Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1810 84.2 2e-11 >seq1810 Length=8348134 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATT 20456 || ||||| | |||||||| || ||| | ||| || ||||| ||||| ||| ||| | Sbjct 6693915 TTGATGGCACTTCCTCCATGCCACATGTT-TGCACAGTTTTATGTTGCAAATGGAGAACT 6693857 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 || |||||||||||||| || || || |||||||| || ||||| || || || ||||| Sbjct 6693856 TTCATGTCAAATGTATCAGCGCTCAGCCGATATGGGTCTCGGTGTACCGTTTAACATTGC 6693797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399174542333080