Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq12300 87.8 2e-12 >seq12300 Length=44855 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| |||||||| || || ||||| || |||||||| ||| |||| ||| Sbjct 12833 AATGCAGATTTTTGTGAAGACTTTGACGGGAAAAACCATAACCTTGGAGGTTGAAAGTTC 12774 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| || ||| | | || || || || |||||||| ||| | || || || Sbjct 12773 GGATACTATTGACAATGTCAAGGCGAAGATACAAGACAAAGAGGGCATCCCACCAGACCA 12714 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||||||||||| | ||| || || || | |||||| | || | || ||||| || Sbjct 12713 GCAAAGGCTTATCTTTGCAGGAAAGCAGCTTGAAGATGGGAGGACCCTTGCTGATTACAA 12654 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| || || || ||||| || ||| | ||| |||| |||| ||||| Sbjct 12653 TATTCAGAAGGAGTCTACCCTTCATCTGGTGCTGCGCTTGCGGGGTGG 12606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418973902122040