Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq511598 100 3e-16 >seq511598 Length=303 Score = 100 bits (110), Expect = 3e-16 Identities = 202/292 (69%), Gaps = 16/292 (5%) Strand=Plus/Minus Query 147219 GATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTT--GTCCCGCAGTCCACG 147276 ||||| | | | |||||||| ||||||| || | ||||| | ||| ||| || Sbjct 291 GATAATCTCCTTGAGCTGGTCGACGCCCTTGCTCTGGTAGTCTCCGTCT-GCA-TCGGTA 234 Query 147277 TACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTT 147336 ||| ||| || || || ||||||||||||||||| || || ||||| || || || Sbjct 233 TACTCGGCACCGAAATGTCTCCACTGGAAGCCGTAGACGGGTCCCAGATCACC-----TT 179 Query 147337 CTGTGCGA----GAAGCCCGCCCG-CTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGA 147391 || |||| | || || | || ||||||||| | ||| || | | ||||||||| Sbjct 178 CTCTGCGGTGCTGCAGTCCCCTCGACTTGAGAAAGGCCTTGGATCCATTGCCGTCCCAGA 119 Query 147392 TGCCCACTCCCTTGG-CGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGC 147450 || | | || || | | || | || || || ||| |||| || |||||| ||| Sbjct 118 TGTGAA-TGTCTCGGTCTGTCAGGACTTTGGAATCTGTGCAGCCAGCGACGAACCACAGC 60 Query 147451 AGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 |||||||||| || || | ||||||||| | ||| || |||| ||||||| Sbjct 59 AGCTCCTCCATGACTCCTCGCCAAAAGACTCGCTTCGTCGTCAAGAGGGGGA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579462552756000