATGGAAGGGTAGAGGCTGGCAAAGTCGAAC 79778 |||| ||||||||||||||||||||| ||||| |||||||| || ||| || || | | Sbjct 275 GTGGTGTAGCAGAGGTTGTGAGCCATCATGATTGAAGGGTACAGAGAGGCGAAATCCAGC 216 Query 79779 ACGGCCACGGGGTCGTTGTAGTAACCCACCTCGGGCTCAAACACCGTGGCGCCCTGGTA 79837 ||| || || | || ||| || || ||| ||||| || |||||||| || | ||| Sbjct 215 GTGGCAACAGGCTTGTCGTAATAGCCGGCCTGAGGCTCCAAGACCGTGGCACCTTCGTA 157 >seq23550 Length=44747 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 79719 GTGGAGTAGCAGAGGTTGTGAGCCATGATGATGGAAGGGTAGAGGCTGGCAAAGTCGAAC 79778 |||| ||||||||||||||||||||| ||||| |||||||| || ||| || || | | Sbjct 33748 GTGGTGTAGCAGAGGTTGTGAGCCATCATGATTGAAGGGTACAGAGAGGCGAAATCCAGC 33807 Query 79779 ACGGCCACGGGGTCGTTGTAGTAACCCACCTCGGGCTCAAACACCGTGGCGCCCTGGTA 79837 ||| || || | || ||| || || ||| ||||| || |||||||| || | ||| Sbjct 33808 GTGGCAACAGGCTTGTCGTAATAGCCGGCCTGAGGCTCCAAGACCGTGGCACCTTCGTA 33866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 748737820580400