Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1690 260 9e-64 seq861 172 4e-37 seq139 172 4e-37 seq793 131 1e-24 seq1502 109 4e-18 seq1396 109 4e-18 seq1328 100 2e-15 seq234 98.7 6e-15 seq1480 96.9 2e-14 seq1340 91.5 1e-12 seq204 91.5 1e-12 seq1098 89.7 3e-12 seq1489 87.8 1e-11 >seq1690 Length=820647 Score = 260 bits (288), Expect = 9e-64 Identities = 559/818 (68%), Gaps = 18/818 (2%) Strand=Plus/Plus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 ||||||||||||||| | |||||||||||||||||||||||||| ||| | || | || Sbjct 129954 GCAACAGCTGGAGATACTCATCTTGGTGGTGAAGATTTTGATAACAGAATGGTTAACCAC 130013 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTT-CAACATCTGCTAAAGCA 475480 | |||| |||| || |||||||| || || ||| || | | | | | ||| Sbjct 130014 --TTTGTTCAAGAGTTTAAGAGGAAGAACAAGAAGGATATTAGCGGTAACC-CGAGAGCT 130070 Query 475481 TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAA 475540 |||| | | ||||| ||||| || | || ||| || |||||||||| | | ||| Sbjct 130071 CTAAGGAGGTTGAGAACAGCTTGCGAGAGAGCAAAGAGAACTCTTTCTTCCACCGCGCAA 130130 Query 475541 ACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGG 475600 || || | || |||| ||||| |||||||||||||| | || ||| ||||| | Sbjct 130131 ACGACCATCGAGATTGACTCTCTGTTTGAAGGAATTGACTTCTATGCTCCAATTACCCGT 130190 Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 |||| ||| ||||| || ||||||||||| || || || || |||| | || Sbjct 130191 GCTAGATTCGAAGAGCTTAACATGGATCTCTTTAGGAAGTGTATGGAGCCTGTTG-AGAA 130249 Query 475661 GT-TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGTAGGAG 475718 || |||| | ||| |||| | ||||| | | | ||||||||| |||||||||| || | Sbjct 130250 GTGTCTCCGTGATGCTAAGATGGACAAGAGCTC-AGTCCATGATGTTGTTCTTGTCGGTG 130308 Query 475719 GTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-TTTAATGGTAAAAAG 475777 |||| ||| | || || ||| | | | | | | || || | || ||||| ||| || Sbjct 130309 GTTCTACACGTATCCCCAAAGTTCAACAGCTTC-TCCAAGATTTCTTCAATGGCAAAGAG 130367 Query 475778 TTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 | || |||| || || |||||||| || ||||||||||| || ||||| || || | Sbjct 130368 CT--CTGCAAGTCTATTAACCCTGATGAGGCCGTTGCATATGGTGCAGCTGTTCAGGCTG 130425 Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTG-TTGACGTAACT 475894 | ||| || | ||| || | | ||||| | | | || | |||| |||| || || Sbjct 130426 CAATTCTAACCGGTGAAGGAAATGAGAAGGTTCAAGACCTTCT-CTTGCTTGATGTCACA 130484 Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAAT 475954 || || ||| | ||||||||||||| ||| || | ||||| | | | || | ||||| Sbjct 130485 CCTCTCTCACTCGGTCTTGAAACAGCTGGTGGTGTCATGACCACTTTGATCCAAAGAAAC 130544 Query 475955 ACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 || | || || ||| ||| | | || || ||||||||||| || ||||| | Sbjct 130545 ACAACAATTCCGACCAAGAAAGAACAGGTCTTCTCCACTTATTCAGACAATCAGCCCGGA 130604 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| ||| |||||||| ||| || ||||| || ||| || || Sbjct 130605 GTGTTGATCCAAGTCTACGAAGGTGAGAGAGCTAGAACCAAAGACAACAACCTCCTCGGT 130664 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || | ||| || || ||||| ||||| | || || ||||| || || Sbjct 130665 AAATTCGAGCTTTCTGGAATCCCTCCAGCTCCACGCGGTGTCCCTCAGATCACTGTCTGC 130724 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 ||||||||||| || || ||||| || ||||| |||| Sbjct 130725 TTTGATATTGACGCCAACGGTATCCTAAATGTCTCTGC 130762 Score = 156 bits (172), Expect = 3e-32 Identities = 550/842 (65%), Gaps = 18/842 (2%) Strand=Plus/Plus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 ||||| ||| | ||| || | ||||| |||||||| | |||||||||||||||||| Sbjct 124142 GAAGAAGGTATCTTCGAGGTTAAGGCAACCGCTGGAGACACTCATCTTGGTGGTGAAGAT 124201 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457 ||||| || ||| | || | || | ||| |||| ||||||||||| | || | Sbjct 124202 TTTGACAACAGAATGGTTAACCAC--TTCGTTCAAGAGTTCAAGAGGAAGAGCAAGAAGG 124259 Query 475458 ATCTTTCAACATCTGCTAAAGCA-TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAG 475516 | || | | | | ||| ||| || || | |||||||| ||||| | || ||| Sbjct 124260 ACATTACTGGAAACCCAAGAGCTCTTAGGAGGT-TGAGAACTGCCTGTGAGAGAGCGAAG 124318 Query 475517 CGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATT 475576 | ||||||| || | |||| || || |||| | |||||||| | || || ||| Sbjct 124319 AGGACTCTTTCCTCCACCGCTCAGACCACCATTGAGATCGATTCTCTCTACGAGGGTATT 124378 Query 475577 GA-TTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635 || || || | | | || || | |||| |||||| || | ||||| || || Sbjct 124379 GACTTCTACTCCACC-ATCACCCGTGCTAGATTTGAGGAGCTCAACATGGATCTGTTCAG 124437 Query 475636 AAAAACAATTGAACCCGTTGAACAAGT-TCTCAGAGATTCTAAACTTGACAA-ATCACAA 475693 ||| || || || ||||| |||| |||| | ||| |||| | ||||| | ||| Sbjct 124438 AAAGTGTATGGAGCCAGTTGAG-AAGTGTCTCCGTGATGCTAAGATGGACAAGAGCACT- 124495 Query 475694 GTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTT 475753 ||||| || |||| ||||| || ||||| || | || || || | || ||||| Sbjct 124496 GTCCACGATGTTGTCCTTGTTGGTGGTTCCACCCGTATCCCTAAGGTTCAGCAATTGCTT 124555 Query 475754 TCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTT 475810 || | | || || || ||| || | || |||| || || |||||||| |||||| Sbjct 124556 -CAGGACTTCTTCAACGGCAAAGAGCTT--TGCAAGTCTATTAACCCTGATGAGGCTGTT 124612 Query 475811 GCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAAT 475870 || || || ||||||||||| | ||||||| | ||| || | ||||||| | | Sbjct 124613 GCCTACGGTGCTGCTGTCCAGGGAGCTATTCTCAGCGGTGAAGGAAACGAGAAGGTCCAA 124672 Query 475871 AATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATT 475930 || || || | | || || ||||| || || | ||||| ||||| | || || | Sbjct 124673 GATCTTCTATTGCTCGATGTCACTCCTCTCTCCCTTGGTCTGGAAACTGCCGGTGGTGTC 124732 Query 475931 ATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCC 475990 ||||| | | | || ||||| || | || ||| ||| || | | || || ||| Sbjct 124733 ATGACCACTTTGATCCCGAGAAACACGACCATTCCAACCAAGAAGGAACAGGTCTTCTCC 124792 Query 475991 ACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTC 476050 || || || || || ||| | ||| ||||| | | |||||||| ||| Sbjct 124793 ACCTACTCAGACAACCAACCTGGTGTGTTGATCCAGGTGTACGAAGGTGAGAGAGCCAGA 124852 Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || || || || ||| || || | || | || || || ||||| ||||| | Sbjct 124853 ACCAAGGACAACAACCTTCTCGGTAAATTCGAGCTATCTGGAATCCCTCCAGCTCCTCGC 124912 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || || ||||| || || ||||| ||||| || |||||||| ||||| || || Sbjct 124913 GGTGTCCCTCAGATCACTGTCTGCTTTGACATTGACGCCAATGGTATCCTTAACGTCTCT 124972 Query 476171 GC 476172 || Sbjct 124973 GC 124974 Score = 93.3 bits (102), Expect = 3e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 |||||||| || || || ||||| ||||| |||||||| || || || || || || Sbjct 129720 ACTGTTCCTGCTTACTTCAATGACTCTCAGCGTCAAGCTACAAAGGACGCTGGTGTGATC 129779 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | |||||| | ||||| || || || || || || || || ||||||||||| Sbjct 129780 GCTGGTTTGAATGTTATGCGTATCATCAACGAGCCGACTGCTGCTGCTATTGCTTATGGT 129839 Query 474866 CTTGATAAGAA 474876 ||||| ||||| Sbjct 129840 CTTGACAAGAA 129850 >seq861 Length=1651656 Score = 172 bits (190), Expect = 4e-37 Identities = 542/819 (66%), Gaps = 32/819 (4%) Strand=Plus/Plus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 || || |||||||| | |||||||||||||| ||||| || || ||| | || | || Sbjct 576567 GCGACTGCTGGAGACACTCATCTTGGTGGTGAGGATTTCGACAACAGAATGGTGAACCAC 576626 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTG-----CTAA 475476 | ||| |||| |||||||| || || || || || || | | | | Sbjct 576627 --TTTGTCCAAGAGTTCAAGAGAAAGAACAAGAAGGA-----CATCAGCGGGAACCCGAG 576679 Query 475477 AGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTAC 475536 ||| |||| | | |||||||| ||||| | || ||| | |||| || ||| | | Sbjct 576680 AGCTCTAAGGAGGTTGAGAACTGCCTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACGGC 576739 Query 475537 TCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTA 475595 ||| ||||| | ||| | || ||||| | || || |||| || || | ||| || | Sbjct 576740 TCAGACTACCATCGAAATCGACTCTCTATACGAGGGTGTTGACTTCTACT-CTCCAATCA 576798 Query 475596 CAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTG 475655 | | || | ||| || || || ||||| || ||||| || || || |||| Sbjct 576799 CCCGTGCCAGATTCGAGGAGCTTAACATGGATCTTTTCAGAAAGTGTATGGAGCCTGTTG 576858 Query 475656 AACAAGT-TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGT 475713 | |||| ||| | ||| |||| | ||||| | | || ||| |||| |||| ||||| Sbjct 576859 AG-AAGTGTCTTCGTGATGCTAAGATGGACAAGAACTCA-GTCGATGATGTTGTCCTTGT 576916 Query 475714 AGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAA 475773 || || ||||| | || || || | | || |||| | | || ||||| || Sbjct 576917 TGGTGGCTCAACCCGTATCCCCAAGGTCCAACAATTGCTCCTAGACTTCTTCAATGGCAA 576976 Query 475774 A-AAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCA 475830 || || || || | | || || ||||| ||||||||||| || || |||||||| Sbjct 576977 GGAACTT---TGCAAATCCATCAACCCCGATGAGGCTGTTGCATACGGTGCAGCTGTCCA 577033 Query 475831 AGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTT-GACG 475889 ||||||||| | ||| | ||||||| | | || | | |||| | || | Sbjct 577034 GGCAGCTATTCTCAGCGGTGAGGGTAACGAGAAGGTTCAAGATCTCCT-CTTGCTCGATG 577092 Query 475890 TAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTT-ATTGAC 475948 | || |||||||| | ||||||||||| | |||||| | |||||| |||| || | Sbjct 577093 TCACACCACTTTCTCTCGGTCTTGAAACCGCTGGAGGAGTCATGACT-GTCTTGATCCAG 577151 Query 475949 AGAAATACTCCTATCCCATGCAAAAAATCAA-AAGTATTTTCCACTTATTCTGATAATCA 476007 |||||||| | ||||| |||| || || |||| || || |||||||| || || || Sbjct 577152 AGAAATACAACCATCCC-CACAAAGAAGGAACAAGTCTTCTCAACTTATTCAGACAACCA 577210 Query 476008 AACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAA 476067 | | ||| |||||| ||| |||||| || ||| | || ||||| || ||| Sbjct 577211 ACCCGGTGTCTTGATCCAAGTCTATGAAGGCGAGAGAGCAAGAACCAAAGACAACAACCT 577270 Query 476068 ACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGA 476127 | || | || | ||| ||||| ||||| ||||| ||||| ||||||||||| Sbjct 577271 TTTGGGTAAATTCGAGCTTTCCGGTATCCCTCCAGCTCCAAGAGGTGTTCCTCAAATCAC 577330 Query 476128 AGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166 || ||| || |||||||| || ||||| || || || