Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq598 120 2e-22 >seq598 Length=3584617 Score = 120 bits (132), Expect = 2e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 101708 TGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATC 101767 |||||||| || ||| |||||||||| || ||||| || ||||| || ||||| | | Sbjct 904713 TGAGCATCCCCAATAATATGGATAAAATCACCAGGAACAAGATTGCACACGTGAGCGAGC 904772 Query 101768 ATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCT 101827 |||||||| | |||||| ||| |||||||||||| ||||| || | ||||| || ||| Sbjct 904773 ATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGGCCCATGTCTGCT 904832 Query 101828 GATCTTTGATACAGTTGACAGGAAAG 101853 || | ||||||| |||||| || || Sbjct 904833 GAACGCTGATACATTTGACACGAGAG 904858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361242641055944