Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03]
551,915 sequences; 564,011,153 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2580 201 2e-45
seq25376 185 1e-40
seq23651 158 2e-32
seq516970 143 4e-28
seq3771 143 4e-28
seq57182 141 1e-27
seq29405 132 8e-25
seq1820 132 8e-25
seq7635 131 3e-24
seq65591 118 2e-20
seq41724 116 6e-20
seq26684 111 2e-18
seq335334 107 3e-17
seq37458 100 4e-15
seq524802 98.7 2e-14
seq360519 96.9 5e-14
seq63223 96.9 5e-14
seq29561 91.5 2e-12
seq4923 87.8 3e-11
>seq2580
Length=28588
Score = 201 bits (222), Expect = 2e-45
Identities = 182/229 (79%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
|| |||| || |||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 11719 GCTTCGGCGACCTGGACCTCCTTCATGAAGCGGCCGCCCAGGTTCTCCAAAACGATGCCG 11660
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| ||||||||| |||||||| ||||| |||| ||||| ||||||||| | | ||
Sbjct 11659 TCGGAGGCGGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGGCGCTCGTCGGGGGTCAGG 11600
Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329
| |||| || | ||| | |||||||||||||||||||||||| |||||||||
Sbjct 11599 GCTTCCCAATGACGCTGGTCCTGGGAGAGGTCGACCTCCTCGGCGGTCCAGAAGGAGGCC 11540
Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
|||||||| |||||||| ||||| ||| |||| |||| |||||||
Sbjct 11539 TCGGCCTTCTTGTACATTTCCCAGATCTCCGGGTACTGGATCGGGAACA 11491
Score = 170 bits (188), Expect = 3e-36
Identities = 229/318 (72%), Gaps = 8/318 (3%)
Strand=Plus/Minus
Query 794347 TCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGC 794406
|||||| ||||| ||| ||| || | ||| ||||| | || ||||| || |||
Sbjct 12035 TCGCGA--GATCAGTTCATTGGAGAACGTCAAGCCAGGCATTAACCCTCGCTTTTTTAGC 11978
Query 794407 CAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACG 794466
||||| || | |||||||| |||||||| ||||| ||||||||| || ||| | |||
Sbjct 11977 CAAAATATTGAGCAGAAACTCCCCGAGAAGAAGATCCCCTCGACGCACGCGAAGGCAACG 11918
Query 794467 AGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCC 794526
| |||||| ||||| | || ||| || |||||| | ||||||| |||
Sbjct 11917 ATCCGCTCCGCAAAGGACTCGGAGCCATC------GATCCAGCGGAGGGCCCACTGCGCC 11864
Query 794527 TTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGG 794586
|| || ||| | || | || ||||| ||| | || ||| ||| |||||||||||
Sbjct 11863 TTCTTGGCCACGCAAGGGATGGTCTCGATCGCGTGGAACAGGCGGTTCTTCTCGACCGAA 11804
Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646
||||||| |||||| || | | ||| ||| |||| ||||||||||| || ||||||
Sbjct 11803 TCCTTGATGTAGGTCTCAAGCAAGAGGCTGTACATCTCGGAGTGGATGTTCTCAATGGCG 11744
Query 794647 ATCTGGAAGCCATAAAAG 794664
|||||||||||||| |||
Sbjct 11743 ATCTGGAAGCCATAGAAG 11726
>seq25376
Length=12287
Score = 185 bits (204), Expect = 1e-40
Identities = 232/318 (73%), Gaps = 8/318 (3%)
Strand=Plus/Minus
Query 794347 TCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGC 794406
|||||| ||||| ||| ||| || | ||| ||||| | || ||||| || |||
Sbjct 9914 TCGCGA--GATCAGTTCATTGGAGAACGTCAAGCCAGGCATTAACCCTCGCTTTTTTAGC 9857
Query 794407 CAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACG 794466
||||| || | |||||||| |||||||| ||||| ||||||||| || ||| | |||
Sbjct 9856 CAAAATATTGAGCAGAAACTCCCCGAGAAGAAGATCCCCTCGACGCAAGCGAAGGCAACG 9797
Query 794467 AGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCC 794526
| |||||| ||||| || || ||| || |||||| | ||||||| |||
Sbjct 9796 ATCCGCTCCGCAAAGGTCTCGGAGCCGTC------GATCCAGCGGAGGGCCCACTGAGCC 9743
Query 794527 TTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGG 794586
||||| ||| | || || || ||||| ||| | || ||| ||| |||||||||||
Sbjct 9742 TTTTTGGCCACGCAAGGGACGGTCTCGATTGCGTGGAACAGGCGGTTCTTCTCGACCGAA 9683
Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646
||||||| |||||| || | | ||| ||| |||| ||||||||||| || ||||||
Sbjct 9682 TCCTTGATGTAGGTCTCAAGCAAGAGGCTGTACATCTCGGAGTGGATGTTCTCAATGGCG 9623
Query 794647 ATCTGGAAGCCATAAAAG 794664
|||||||||||||| |||
Sbjct 9622 ATCTGGAAGCCATAGAAG 9605
Score = 183 bits (202), Expect = 5e-40
Identities = 178/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
|| |||| || |||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 9598 GCTTCGGCGACCTGGACCTCCTTCATGAAGCGGCCGCCCAGGTTCTCCAAAACGATGCCG 9539
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| ||||||||| |||||||| ||||| |||| ||||| ||||||||| | | ||
Sbjct 9538 TCGGAGGCGGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGGCGCTCGTCGGGGGTTAGG 9479
Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329
|||||||| ||| | ||| || |||||||| |||||||| ||||| |||
Sbjct 9478 TTTTCCCAGTGGCGGAGGTCCTGGGAGAGATCAACCTCCTCCGCGGTCCAGAAGGAAGCC 9419
Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
|||||||| |||||||| ||||| ||| |||| |||| |||||||
Sbjct 9418 TCGGCCTTCTTGTACATTTCCCAGATCTCCGGGTACTGGATCGGGAACA 9370
>seq23651
Length=24420
Score = 158 bits (174), Expect = 2e-32
Identities = 191/260 (73%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||||||||| || |||| ||| | || || |||||||| || | ||||||||
Sbjct 17813 CTGGTCGACATAGCGAGCAGTGTTGTTGTACACTCGCAGCATGGGTACGATACCGTTGGA 17754
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||||| || || | ||| | || | || || | ||||| | | ||
Sbjct 17753 GACACCGTTGGTTCCTGCGATGTATGATCCGGTAGCTCGGATGTTGTGGATGTTGAGACC 17694
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || ||||||| ||||||||| | || ||| | |||||||| |||||||| |||||
Sbjct 17693 GATACCTCCGGCCGTCTTGGAGATCATGGCACACGTCTTCAGCGTGTCGTAGATTCCCTC 17634
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| |||||| |||||||| | || ||||||||||| ||| ||| | |||||
Sbjct 17633 GATAGAGTCGTCCTTCATGCAGACCAAGAAGCACGACGAAAGTTGTGGGTTGGGTGTGCC 17574
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
| ||||||||||| ||||
Sbjct 17573 CGAGTTGAAGAGCGTAGGCG 17554
Score = 147 bits (162), Expect = 3e-29
Identities = 340/500 (68%), Gaps = 18/500 (4%)
Strand=Plus/Minus
Query 2069256 GACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTCTT 2069315
|||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| || || |||||
Sbjct 19208 GACGGTGAACTGAATGGCGTTGGCAGCAGGTCGGGTACGCAGGTAGTAGATACCAGTCTT 19149
Query 2069316 GAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATG-GACTCGGCATTCGGGACGG 2069374
||| || || ||| ||||| ||||||||| || | ||| | | || | |
Sbjct 19148 GAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGAGGTCAGCTGAC-CAAAGGTGGGAGCCG 19090
Query 2069375 CACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCATGT 2069434
| || || |||||||||||| || || | ||| | |||||||| |||||||
Sbjct 19089 AAAGGTGGATGTTGAGCGACTGTGATTGACAGATAAAGGCACCACGGTCGGCAGCCATGT 19030
Query 2069435 CGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGA-TGCGGC 2069493
||||| | | || | |||||| || |||||| | || ||||| || |
Sbjct 19029 CGATGATGGTCTTCTGCGAAATCTCCCAGACAGTCTTGTAGAGCTTCTTGATCCTGTCGG 18970
Query 2069494 GGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCC-CTGCGCTGCGATGAGGCGGT-CGC 2069551
|| | | | | | ||| ||||| || | | | |||||||| ||||| |
Sbjct 18969 GGATGCCGGGC-------ACGTTCTGAACCGATCCACCGTG-TGCGATGATGCGGTTCTT 18918
Query 2069552 GAAAGTCGGGCGT-CCACAGGCCGCGCGCCATCATGCGCTCG-ACCAGGTGGCGGTTGAC 2069609
| || | ||| |||||| || || | | || | | || | ||| |||| ||
Sbjct 18917 CATGGT--GTCGTTCCACAGACCTTGCTCGACCA-GTTCACGCAGCAGCCATGGGTTCAC 18861
Query 2069610 CACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCA 2069669
||| ||| || || | ||||| |||||||||||||||||| ||| | |||| |
Sbjct 18860 CACCTGAAACTCTCCAGCAAGCACACGGCGCGTGTAGATGTTGGAAGTGTAGGGCTCGAA 18801
Query 2069670 CGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAG 2069729
|||| || |||||||||||| ||||||| ||| || |||||| | |||| ||| ||
Sbjct 18800 GCACTCGTTGAAGCCCAGGATCTGAGACGTCGAGGCGGTAGGCATGGGTGCCAGGAGGAG 18741
Query 2069730 CGAGTTGCGCAGGCCGTACT 2069749
||||||||||||||||| ||
Sbjct 18740 CGAGTTGCGCAGGCCGTGCT 18721
Score = 127 bits (140), Expect = 3e-23
Identities = 290/440 (66%), Gaps = 2/440 (0%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGC 2071633
||| || || ||| ||||| ||||||| | | | ||||| ||||||| ||||||||
Sbjct 18252 ACTCGATGATCTCAGTGCAAAGGTTGGAGCTCTTGATCGTGCCGAGGTTCTTCTGGTTGC 18193
Query 2071634 TGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCG 2071693
| | ||||| |||| ||||||| |||||| |||| ||| |||||| |||| |||
Sbjct 18192 TCTTGCGGTTGGCGGCATCCTTGTACAGCATAAAGGGGTTACCGGTCTCGGTCTGAGCCT 18133
Query 2071694 TGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNN 2071753
|| || || |||| | | | || | || || | || |||||
Sbjct 18132 CGAGGACAGCGTACCACAGCTTCTGAGCCTTGATCGTCCTCTTGGCCTTGCCCTGCTTCT 18073
Query 2071754 NNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCT 2071813
||||||| || || | | |||| ||| || || || ||
Sbjct 18072 CGTAGCTCTCGTAGAGGGCTTCGAACTCCTCTCCGTACACCTCAGCGAGACCAGGGCACT 18013
Query 2071814 CGGACGGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCGCATAAACAGGTCG 2071872
||| ||||| | ||| ||||||||||| | || |||| || ||||||||||||
Sbjct 18012 CGGCTGGGCACATGAGTGACCAGTCGCCATTCTGTT-CCACACGCTTCATAAACAGGTCA 17954
Query 2071873 CACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 2071932
|||| ||| |||| ||||| || || || ||| ||||||||| |||||||||||
Sbjct 17953 GGGATCCAGAGGGCGTAGAAGAGCTCACGAGCTCGGACCTCCTCCTTTCCGTGGTTCTTG 17894
Query 2071933 TTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCG 2071992
|||||| || | || | || ||| | |||||| ||||| | |||| |||||||||
Sbjct 17893 CGCAGGTCCAGGAACTCAAAGATGTCCGAGTGCCAGGGCTCAATGTAGATGGCAAAGGCA 17834
Query 2071993 CCCTTGCGCTTGCCGCCGCC 2072012
|| |||||| ||| ||
Sbjct 17833 CCGGGACGCTTGTTGCCTCC 17814
>seq516970
Length=324
Score = 143 bits (158), Expect = 4e-28
Identities = 211/291 (73%), Gaps = 11/291 (4%)
Strand=Plus/Minus
Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAG 794439
||||||||||| || |||||||||||||| ||||||| | ||| ||| ||||| |||
Sbjct 324 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAG 265
Query 794440 ATGCCCTCGACGGCGGC-AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTT 794498
|| |||||||||||||| ||||| | ||| || | |||| |||| | | ||| |
Sbjct 264 ATACCCTCGACGGCGGCGAAAGCAATCAAGCGGC-AGCCAAA--TGTCGA-GTCCTTGTC 209
Query 794499 GTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558
| ||||||||| | ||||| || |||||| || | | | || | ||||||||||
Sbjct 208 GCAGATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATGGC 149
Query 794559 GCGAAAGAGGT-GGTCC--TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615
| ||||||| ||| | | || | || || | | ||| ||||||||||| | ||
Sbjct 148 GTTGAAGAGGTAGGTACGTTGCTTG---GGCTCGCTAATGTATGTGTCGATGAGCAATGA 92
Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
||| ||||| ||||||||||| || || ||| ||||| || || || ||
Sbjct 91 GTAAGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAACA 41
>seq3771
Length=67810
Score = 143 bits (158), Expect = 4e-28
Identities = 175/239 (73%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||||| |||||||| ||||| || ||||||||| |||| || || || |||
Sbjct 26246 TGAACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCGAGCTCCCCTGGCA 26305
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||| || ||||| |||||||| | | ||| ||| |||||| ||
Sbjct 26306 AGACGAGGCGCACCGCCGTCTGAATCTCGCGCGAGGTGATGGTGGGCTTCTTGTTGTAGC 26365
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||| | ||| |||| |||||||||| || |||||
Sbjct 26366 GGGCGAGCTTGGAGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAACTGTTCA 26425
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||| | ||| ||||||| || | ||| ||||||||||||||||||||||||
Sbjct 26426 TGATGCCCATGGCCTTGCTGGAGATCCCGATGTCAGGGTGCACCTGCTTGAGCACCTTG 26484
>seq57182
Length=7782
Score = 141 bits (156), Expect = 1e-27
Identities = 174/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| |||| ||||||| ||| || || ||| | |
Sbjct 3134 GTACTTGGTGACGGCCTTGGTACCCTCGGAGATGGCGTGCTTGGAGAGCTCTCCGGGGAG 3193
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|| || || ||||| ||||||||||| || | || ||| || |||||| || |
Sbjct 3194 AATGAGACGGACGGCAGTCTGGATCTCACGCGAGCTGATGGTCGACTTCTTGTT-GTAGG 3252
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | ||| | |||| ||||| || |||||||| |
Sbjct 3253 CGGCGAGCTTGGAGGCCTCGGCGGCGACCTGCTCGAAGATGTCCGAGATGAACGAGTTGA 3312
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||| | |||||| ||| ||||||| || |||||||||||||||||| || ||
Sbjct 3313 GGATGGCCATCGACTTGGTGGAGATACCAGTGTCGGGGTGCACCTGCTTCAGGAC 3367
>seq29405
Length=15017
Score = 132 bits (146), Expect = 8e-25
Identities = 109/133 (82%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
||||| ||| | |||||||| ||||||||| | ||||||||| | || ||||| | ||
Sbjct 11578 CTCTTCGAGATCATCCTCGCTGCCAACTACATGGACATCAAGGCTCTTCTCGACGTCGGC 11519
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
