Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1810 136 8e-27 >seq1810 Length=8348134 Score = 136 bits (150), Expect = 8e-27 Identities = 151/198 (76%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 35518 AGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACC 35576 |||| ||||| |||||| || | || || ||| |||| ||||||||| |||||| | Sbjct 6693974 AGAATAATCCTGATGATCGACGAATCATAATGTCGGCTTGGAATCCTCCTGATCTTAAGT 6693915 Query 35577 TTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGT 35636 | ||||| |||||||||||||||||| ||| || |||||||| || ||||||||| | | Sbjct 6693914 TGATGGCACTTCCTCCATGCCACATGTTTGCACAGTTTTATGTTGCAAATGGAGAACTTT 6693855 Query 35637 CGTGCCAGTTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 | || || |||||||||| ||| || ||| || | || || || || || ||||| Sbjct 6693854 CATGTCAAATGTATCAGCGCTCAGCCGATATG--GGTCTCGGTGTACCGTTTAACATTGC 6693797 Query 35695 ATCATACTCTCTTCTGAC 35712 |||||||| ||||| || Sbjct 6693796 CTCATACTCCCTTCTTAC 6693779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989559351936520