Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq23651 259 5e-64 seq65591 183 3e-41 seq29969 156 5e-33 seq58770 147 2e-30 seq25376 132 5e-26 seq39881 102 9e-17 seq1198 89.7 6e-13 seq41724 86.0 7e-12 seq21026 86.0 7e-12 seq14159 86.0 7e-12 >seq23651 Length=24420 Score = 259 bits (286), Expect = 5e-64 Identities = 517/763 (68%), Gaps = 10/763 (1%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGT----GAGACGTA 53250 ||||| ||||| | ||||| ||||| || || | | ||||| ||||| || Sbjct 17463 ATGCGTGTCGCTGTCGGTATTCACGGCGATGATGTC----GAGTCCGCCATCGAGACCTA 17518 Query 53251 CGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 | |||| ||| | | ||| |||||| ||||| |||| || || |||||| | || || Sbjct 17519 CAACTTGATGTCCGAGAAGACCTTTACCCACGCTTCGCCTACGCTCTTCAACTCGGGCAC 17578 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 |||| || | ||| |||||| |||| |||||||| ||||| ||||| || Sbjct 17579 ACCCAACCCACAACTTTCGTCGTGCTTCTTGGTCTGCATGAAGGACGACTCTATCGAGGG 17638 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 |||||||| ||||| ||| ||||||| ||||||||| | | || ||||||||| | Sbjct 17639 AATCTACGACACGCTGAAGACGTGTGCCATGATCTCCAAGACGGCCGGAGGTATCGGTCT 17698 Query 53431 CCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 | || | ||| |||| || | ||| || ||| || || ||||| ||| || | Sbjct 17699 CAACATCCACAACATCCGAGCTACCGGATCATACATCGCAGGAACCAACGGTGTCTCCAA 17758 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || ||||| || ||||| || || | ||||||||| || || || ||| ||||||| || Sbjct 17759 CGGTATCGTACCCATGCTGCGAGTGTACAACAACACTGCTCGCTATGTCGACCAGGGAGG 17818 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||||| || | || ||||||||| | ||||| |||||| | ||||| | || Sbjct 17819 CAACAAGCGTCCCGGTGCCTTTGCCATCTACATTGAGCCCTGGCACTCGGACATCTTTGA 17878 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TA 53669 ||| || || ||||| ||| || || | || ||| | || ||||| || || || Sbjct 17879 GTTCCTGGACCTGCGCAAGAACCACGGAAAGGAGGAGGTCCGAGCTCGTGAGCTCTTCTA 17938 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 | || || ||||| || ||||| || ||| | ||||| || | | || |||| | Sbjct 17939 C-GCCCTCTGGATCCCTGACCTGTTTATGAAGCGTGTGGAACAGAATGGCGACTGGTCAC 17997 Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGA 53789 | |||||||| ||||||||| || ||| | || ||||| |||||||| | | Sbjct 17998 TCATGTGCCCAGCCGAGTGCCCTGGTCTCGCTGAGGTGTACGGAGAGGAGTTCGAAGCCC 18057 Query 53790 TGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849 | || || |||| |||||| ||||| || | ||||||| | || | | Sbjct 18058 TCTACGAGAGCTACGAGAAGCAGGGCAAGGCCAAGAGGACGATCAAGGCTCAGAAGCTGT 18117 Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909 || | || ||||| || ||| ||||| || | || | ||| ||||||||| Sbjct 18118 GGTACGCTGTCCTCGAGGCTCAGACCGAGACCGGTAACCCCTTTATGCTGTACAAGGATG 18177 Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 | | |||| |||||||||||||||||| ||||| ||||| Sbjct 18178 CCGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCACGATCAA 18220 Score = 161 bits (178), Expect = 1e-34 Identities = 540/817 (66%), Gaps = 44/817 (5%) Strand=Plus/Plus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197 ||| |||||| | ||||||| || ||||||||| | ||| |||||||| Sbjct 18377 GAATCTGAACAAGATCATCGATGTCAACTACTACCCGGTGCCCGAGGCCAAGAAGTCCAA 18436 Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257 | |||| ||| ||||||||| ||||| | ||||| | ||||| |||||||| | Sbjct 18437 CTTCCGACACAGGCCCATCGGTATCGGAATCCAGGGTCTTGCCGATGCTTTCATGATCAT 18496 Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATT-AACCAGGACATCTTC-AGTCGC 55315 || || ||||| || || | || | |||| | ||| | | |||||| || | | Sbjct 18497 GGGCTTCCCCTTTGATTCTGCCGAGGC-CAAGAAGCTGAACGTGCAGATCTTCGAGAC-C 18554 Query 55316 ATCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAG 55375 |||||| || || |||||| ||||| | || ||| ||| || || | |||||| Sbjct 18555 ATCTACCACGCCGCACTCGAGCGATCGTGCGAGCTCGCTGAGAGGGACGGCGCTTACGAG 18614 Query 55376 ACGTTCCGTGATTCGCCAGC-TGACAAGG-GACTTCTCCAGTTCGATCTATGGGGCAAG- 55432 || | | | ||| ||||| | | ||| || || || | || | |||||| Sbjct 18615 ACCTACGAGGGTTCTCCAGCATCGCGAGGTGAG--CTGCAATATGACATGTGGGGCGTTA 18672 Query 55433 -----TCTGACCCCATGT--TTGACA-AGTTGAAGCATGACATTCACTTGTGGGGCCTAC 55484 || |||| | | | | | || ||||| | | ||| | | ||||| | Sbjct 18673 CCCCCTCGGACCTCTGGGACTGGGCTGAGCTGAAGGAGAAGATTGCCAAGCACGGCCTGC 18732 Query 55485 GCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACA 55544 ||||||| || ||| |||| || ||||| ||||| |||||| |||||||| ||||| || Sbjct 18733 GCAACTCGCTCCTCCTGGCACCCATGCCTACCGCCTCGACGTCTCAGATCCTGGGCTTCA 18792 Query 55545 ACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGT 55604 ||||| |||||||| ||||| ||||||||||| |||||| || || || |||| Sbjct 18793 ACGAGTGCTTCGAGCCCTACACTTCCAACATCTACACGCGCCGTGTGCTTGCTGGAGAGT 18852 Query 55605 TTGTCATGATCAACAA---GCACCT-CGTCAA--GGACCTGCAGAAGATCAACAAGTGGA 55658 || || | ||| || || ||| || || | ||| || || ||||| Sbjct 18853 TTCAGGTGGTGAACCCATGGCTGCTGCGTGAACTGGTCGAGCA--AGGTCT----GTGGA 18906 Query 55659 ACCCGCAGATCAAGA--CGGATATTGTGCGGA-ACGGGGGGTCCGTCCAGAATCTGGA-- 55713 || || |||| || || | || | |||| || || || ||||| || Sbjct 18907 ACGACACCATGAAGAACCGCATCAT---CGCACACGGTGGATCGGTTCAGAACGTGCCCG 18963 Query 55714 GATTCCTCTGC-GTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC 55772 | ||| | | | ||||| || | ||| ||| || ||||||||| | ||||||| Sbjct 18964 GCATCCCCGACAGGATCAAGAAGCTCTACAAGACTGTCTGGGAGATTTCGCAGAAGACCA 19023 Query 55773 TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCT 55832 | || |||||| ||| || |||||||| | ||| || || ||||| || |||||| Sbjct 19024 TCATCGACATGGCTGCCGACCGTGGTGCCTTTATCTGTCAATCACAGTCGCTCAACATCC 19083 Query 55833 TCATGGAGAATCCTTCAC---TGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGA 55889 | | | ||| ||| ||| || | ||| |||||||||||| ||||| |||||| Sbjct 19084 ACCTTTCGGCTCC--CACCTTTGGTCA-GCTGACCTCGATGCACTTCTACGGCTGGAAGC 19140 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 ||||||||||| ||||| ||||| ||||| ||||| Sbjct 19141 GAGGACTCAAGACTGGTATCTACTACCTGCGTACCCG 19177 >seq65591 Length=6549 Score = 183 bits (202), Expect = 3e-41 Identities = 353/510 (69%), Gaps = 8/510 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || || | || |||||||| || ||| | | || || | || || ||| Sbjct 3339 TCATGCGTGTTGCTGTTGGCATCCACGGCGAGGACATTGAGGC-TGCCATCGAAACATAC 3397 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 |||| ||| | |||||||| || |||||| |||| || ||||||| ||| || || Sbjct 3398 AACTTGATGTCGCTCAAGTACTTCACCCACGCCTCGCCTACTCTGTTCAGCGCCGGCACT 3457 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 || |||||| | | ||||||||| | | ||||||||||| ||||| || || Sbjct 3458 CCCCAGCCTCAGCTCGCTTCATGCTTCCTGATCGACATGAAGGATGATTCGATTGATGGT 3517 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| || |||||| || ||| ||||| ||| | |||||||| ||| || Sbjct 3518 ATCTACGACACCCTCAAGACCTGCGCCATGATCTCGAAGAACGCTGGTGGTATTGGTCTC 3577 Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || |||| | | ||||| | ||| | ||| || || ||||| | | | Sbjct 3578 AAC-GCTCACTGCATTCGTGCCACTGGCTCTTACATCGCTGGTACCAACGGTACCTCGAA 3636 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || | || || |||||||| |||||||||||||| ||| | || || |||||||||| Sbjct 3637 CGGTCTTGTTCCCATGCTCCGTGTCTTCAACAACACTGCCAGATATGTTGACCAGGGTGG 3696 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||||| || | ||||| |||||||||||||| |||||||| || | | | Sbjct 3697 CAACAAGCGTCCCGGTGCCTTCGCTATCTACCTCGAGCCTTGGCACGCTGATGTCTTCGC 3756 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668 || ||||| || || ||| || || | || ||| | || ||| || ||||| || | Sbjct 3757 TTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCG-TGCTCGCGACCTCTTCT 3815 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 || || || ||||| || || ||||||||| Sbjct 3816 AC-GCCCTCTGGATCCCCGATCTCTTCATG 3844 >seq29969 Length=80460 Score = 156 bits (172), Expect = 5e-33 Identities = 297/434 (68%), Gaps = 5/434 (1%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || || |||||||| ||||| |||| || | | || | | ||| | ||| || Sbjct 64620 CCGGTACCAATACCCTCAGCACCGTTCACCAAGACGAGTGGGATGGTAGGCATGTACCAC 64561 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | ||||||| || ||| ||| ||||||| |||| || || Sbjct 64560 TCGGGCTCGATGCTCTGACCGTCATCATTGAGGTAGTTGAGCAGAGCATCATCGGAAGGG 64501 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| | | ||| ||||| | | ||||| || ||||||| ||||||| Sbjct 64500 TGGAAGAGAGACCGGGTGATGGGTGCAATGTTCGTGAAGATATAACGAGCCGATGCAGCA 64441 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 ||||| ||||| || || ||||| ||||| ||| | ||| || || ||| | |||| Sbjct 64440 TCCTTACCACCCATCAGTCGAGTACCAAATTGACCATTGGGCAACAGGATGTTGATGTTG 64381 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGG--AGGCTCGCCTCAC 117449 || | |||||| ||| ||| || | | |||||||| | ||| || ||| ||||| Sbjct 64380 TTCGAGCCCACGTAGTCTTGGGCAAGGCCTACAATCGT--CATGGTCAGACTCTGCTCAC 64323 Query 117450 CATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTG 117509 |||| || || || | ||||| | ||| || || |||| || || ||||| || || | Sbjct 64322 CATGATGGTATGCTGAGTGCTCGGACACATAACCAGCCAATTGGGCGACCTTGATCTCAG 64263 Query 117510 ACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCAT 117569 | |||| || ||||| ||| | | || ||||| ||||||| |||||||||||| | Sbjct 64262 CCTTCAGCTTTCGCTTGAAGCAACCGAACATGACCTTACGCTGACCTGGCTTCAGACCGT 64203 Query 117570 CCGCCACGTGAGGG 117583 || ||| |||||| Sbjct 64202 CCACCA-TTGAGGG 64190 Score = 111 bits (122), Expect = 2e-19 Identities = 286/430 (67%), Gaps = 12/430 (3%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 |||||||| || ||||| |||||||| |||| | | || | |||| ||| || Sbjct 64620 CCGGTACCAATACCCTCAGCACCGTTCACCAAGACGAGTGGGATGGTAGGCATGTACCAC 64561 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 || ||||| | ||||||||||| | | ||| || | | | || || | || Sbjct 64560 TCGGGCTCGATGCTCTGACCGTCATCATTGAGGTAGTTGAGCAGAGCATCATCGGAAGGG 64501 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACG--CGTGAAGATGTATCGGGAGCTG--GC 152051 | ||| | || || || || | || | ||||||||| || || ||| | || Sbjct 64500 