||||||||||| || ||| | ||||||||||||||||| ||||| || || ||||||||
Sbjct 11518 TGCAAGACCGTCGCAAACATGATCAAGGGCAAGTCGCCTGAGGAGATTCGTAAGACCTTC 11459
Query 2035749 AACATCAAGTACG 2035761
|||||| || |||
Sbjct 11458 AACATCCAGAACG 11446
>seq1820
Length=72636
Score = 132 bits (146), Expect = 8e-25
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||||||||||||||| ||||| || ||||||||| |||| || || ||| ||| |
Sbjct 18923 ACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCGAGCTCACCGGGCAGCA 18864
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592
|| ||||||||||||||||||||| || | || ||| |||||| |||||
Sbjct 18863 CCAAGCGCACGGCGGTCTGGATCTCCCGCGAAGTAATGGTGGGCTTCTTGTTGTAGCGCG 18804
Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652
| || | | || ||| | | | |||| |||||| ||| || |||||| |
Sbjct 18803 CGAGCCTGGAGGACTCCTGGGCAAGCTTCTCGAAGATGTCGCTGATGAAACTGTTCATAA 18744
Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
| ||||| ||| |||||| || ||||| |||||||| ||||| |||||||||
Sbjct 18743 TGCCCATCGCCTTGCCGGAGATCCCTACGTCCGGGTGCACTTGCTTCAGCACCTTG 18688
>seq7635
Length=94129
Score = 131 bits (144), Expect = 3e-24
Identities = 175/242 (72%), Gaps = 6/242 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||||| |||||||| ||||| ||||| |||||| |||||| || || |||
Sbjct 35710 TGAACTTGGTGACCGCCTTGGTCCCCTCAGAGACAGCGTGCTTGGCCAACTCACCAGGCA 35651
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT-- 1485587
| || || ||||||||||||||||| || | | ||| | | |||| ||| |
Sbjct 35650 GCACGAGACGTACGGCGGTCTGGATCTCCCGAGAGGTGATAG---TAGGCTTCTTATTGT 35594
Query 1485588 -GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
||| || || | | || ||| | ||| |||| |||||||||| || ||
Sbjct 35593 AGCGTGCAAGCCTGGAGGACTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAACTGT 35534
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
||||||| ||| | ||| ||||||| || | ||| ||||||||||||||||||||||
Sbjct 35533 TCATGATGCCCATGGCCTTGCTGGAGATCCCGATGTCAGGGTGCACCTGCTTGAGCACCT 35474
Query 1485707 TG 1485708
||
Sbjct 35473 TG 35472
Score = 120 bits (132), Expect = 5e-21
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534
|||||||| |||||||| ||||| ||||| |||||| |||||| || || ||| |
Sbjct 41022 TTGGTGACCGCCTTGGTCCCCTCAGAGACTGCGTGCTTGGCCAACTCACCAGGCAGCACG 40963
Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594
|| ||||| |||||||||||||| || | | ||| || |||||| ||| ||
Sbjct 40962 AGACGCACAGCGGTCTGGATCTCCCGAGGGGTGATAGTAGGCTTCTTGTTTTAGCGGGCA 40903
Query 1485595 AGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATC 1485654
|| | | || ||| | ||| |||| || ||||||| || |||||||||
Sbjct 40902 AGCCTGGAGGACTCCTGGGCGAGCTTCTCGAAGATATCGTTGATGAAGCTGTTCATGATG 40843
Query 1485655 GACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||| | ||| |||||| || | ||| ||||||||||||||||||||||||
Sbjct 40842 CCCATGGCCTTGCTGGAGAGCCCGATGTCAGGGTGCACCTGCTTGAGCACCTTG 40789
>seq65591
Length=6549
Score = 118 bits (130), Expect = 2e-20
Identities = 182/260 (70%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| ||||| | || |||| ||| ||||| ||||||||||| ||||| ||||| ||
Sbjct 3691 CTGGTCAACATATCTGGCAGTGTTGTTGAAGACACGGAGCATGGGAACAAGACCGTTCGA 3632
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||| | ||| | ||| || | ||| ||| | ||
Sbjct 3631 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGAATGCAGTGAGCGTTGAGACC 3572
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || || ||| ||||| | ||||| | || || || |||||||| || ||
Sbjct 3571 AATACCACCAGCGTTCTTCGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCATC 3512
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||||| || |||||||||| | ||| ||||| || | | || || | | |||||
Sbjct 3511 AATCGAATCATCCTTCATGTCGATCAGGAAGCATGAAGCGAGCTGAGGCTGGGGAGTGCC 3452
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
||| |||| || || ||||
Sbjct 3451 GGCGCTGAACAGAGTAGGCG 3432
Score = 87.8 bits (96), Expect = 3e-11
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936
|||| ||| |||| ||||| ||||| || || ||||||||||||||||||||| |
Sbjct 3827 TCCAGAGGGCGTAGAAGAGGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 3768
Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996
||||||| | ||| || || |||||||| ||||| |||||| || ||||| ||
Sbjct 3767 GGTCGAGGAAAGCGAAGACATCAGCGTGCCAAGGCTCGAGGTAGATAGCGAAGGCACCGG 3708
Query 2071997 TGCGCTTGCCGCCGCC 2072012
|||||| ||| ||
Sbjct 3707 GACGCTTGTTGCCACC 3692
>seq41724
Length=31058
Score = 116 bits (128), Expect = 6e-20
Identities = 165/229 (72%), Gaps = 10/229 (4%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | |||||| ||| ||| || |||||||| || |||||
Sbjct 25202 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCTCGCTT 25143
Query 794400 CTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||||||||| ||||| |||| || | | ||||||| ||||| ||||||||||||||
Sbjct 25142 CTTGAGCCAGAAGATCGAGGCAAAGGATC---CCGAGAAGAAGATACCCTCGACGGCGGC 25086
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516
||| | | ||| ||||||||||| ||| | | || | | ||||||| || ||
Sbjct 25085 AAATGCAATGAGTCGCTCGGCAAAGGTGGC---GTTCTTGTCGCTGATCCATCGCAGGGC 25029
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAAA 794564
||| || ||||||| | | || ||| | || |||| ||| |||||
Sbjct 25028 CCAGTCGGCCTTTTGCTTGACGACGGGGATGGTCTCGACTGCGTCGAAA 24980
Score = 113 bits (124), Expect = 7e-19
Identities = 223/325 (69%), Gaps = 4/325 (1%)
Strand=Plus/Minus
Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952
|| || |||||||| ||||| | || | |||||| ||||| |||||||||| ||
Sbjct 25522 ACTCCAGCCTTGGCGTACTCTGCGACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGA 25463
Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGC 794012
||| |||||| | || ||||||| | ||||||||||||| |||||
Sbjct 25462 CTGATGTTCTCCATAAAGTCAAAGGGGTTGGTGGCATTGTAGTGCTTCTCGTTGCCGAGG 25403
Query 794013 GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATG 794072
|| | ||||| |||||||||||| | || ||||| |||||||| || ||||||||
Sbjct 25402 GAGACGAGCAGTCGGTCGGCGACGTACTCGATGTATTGGCACATCAGCTTAGCGTTCATA 25343
Query 794073 CCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCG 794132
|||||||| | ||||| | ||| | | || | | ||||| | ||||||||
Sbjct 25342 CCGATGAGGGAGCAAGGCAGAGCATCGGTCAGGAAGGCCTGTTCGATGCCAACGGCCTCA 25283
Query 794133 ATGATGATCTGCCTGGGCA-CGTC-GGACGACGGCTTGTCGACGAGCATCGTGTAGAGCA 794190
||||||| ||| || || ||| || | || || | || || ||||||
Sbjct 25282 GTGATGAT-GGCCAGGACAGTGTCTGGGTGTGCCCTCTTCTTC-AGGTGGCTGAAGAGCA 25225
Query 794191 GGCAGGCAAAGTCGCAATGCAGACC 794215
|||||||||||||| ||||||||
Sbjct 25224 GGCAGGCAAAGTCGGTGTGCAGACC 25200
>seq26684
Length=48437
Score = 111 bits (122), Expect = 2e-18
Identities = 166/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 1485493 CCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGG 1485552
||||| |||| ||||||| ||| ||||| || ||| ||||| | ||||| ||||||
Sbjct 4770 CCCTCGGAGATGGCGTGCTTGGAAAGTTCACCAGGCAAGATCAACCTGACGGCAGTCTGG 4711
Query 1485553 ATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTG 1485612
|| || ||| | ||| || || ||||| | |||| | ||||||||
Sbjct 4710 ATTTCTCGGCTCGAGATGGTCGATCGGTTGTTGTAGACGGCCAATTTGGAAGCCTCGGTA 4651
Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672
|||| | |||| || ||| || || ||||||| ||| ||||| | |||||||||
Sbjct 4650 GCGATCCTCTCGAAGATATCGGCAACGAAAGAGTTCAAGATGGACATGGCCTTGTTGGAG 4591
Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAGTACGA 1485728
|| || ||||||||| ||||||||||| |||||||| | | || ||||| ||
Sbjct 4590 ATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAGATGTACGAGGAGTAAGA 4535
>seq335334
Length=149
Score = 107 bits (118), Expect = 3e-17
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 2071828 AGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCG 2071887
|||| |||||||||| | ||||||| ||| |||| |||| |||||| ||| ||
Sbjct 3 AGCGTCCAGTCGCCGTTGGCTTCCACGCGCTTCATGAACAAGTCGGGCGTCCAGAGGGCG 62
Query 2071888 TAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAG 2071947
||||| | ||||| || || | |||||||||||||||||||| |||| ||| || |
Sbjct 63 TAAAACAAGTCGCGGGCGCGCATTTCCTCCTTGCCGTGGTTCTTCTTCAAGTCCAGGAAT 122
Query 2071948 TCGACGAGGTCGGCGTGCCACGGCTCC 2071974
|||| | ||||||||||| ||||||
Sbjct 123 TCGAAAATATCGGCGTGCCAGGGCTCC 149
>seq37458
Length=1257
Score = 100 bits (110), Expect = 4e-15
Identities = 171/242 (71%), Gaps = 12/242 (5%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| |||||||| ||| |||| || || || ||| |
Sbjct 801 ACTTGGTTACGGCCTTGGTCCCCTCAGAGACGGCATGCTTGGCAAGCTCACCAGGCAGCA 742
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT----- 1485587
|||||||| || ||||||||||| |||| | |||||| |||||| ||
Sbjct 741 CGAGGCGCACAGCTGTCTGGATCTCCCGGGAGGTAATCGTGGGCTTCTTGTT-GTACCTG 683
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
||| ||| || || ||| | || | | | || | || ||||||| ||| |
Sbjct 682 GCGAGCCTGGAGG-ATTCCT--GAGCTAGCTTC--TCAAAGATATCGTTGATAAAGCTAT 628
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
|||| || ||| | ||| | ||||| || | ||| |||||||||||||| |||||||
Sbjct 627 TCATAATACCCATGGCCTTGCTAGAGATACCGATGTCAGGGTGCACCTGCTTAAGCACCT 568
Query 1485707 TG 1485708
||
Sbjct 567 TG 566
>seq524802
Length=367
Score = 98.7 bits (108), Expect = 2e-14
Identities = 180/264 (68%), Gaps = 0/264 (0%)
Strand=Plus/Minus
Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062
|| |||||||||||| || || | | ||||| ||| || | || ||||| ||
Sbjct 273 GATGGCAACATGCCCCACGTCATCATCTCGGGCATGCCTGGTATCGGAAAGACAACCTCG 214
Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122
||| ||| |||||| | | | || | ||| | | || ||||| ||||||||
Sbjct 213 ATCCTGTGTCTGGCGAGACAATTGCTTGGAGATGCCTACAAGGAAGCCGTCCTCGAACTG 154
Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTCG 2019182
|| || ||||||||||| || | || ||||| || | |||||| |||| |
Sbjct 153 AACGCCTCAGACGAGCGTGGTATCGATGTCGTCCGCAACCGTATCAAGGGCTTCGCTCAG 94
Query 2019183 AAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGC 2019242
|||| | || ||||| |||||||||| ||| || |||| |||||||| |||||| ||
Sbjct 93 AAAAAAGTCACACTGCCCGCCGGCCGCCAAAAGCTGGTCATTCTCGATGAAGCCGACAGC 34
Query 2019243 CTTACGTCGGCGGCCCAGCAGGCC 2019266
| || || | ||||| || |||
Sbjct 33 ATGACATCCGGCGCCCAACAAGCC 10
>seq360519
Length=156
Score = 96.9 bits (106), Expect = 5e-14
Identities = 74/88 (84%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
|||||||||| ||||||| ||||| |||| ||||||| |||| || |||||| | | ||
Sbjct 129 ACTTGGTGACACCCTTGGTGCCCTCCGAGATGGCGTGCTTGGCGAGCTCGCCGGGGAGGA 70
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
| ||||| ||||| ||||||||||||||
Sbjct 69 TGAGGCGGACGGCCGTCTGGATCTCGCG 42
>seq63223
Length=1149
Score = 96.9 bits (106), Expect = 5e-14
Identities = 151/210 (72%), Gaps = 7/210 (3%)
Strand=Plus/Plus
Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445
|| ||||||||| || || |||||||||||||| | |||| || || ||||||
Sbjct 626 TCGATCTTGGAGTCGTGGTCCGAGGCGCTCATCTTGCTGCCCTTT---AGACCGGGCACC 682
Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTG-GTCGCGCGC 2411504
| ||||| | || ||| ||||| ||| || ||| |||||| | | | || ||
Sbjct 683 ATTGGGTTCATCAAATGGGCCCGCTTCTTGTACCCTAGCTTGGGCAGGAGCGACTCG-GC 741
Query 2411505 AAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTG 2411564
||| | ||||||||||||||||| || || || ||| ||| ||||| |||| ||
Sbjct 742 AAAAGTGAAGATCTTGCGCTGGTCTACTCCACCGAATTGGAAGTCCACGTCTAGGTATTG 801
Query 2411565 CTCGTCGAGGGCCTGCATGAGC-GGGTAGA 2411593
||| ||||| ||||||| || | |||||||
Sbjct 802 CTCATCGAGTGCCTGCA-GACCGGGGTAGA 830
>seq29561
Length=3815
Score = 91.5 bits (100), Expect = 2e-12
Identities = 128/175 (73%), Gaps = 10/175 (6%)
Strand=Plus/Minus
Query 793973 GAACGGGTTGGCCGTCAGGTAGTGCTT---CTCGCACCCGAGCGACGCAAGCAGGCGGTC 794029
||| ||||||| | ||||| ||| ||||| | |||||| | |||||||||||
Sbjct 199 GAAGGGGTTGGTGGCTTGGTAGATCTTGGGCTCGC-CGAGAGCGAGG--AGCAGGCGGTC 143
Query 794030 GGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGG 794089
||||| || || ||||| || |||||||| ||||||||||||| || || |||
Sbjct 142 AGCGACAAACTCGATGTATTGACACATGAGCTTAGCGTTCATGCCGAGAAGAGCACAGGG 83
Query 794090 CAGCGACTCGCTGACA--AACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142
|| | | | |||| ||||||| |||||| |||| |||||| |||||||||
Sbjct 82 AAGAGCAT--CCGACAAGAACTCTTGCTCGATAGCGACAGCCTCGGTGATGATCT 30
>seq4923
Length=13098
Score = 87.8 bits (96), Expect = 3e-11
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| |||||||| ||| |||| || || || ||| |
Sbjct 2542 ACTTGGTTACGGCCTTGGTCCCCTCAGAGACGGCATGCTTGGCAAGCTCACCAGGCAGCA 2601
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573
|||||||| || ||||||||||| |||| | ||||||
Sbjct 2602 CGAGGCGCACAGCTGTCTGGATCTCCCGGGAGGTAATCGTG 2642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7857536684165685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |