Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq178 138 1e-27 >seq178 Length=2153606 Score = 138 bits (152), Expect = 1e-27 Identities = 138/178 (78%), Gaps = 1/178 (1%) Strand=Plus/Plus Query 165117 TTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGC 165176 || ||| || |||||||||||||||||| || |||||| | ||||| || ||||| Sbjct 356578 TTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAACTCCTGTTGCAGCTGC 356637 Query 165177 TGCC-GCAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTC 165235 | || |||||| || ||||||| | || || || ||||| |||||||||||||||| Sbjct 356638 GACTTGCTGTTTTCTTGATCTATCCAATTGGGCAGGGAAGTTTTTCTGATGGTATGCCTC 356697 Query 165236 TTGGTATCTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCT 165293 | || |||||||||||||| |||| |||| | || |||| || || || |||||||| Sbjct 356698 TAGGAATCTCTGGTACTTTCAACTTTATGATTGTACTCCAGGCTGAGCACAACATTCT 356755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563647103042560