TGGAAGAGAGACCGGGTGATGGG--TGCAATGTTCGTGAAGATATAACG--AGCCGATGC 64445 Query 152052 CGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111 |||||||| ||||| ||| || || ||||| || ||| |||| |||| ||||| Sbjct 64444 AGCATCCTTACCACCCATCAGTCGAGTACCAAATTGACCATTGGGCAACAGGATGTTGAT 64385 Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTG--CAGACTCGCT 152169 |||||| | ||||||| | | || || | |||||||| | || ||||||| Sbjct 64384 GTTGTTCGAGCCCACGTAGTCTTGGGCAAGGCCTACAATCGT--CATGGTCAGACTCTGC 64327 Query 152170 TCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATG 152229 ||||| || || || || | ||||| | | || || ||||| || || ||||| || Sbjct 64326 TCACCATGATGGTATGCTGAGTGCTCGGACACATAACCAGCCAATTGGGCGACCTTGATC 64267 Query 152230 TCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAA 152289 || | | |||| || ||||| || || | || ||||| ||||| ||| |||| | Sbjct 64266 TCAGCCTTCAGCTTTCGCTTGAAGCAACCGAACATGACCTTACGCTGACCTGGCTTCAGA 64207 Query 152290 CCGTCCACCA 152299 |||||||||| Sbjct 64206 CCGTCCACCA 64197 >seq58770 Length=9062 Score = 147 bits (162), Expect = 2e-30 Identities = 181/243 (74%), Gaps = 7/243 (3%) Strand=Plus/Minus Query 55689 ACGGGGGGTCCGTCCAGAAT----CTGGAGATTCCT-CTGCGTCTCAAGGAGATTTACCG 55743 |||| || |||||||||||| |||| | | ||| | | | ||||||| ||| ||| Sbjct 5120 ACGGTGGATCCGTCCAGAATATCCCTGGTG-TCCCTGCCGAG-CTCAAGGCGATCTACAA 5063 Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 ||| || |||||||| |||||| | | || ||| | ||| ||||||||||| | Sbjct 5062 GACCGTCTGGGAGATCAGTCAGAAGGCTGTCATCGACCTCGCTGCCGATCGTGGTGCCTT 5003 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||||||||||| ||||| ||||| | | || || ||||| ||| |||||| Sbjct 5002 TATCGACCAGTCTCAGTCCTTGAACGTTCACTTGACCAACCCTTCCATGGGACAGTTGAC 4943 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 || |||||||||||||||||||||||||| |||||||| || |||||||| ||| |||| Sbjct 4942 TTCCATGCACTTTTACGGGTGGAAGAAGGGTCTCAAGACTGGAATGTACTACCTGAGGAC 4883 Query 55924 CCG 55926 || Sbjct 4882 TCG 4880 >seq25376 Length=12287 Score = 132 bits (146), Expect = 5e-26 Identities = 331/490 (68%), Gaps = 16/490 (3%) Strand=Plus/Minus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843 |||| |||||| || |||| | ||||||||| | || ||||| || | |||||| || Sbjct 9907 ATCAGTTCATTGGAGAACGTCAAGCCAGGCATTAACCCTCGCTTTTTTAGCCAAAATATT 9848 Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903 | ||||| || ||||||||| || ||||| || || ||||| || | || | | Sbjct 9847 GAGCAGAAACTCCCCGAGAAGAAGATCCCCTCGACGCAAGCGAAGGCAACGATCCGCTCC 9788 Query 74904 GCGAACGGTGCATCGGAA--GTC-ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGAC- 74959 || || ||| ||||| ||| ||||| | ||||| | ||| ||| || | | Sbjct 9787 GCAAA-GGTC--TCGGAGCCGTCGATCCAGCGGAGGGCCCACTGAGCCTTT--TTGGCCA 9733 Query 74960 CGCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGA 75018 |||| ||||| || ||||| || ||||| |||| |||||| | | |||||||| | Sbjct 9732 CGCAAGGGACGGTCTCGATTGCGTGGAACAGGCGGTTCTTCTCGACCGAATCCTTGATGT 9673 Query 75019 GCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTAC 75077 | |||| || || |||| |||| || || || ||| || ||| |||| | Sbjct 9672 AGGTCTCAAGCAAGAGGCTGTACATCTCGGAGTGGATGTTCTCAATGG-CGATCTGGAAG 9614 Query 75078 GCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATAT 75135 | ||||| | || || || || | ||| || ||||| |||| | | | | | Sbjct 9613 CCATAGAAGGCGCGTGCTTCGGCGACCTGGACCTCCTTCATGAAGCGGCC--GCCCAGGT 9556 Query 75136 TCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGC 75195 |||||| ||||||||||| ||||||||||| || || || || |||| ||||||| Sbjct 9555 TCTCCAAAACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGGC 9496 Query 75196 GCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGA 75255 |||| ||| || || || ||||| | |||||| | | ||||| |||||| Sbjct 9495 GCTCGTCGGGGGTTAGGTTTTCCCAGTGGCGGAGGTCCTGGGAGAGATCAACCTCCTCCG 9436 Query 75256 CCGTCCAGAA 75265 | |||||||| Sbjct 9435 CGGTCCAGAA 9426 >seq39881 Length=46483 Score = 102 bits (112), Expect = 9e-17 Identities = 175/245 (71%), Gaps = 12/245 (5%) Strand=Plus/Plus Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412 ||||| || |||||||||||||| | |||||| | |||||| |||||| | ||||| Sbjct 27823 GTACCAAACTGTCCACTCGGCTCAAGGAGGTTGATGTTGTTACTACCCACATAATTTTGC 27882 Query 117413 GCCAAGTTGACAATCGTACCTTGG--AGGCTCGCCTCACCATGGTGATACGCCGTCTGCT 117470 || | ||| || || || | || || | || |||||||| || || || | || Sbjct 27883 GCAAGACCGACGATAGT--CTGAGTTAGACTGACTTCGCCATGGTGGTAGGCAGTTTTCT 27940 Query 117471 CCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTG-A 117527 | | || || || |||||||| || ||||| || || |||| || ||||||||| | Sbjct 27941 CAGATACATAACCGGCCAGCTGTGCGACCTTGATTTCCTTGAC--AAGATTCTTCTTGAA 27998 Query 117528 GGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGA-GGGATC 117586 ||| ||| | || ||||| ||||||| || || || ||||| |||| ||| ||||| Sbjct 27999 AGCA-GCAAAGATGACCTTTCGCTGACCAGGTTTAAGCCCATCGGCCA-TTGACGGGATA 28056 Query 117587 GAACG 117591 || || Sbjct 28057 GATCG 28061 >seq1198 Length=91974 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 22932 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 22991 Query 79684 TGAGCTACGAAAGC 79697 |||||||||||||| Sbjct 22992 TGAGCTACGAAAGC 23005 >seq41724 Length=31058 Score = 86.0 bits (94), Expect = 7e-12 Identities = 168/248 (68%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081 ||||||| | || ||||| ||||| || || || ||| | | |||| | ||| Sbjct 24922 TGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGT 24863 Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCA 75141 |||| | |||||||| || ||| || || || || | ||| ||||| Sbjct 24862 AGAAGCATCGCGCCTCAGCGGCCTGGACTTCAGAAGAGAACCGCTCAACGAGGTTCTCGT 24803 Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCAT 75201 ||||||| ||||||||||||||||| || || || || ||| ||||| || || | Sbjct 24802 TGACGATACCGTCCGAGGCGGCGAAGAAGGCGAGAACGTGAGAGATGAAGTGACGTTCGT 24743 Query 75202 CGTCAGTGAG---TTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCG 75258 ||| |||| |||||||| || | || |||| | ||| || ||||||||| | | Sbjct 24742 TGTCGTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTCGATCTCCTCGGCAG 24683 Query 75259 TCCAGAAA 75266 |||||||| Sbjct 24682 TCCAGAAA 24675 >seq21026 Length=37964 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 21069 TGCTTTCATTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 21010 Query 79684 TGAGCTACGAAAGC 79697 |||||||||||||| Sbjct 21009 TGAGCTACGAAAGC 20996 >seq14159 Length=34307 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 12182 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 12241 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 12242 TGAGCTATGAAAGC 12255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543440791017000