Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1604 84.2 5e-11 >seq1604 Length=1253100 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || || |||||||||| || ||||| || |||| ||| || ||| | ||| | Sbjct 403481 GATTTTGAATATGATTTCTTTGGATTTAAAACTCTTGAGAGATCATACCTCTTAAAAGTC 403422 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || || | || ||| | ||| |||||| ||||| | || ||||| || |||||| Sbjct 403421 CAAGGGAAAGTTGTTGAAAGGCCTCAACACATGCTGATGAGGGTAGCTGTTGGCATTCAC 403362 Query 248929 AAGGATGACATAGA 248942 |||||||| || || Sbjct 403361 AAGGATGATATTGA 403348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073739655163392