Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1690 212 2e-49 seq861 154 6e-32 seq139 138 4e-27 seq204 129 2e-24 seq1328 127 8e-24 seq1502 116 1e-20 seq234 114 5e-20 seq1396 113 2e-19 seq1098 111 6e-19 seq1340 98.7 4e-15 seq793 98.7 4e-15 seq236 96.9 1e-14 seq1125 93.3 2e-13 >seq1690 Length=820647 Score = 212 bits (234), Expect = 2e-49 Identities = 849/1316 (65%), Gaps = 67/1316 (5%) Strand=Plus/Plus Query 451210 AGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCT 451269 ||| || || || || ||| ||| || ||| |||| ||||| || || |||||||| Sbjct 129599 AGTCAACTACAAGGGAGAAGAGAAACAATTCGCTGCTGAGGAAATCTCTTCCATGGTTCT 129658 Query 451270 TACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAAT 451329 | ||| ||| || | | ||| || |||| || | | | | || || | Sbjct 129659 CATTAAGATGCGTGAGATCGGTGAAGCTTACCTTGGCACTTCGATCAAGAACGCTGTGGT 129718 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 |||||||| ||||| |||||||| | || || ||||| || || || || || || Sbjct 129719 CACTGTTCCTGCTTACTTCAATGACTCTCAGCGTCAAGCTACAAAGGACGCTGGTGTGAT 129778 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 |||||||| |||||| | || || || || || || || || |||||| | || ||||| Sbjct 129779 CGCTGGTTTGAATGTTATGCGTATCATCAACGAGCCGACTGCTGCTGCTATTGCTTATGG 129838 Query 451450 ACTAGGAAAATCAAAAGAAACAGA-----AGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 || | || ||| || ||| |||||| ||| || | | |||||| ||||| Sbjct 129839 TCTTGACAAG--AAAGCAACCAGTGTTGGAGAAAAGAATGTTCTGATCTTTGATCTTGGT 129896 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| |||| | ||| |||||||||| || | ||||| || |||||| Sbjct 129897 GGTGGTACTTTTGATGTTTCTCTTCTTACAATTGAAGAAGGTATCTTTGAGGTGAAGGCA 129956 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTG 451624 || ||| ||||||||||| || ||||||||| ||||||| || |||||||| Sbjct 129957 ACAGCTGGAGATACTCATCTTGGTGGTGAAGATTTTGATAA--CA------GAATGGTTA 130008 Query 451625 AAAACTGATGTTCA----------ACGAA-AACTAAAAGTAGATATTTCTACTAACCAAA 451673 | ||| |||||| | ||| ||| | ||| |||||| ||||| | Sbjct 130009 ACCACT-TTGTTCAAGAGTTTAAGAGGAAGAACAAGAAG--GATATTAGCGGTAACCCGA 130065 Query 451674 AAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTTCAA--- 451730 ||| || || | | | |||| | || | ||| || | || || ||| | Sbjct 130066 GAGCTCTAAGGAGGTTGAGAACAGCTTGCGAGAGAGCAAAGAGAACTCTTTCTTCCACCG 130125 Query 451731 CACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGA---TTATGCTACTA 451787 | ||||| || || | ||||| | | |||| ||||| || |||||| | | Sbjct 130126 CGCAAACGAC---CATCGAGATTGACTCTCTGTTTGAAGGAATTGACTTCTATGCTCCAA 130182 Query 451788 CTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTAT---TTTTGCACGGGTAATGA 451844 |||||||||||| ||| ||| | | | | || ||| | | | || ||| Sbjct 130183 ---TTACCCGTGCTAGATTCGAA--GAGCTTAACATGGATCTCTTTAGGAAGTGT-ATGG 130236 Query 451845 AACCTGTTGATCAAGTAT-TACATGATTCTAAAATTAGTAAAGA-TAAAATTGATGAAAT 451902 | |||||||| |||| | | | |||| |||| | | | |||| | | |||| | Sbjct 130237 AGCCTGTTGA-GAAGTGTCTCCGTGATGCTAAGA-TGGACAAGAGCTCAGTCCATGATGT 130294 Query 451903 TGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTC----TT 451958 ||| ||||| || ||||||||||| || || ||| ||||| | | ||| | || Sbjct 130295 TGTTCTTGTCGGTGGTTCTACACGTATCCCCAAAGTTCAACAGCT----TCTCCAAGATT 130350 Query 451959 ATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTG 452018 || || ||| | || || ||| | || |||||||| || ||||||||||||| Sbjct 130351 TCTTCAATGGCAAAGAGCTCTGCAAGTCTATTAACCCTGATGAGGCCGTTGCATATGGTG 130410 Query 452019 CTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGT 452078 | || ||||| || || |||||||| ||| || |||| || | ||| |||| | Sbjct 130411 CAGCTGTTCAGGCTGCAATTCTAACCGGTGAAGGAAATGAGAAGGTTCAAGACCTTCTCT 130470 Query 452079 TAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATT 452138 | | ||||| |||||||| || || || |||||||||||||||| | ||||| | || Sbjct 130471 TGCTTGATGTCACACCTCTCTCACTCGGTCTTGAAACAGCTGGTGGTGTCATGACCACTT 130530 Query 452139 TAATTAAACGAGGAACTTCTATTCCTTGTAA-AAAGAGTCAAACATTTAGTACAGCAAGT 452197 | || || || || | ||||| || ||||| | | | | | || | | Sbjct 130531 TGATCCAAAGAAACACAACAATTCCGACCAAGAAAGA---ACAGGTCTTCTCCACTTATT 130587 Query 452198 --GATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAG 452255 || || || || || || || ||||| | ||||| || | || | || || Sbjct 130588 CAGACAATCAGCCCGGAGTGTTGATCCAAGTCTACGAAGGTGAGAGAGCTAGAACCAAAG 130647 Query 452256 ATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTC 452315 | || || || || |||| ||||| || ||||| ||| | || | Sbjct 130648 ACAACAACCTCCTCGGTAAATTCGAGCTTTCTGGAATCCCTCCAGCTCCACGCGGTGTCC 130707 Query 452316 CTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTG 452375 |||| || | || |||| |||| || || ||||| || ||||| ||| | | Sbjct 130708 CTCAGATCACTGTCTGCTTTGATATTGACGCCAACGGTATCCTAAATGTCTCTGCCGAGG 130767 Query 452376 AAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACCGTTTATCT 452434 | || | | ||| || |||| || || ||||| |||||||| || ||||| ||| Sbjct 130768 ACAAGACCACCGGACAA-AAGAACAAGATCACAATCACTAATGACAAGGGTCGTTTGTCT 130826 Query 452435 AAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 ||||| || ||||| || ||||| | ||||| || || | |||| || ||||| Sbjct 130827 AAAGACGAGATTGAGAAGATGGTGCAAGAAGCTGAGAAGTACAAGTCCGAGGATGA 130882 Score = 154 bits (170), Expect = 6e-32 Identities = 277/401 (69%), Gaps = 9/401 (2%) Strand=Plus/Plus Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || || || || |||||| ||| || ||| |||| || || || || |||||||| Sbjct 123812 GTCAACTACAAGGGTGAAGAGAAACAGTTCGCTGCTGAGGAGATCTCTTCCATGGTTCTC 123871 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGT-TCTCCAGTTACTGATGCAGTAAT 451329 | ||| ||| || | || || || ||||| |||| | ||| | || || | Sbjct 123872 ATTAAGATGCGTGAGATTGCTGAGGCTTACCTTGGTGTCTCGA-TTAAGAACGCCGTTGT 123930 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 || ||||| ||||| |||||||| | || || ||||| || || ||||| ||| ||| Sbjct 123931 CACCGTTCCTGCTTACTTCAATGACTCTCAGCGTCAAGCCACAAAGGATGCTGGAGTTAT 123990 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 |||||||||||| ||| | |||| || ||||| || ||||| |||||| | || || || Sbjct 123991 TGCTGGTTTAAACGTTATGAGAATCATCAATGAGCCGACAGCTGCTGCTATTGCCTACGG 124050 Query 451450 ACTAGGAAAATCAAAAGAAACA-----GAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 || | | | || || || | ||| || || | || | |||||| |||| Sbjct 124051 TCTTG--ACAAGAAGGCAACCAGCGTTGGAGAGAAGAACGTGTTGATCTTTGATCTTGGA 124108 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| ||| | ||| | |||||||| || | || || || |||||| Sbjct 124109 GGTGGTACTTTTGATGTCTCTCTTCTTACCATTGAAGAAGGTATCTTCGAGGTTAAGGCA 124168 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| ||| || |||||||| || ||||||||| |||| || Sbjct 124169 ACCGCTGGAGACACTCATCTTGGTGGTGAAGATTTTGACAA 124209 >seq861 Length=1651656 Score = 154 bits (170), Expect = 6e-32 Identities = 275/401 (69%), Gaps = 9/401 (2%) Strand=Plus/Plus Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 ||||| || || || ||| |||| |||||| |||||||||| || || ||| |||| Sbjct 576213 GTAAACTACAAGGGAGAAGATAAAGAGTTTGCTGCTGAAGAAATCTCTTCCATGATTCTC 576272 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 | || ||| || | || ||| || ||||| | | | | | || || | Sbjct 576273 ATCAAGATGCGTGAGATTGCTGAAGCCTACCTTGGTACCACGATCAAAAACGCTGTTGTA 576332 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 |||||||| ||||| |||||||| | || || || ||||| || ||||| || ||| Sbjct 576333 ACTGTTCCAGCTTACTTCAATGACTCTCAGCGTCAGGCAACGAAGGATGCTGGTGTCATT 576392 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||||| |||||| | || || || ||||| ||||| ||||||||| | || ||||| Sbjct 576393 GCTGGTTTGAATGTTATGCGTATCATCAATGAGCCTACTGCAGCTGCTATTGCTTATGGT 576452 Query 451451 CTAGGAAAATCAAAAGAAACA------GAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 |||| || || | ||| | || || ||| |||| | ||||| ||||| Sbjct 576453 CTAGACAA---GAAGGCGACAAGTGTTGGGGAGAAGAATGTTTTGATCTTTGACCTTGGT 576509 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || || |||| ||| | || | |||||||| || | |||||||| ||||| Sbjct 576510 GGTGGTACATTTGATGTCTCTCTTCTCACCATTGAAGAAGGTATCTTTGAAGTGAAGGCG 576569 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||| || |||||||| || ||||| ||| | || || Sbjct 576570 ACTGCTGGAGACACTCATCTTGGTGGTGAGGATTTCGACAA 576610 Score = 84.2 bits (92), Expect = 9e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 || || ||||| ||||||||||| ||||| || || || ||||||||||| | ||| Sbjct 576996 AACCCCGATGAGGCTGTTGCATACGGTGCAGCTGTCCAGGCAGCTATTCTCAGCGGTGAG 577055 Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110 | | | || || | |||| | || || | ||||| ||||| || ||||| || || Sbjct 577056 GGTAACGAGAAGGTTCAAGATCTCCTCTTGCTCGATGTCACACCACTTTCTCTCGGTCTT 577115 Query 452111 GAAACAGCTGGTGGAATGATGACT 452134 ||||| ||||| ||| | |||||| Sbjct 577116 GAAACCGCTGGAGGAGTCATGACT 577139 >seq139 Length=5440 Score = 138 bits (152), Expect = 4e-27 Identities = 365/551 (66%), Gaps = 10/551 (2%) Strand=Plus/Minus Query 451976 CTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCT 452035 ||||| |||||| |||| ||||||||||| ||||||||||| ||||| ||||| || || Sbjct 2429 CTATGCAAGAGCATAAACCCTGATGAAGCCGTTGCATATGGAGCTGCGGTTCAGGCTGCG 2370 Query 452036 ATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCT 452095 || || || ||| || ||| || | ||| | || | | ||||| || || Sbjct 2369 ATCCTTACTGGTGAAGGAAGTGACAAGGTCCAAGACCTCTTGCTTCTTGATGTTACGCCG 2310 Query 452096 CTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGA--A 452153 ||| ||||||| |||| ||||| ||||| |||||||| ||||| |||| | | Sbjct 2309 CTAAGTCTTGGAATTGAGACAGCCGGTGGGGTGATGACTGTGTTAAT--CCCGAGAAATA 2252 Query 452154 CTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAG-TGATAACCAACCAGGT 452212 | | |||||||||| ||| ||| || || | | | || || || ||||| Sbjct 2251 CGACGGTTCCTTGTAAGAAGGAGCAAGTGTTCTCCAC-GTATGCGGACAATCAGCCAGGC 2193 Query 452213 GTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGA 452272 || || ||||| | ||||||||||||||| | ||| ||| || || || | Sbjct 2192 GTTCTGATCCAAGTCTATGAAGGAGAACGTGCGAGGACCAAAGACAACAACCTTCTTG-- 2135 Query 452273 GAATTTACTCTTTCAA--ACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTA 452330 ||| | | |||| |||||||||| ||| | ||| ||||||||| | || Sbjct 2134 GAACCTTCGAGCTCAAGGGCATTCCTCCTGCCCCACGTGGAGTTCCTCAAATCAATGTTT 2075 Query 452331 CCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAA 452390 || ||| | ||||||||||| || | |||||| || | || ||| | |||| Sbjct 2074 GCTTTGACATCGATGCAAATGGGATCTTAAATGTGTCGGCGGAGGATAAAACCGCTGGTG 2015 Query 452391 AATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAA 452450 | | | | || || || || || |||||| | || |||||| || || || | Sbjct 2014 TAAAAAACCAGATCACGATCACAAACGATAAAGGAAGGTTGAGTAAAGAGGAGATAGAGA 1955 Query 452451 AAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAACAAGTTAGAAAACATGTTG 452510 | ||||| | || || || || | ||| | ||| ||||| ||||| | || | || | Sbjct 1954 AGATGGTGCAAGACGCTGAGAAGTACAAAGCTGAGGATGAGCAAGTGAAGAAGAAAGTGG 1895 Query 452511 AAGCTAAAAAC 452521 | ||||| ||| Sbjct 1894 AGGCTAAGAAC 1884 Score = 93.3 bits (102), Expect = 2e-13 Identities = 191/281 (68%), Gaps = 5/281 (2%) Strand=Plus/Minus Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 |||| || || || || || || ||| | || | || || || || || || ||| || Sbjct 3079 TTACGGTCCCGGCGTACTTTAACGATTCTCAGAGACAGGCTACGAAGGACGCTGGAGCTA 3020 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 || |||| | |||||| | || || || ||||| || || || || ||| |||| || | Sbjct 3019 TTTCTGGGCTCAATGTTTTGCGGATCATCAATGAGCCGACTGCTGCAGCTATAGCTTACG 2960 Query 451449 GACTAGGAAAATCAA---AAGAA-ACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 | || ||| || | | ||| || | || | || ||||| | || ||| | ||| Sbjct 2959 GTCT-GGACAAGAAGGGCACGAAGACCGGTGAGAGGAACATTTTGATTTTCGATCTCGGT 2901 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || ||||| |||| ||| | | | |||||||| || || |||||||| || || Sbjct 2900 GGTGGAACGTTTGATGTTTCGCTGTTGACGATTGAAGAAGGTGTTTTTGAAGTGAAAGCC 2841 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||||||||| || |||||||| |||| || Sbjct 2840 ACTGCCGGAGATACTCATCTTGGTGGTGAAGACTTTGACAA 2800 >seq204 Length=2333866 Score = 129 bits (142), Expect = 2e-24 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| || || || || || || || || || ||||||||||| Sbjct 1139135 AATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCATC 1139194 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | ||| || || ||||| ||||||||||| || || ||||| Sbjct 1139195 CGACACAATCGACAATGTGAAAGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGATCA 1139254 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||||| ||| | || |||||| | ||||| |||||||| | || ||||| || Sbjct 1139255 GCAACGTTTAATCTTCGCCGGAAAACAATTGGAAGACGGAAGAACACTCGCCGATTACAA 1139314 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | || || |||| ||||| || || | | || |||||| Sbjct 1139315 CATCCAGAAAGAATCAACTCTTCATTTGGTGCTTCGTCTTAGAGGA 1139360 >seq1328 Length=1576597 Score = 127 bits (140), Expect = 8e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || || || || |||||||| |||||| || Sbjct 272881 ATGCAAATCTTTGTAAAGACTCTTACGGGCAAGACCATAACTCTTGAGGTTGAAAGCTCC 272940 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | |||| ||| || ||||||||||||||||| ||||| || || Sbjct 272941 GACACAATTGACAATGTTAAGGCAAAGATCCAAGATAAGGAAGGAATCCCTCCGGACCAG 273000 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | ||||| | || ||||| ||||||||||| | |||||||| ||| | ||| Sbjct 273001 CAGAGACTTATTTTTGCCGGTAAACAGCTTGAAGATGGCCGTACTTTGGCTGATAACAAT 273060 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 ||| | ||||| |||| || ||||| || | || |||||||| | || || Sbjct 273061 ATTCAAAAGGAGTCAACCCTCCACTTGGTTCTTAGGTTGAGAGGAGATATGCA 273113 >seq1502 Length=857606 Score = 116 bits (128), Expect = 1e-20 Identities = 245/365 (67%), Gaps = 9/365 (2%) Strand=Plus/Minus Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGT 451306 || || || || || |||||||| || || ||| || | |||||| || |||| Sbjct 104429 GAGGAGATCTCGTCGATGGTTCTCACAAAGATGCGGGAGATCGCAGAAGCGTACCTTGGC 104370 Query 451307 TCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAA 451366 ||| | ||| |||| || |||| || || ||||||||||||||| | || || || Sbjct 104369 TCTTCGATTAAGAATGCTGTGGTTACCGTACCTGCTTATTTCAATGATTCTCAGCGTCAG 104310 Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || || || ||||| ||| ||| ||||| | ||||| | || || || ||||| || Sbjct 104309 GCGACAAAGGATGCTGGAGTTATCTCTGGTCTCAATGTGATGCGTATCATCAATGAGCCA 104250 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAA------TCAAAAGAAACAGAAGaaaaa 451480 || || ||||| | || ||||| || | ||| || | | | || || Sbjct 104249 ACTGCTGCTGCAATTGCTTATGGTCTTGACAAAAAGGCGTCGAGTG---TTGGCGAGAAG 104193 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 ||| || | | |||||||| || || || ||| |||| ||| | ||| | ||||| Sbjct 104192 AATGTTCTTATCTTTGATTTGGGAGGTGGTACTTTTGATGTGTCTTTGCTTACGATTGAG 104133 Query 451541 GATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATT 451600 || || | ||||| || ||| | || |||||| || ||||| || ||||| ||| || Sbjct 104132 GAAGGTATCTTTGAGGTGAAGTCCACGGCTGGTGACACGCATCTTGGCGGTGAGGATTTT 104073 Query 451601 GATAA 451605 || || Sbjct 104072 GACAA 104068 >seq234 Length=2418110 Score = 114 bits (126), Expect = 5e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || || || || |||||||| ||||||||| || |||| |||| | | || Sbjct 146967 GTGCTGACCAAGATGAAAGAGACAGCAGAAGCTTACCTTGGAAAATCAGTCAAGAAGGCT 146908 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | |||||||| ||||| || |||||||| || |||||||||| |||||||| || Sbjct 146907 GTTGTCACTGTTCCAGCTTACTTTAATGATGCTCAGAGGCAAGCAACAAAAGATGCCGGG 146848 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||| | ||||| |||| || ||||||||||| || ||||||||| | Sbjct 146847 AGAATTGCTGGTCTCGATGTTGAGAGAATCATAAATGAACCTACGGCTGCTGCTCTATCC 146788 Query 451445 TATGGA 451450 |||||| Sbjct 146787 TATGGA 146782 >seq1396 Length=1446835 Score = 113 bits (124), Expect = 2e-19 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||| || || || ||| | || || || || Sbjct 400149 ATGCAAATTTTCGTCAAGACGTTGACTGGAAAGACCATCACTTTGGAGGTGGAGAGCTCC 400208 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | ||| |||||||| || ||||| || ||||| || || || Sbjct 400209 GACACCATCGACAATGTCAAAGCTAAAATTCAGGACAAGGAGGGTATTCCACCGGACCAG 400268 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || |||||||||||||| || ||||||||||| || || || Sbjct 400269 CAGAGATTGATCTTTGCTGGAAAACAACTTGAAGACGGCAGAACTTTGGCTGACTACAAC 400328 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | ||||| | ||||||||||| || || | ||| | ||| Sbjct 400329 ATTCAGAAGGAGTCTACACTTCACTTGGTCTTGCGTCTGCGTGGA 400373 >seq1098 Length=1074956 Score = 111 bits (122), Expect = 6e-19 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || || || |||||||| |||||||| ||| || | || | | || | || Sbjct 987927 GTCCTCACCAAAATGAAGGAAACAGCTGAAGCTTACCTCGGGAAATCTATCACCAAAGCT 987986 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || |||||||||| |||||||||||||||||||| | ||||| || || ||||| || Sbjct 987987 GTTGTTACTGTTCCAGCTTATTTCAATGATGCACAGAGACAAGCCACAAAGGATGCTGGG 988046 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 | ||||||||| | |||| | | || || || ||||||||||| ||||| ||| || Sbjct 988047 AAAATTGCTGGTCTTGATGTCCAGAGGATCATCAACGAACCTACAGCTGCTGCACTATCA 988106 Query 451445 TATGGACTAGGAAAATCAAA 451464 ||||| || ||| | |||| Sbjct 988107 TATGG--TATGAACAGCAAA 988124 >seq1340 Length=1566820 Score = 98.7 bits (108), Expect = 4e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 || ||||| |||||||| ||||| | || ||||| ||||||||| | || || |||| Sbjct 237058 ATAGGAATAGATCTTGGTACCACTTACTCTTGTGTTGGTGTTTACAAGAACGGCCATGTT 236999 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 ||||| || || |||||||||||| || | ||| ||||| ||||| |||| || || Sbjct 236998 GAAATCATTGCCAATGACCAAGGAAACCGTATTACACCTTCCTGGGTGGGTTTCACTGAC 236939 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA 451065 || || || | | || |||||||||| Sbjct 236938 TCCGAGAGGTTGATTGGTGAAGCTGCTAA 236910 >seq793 Length=772624 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||||||| || || |||||| | || ||||| ||| Sbjct 610935 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 610994 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | ||| ||| || || || ||||||||||| ||||| || || Sbjct 610995 GATACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 611054 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || || |||||||| ||||||||| | || || || || Sbjct 611055 CAAAGGCTCATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAAC 611114 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 611115 ATCCAAAAGGAATCGACCCTTCAC 611138 >seq236 Length=1640546 Score = 96.9 bits (106), Expect = 1e-14 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || || || || || || || || || || || || Sbjct 1089035 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAGTCCTCA 1089094 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | ||| || || ||||| ||||||||||| || || || || Sbjct 1089095 GACACCATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAG 1089154 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || |||||| | |||||||| || ||||| || | ||| | || || || || Sbjct 1089155 CAGCGATTGATTTTCGCCGGGAAACAGCTCGAAGACGGCCGCACTCTCGCCGACTACAAC 1089214 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| |||| ||||| Sbjct 1089215 ATCCAGAAGGAATCAACGCTTCA 1089237 >seq1125 Length=2998257 Score = 93.3 bits (102), Expect = 2e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || || || || || || || || || || || ||| Sbjct 292975 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGTCTTCT 292916 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || || ||||||||||| || || || || Sbjct 292915 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCGGACCAG 292856 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || |||||| | || || || || ||||| ||| |||| || || || || || Sbjct 292855 CAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGAACCTTAGCCGACTACAAC 292796 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| |||| |||||| Sbjct 292795 ATCCAGAAGGAATCAACGCTTCAC 292772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975669189793952