Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq40248 84.2 3e-11 >seq40248 Length=7278 Score = 84.2 bits (92), Expect = 3e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 197422 TTGACCTGAGACACTCCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGGACG 197481 ||||| ||| | | || || | | | | || || ||||||||||| || |||| ||| Sbjct 1989 TTGACAAGAGCCTCGCCATTGAGGAAGAGCAGATCGAAAGCAAAGACACAAACCTTGACC 1930 Query 197482 GTTATCTCTTCTTCCTTGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGG 197541 | || ||||| |||||||||| || |||||||| ||| |||| ||| || || | Sbjct 1929 TTAATGTCTTCGGCCTTGACATCCTTGCGTTTTCTCGTCATAAGCTGTTGGAAAGGCAAC 1870 Query 197542 ATCTGCTTCTTCTCAACGTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTTCACT 197601 | || ||||| ||||| ||||| || || | ||| ||||| | ||| ||| Sbjct 1869 ACCTTCTTCTCGTCAACATCCCAGGCGACGGTCTCGCAGTCCAGCACAAAACTCTTGGTA 1810 Query 197602 CCCTCGTTGATCGATTGGGGAAGCCTATTGATTATGTCGGGGTACTTCT 197650 || || |||| | | ||| ||| | || || || |||||||||| Sbjct 1809 CCGTCCTTGACCCAAGTGGGCAGCTTTGCGAGAATATCAGGGTACTTCT 1761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 672060884785200