Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq507837 87.8 2e-12 >seq507837 Length=291 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270 |||| || | ||| || ||||| || || || | || | || || | |||||| | Sbjct 238 TCATGAAGAGATCAGGGATCCAGAGGGCGTAGAAGAGTTCTCGAGCTCGGACTTCTTCCT 179 Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 | || ||| | | || || || || || | || || | |||||||| || | | Sbjct 178 TTCCGTGGTTCTTCCTGAGATCGAGGAACTCGAAGATGTCCGAGTGCCATGGCTCGACGT 119 Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390 | || || | |||||||||| || ||||| ||||| || | |||| ||||| |||| Sbjct 118 AGATGGCAAAGGCACCTGGTCGCTTGTTACCACCTTGGTCGACGTATCGAGCAGTGTTGT 59 Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448 | || |||| | ||| || ||||| || || || | |||||||||||| | ||| || Sbjct 58 TGTAGACTCGGAGCATGGGTACAATTCCGTTGGAGACACCATTGGTTCCAGCAATGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558230846520600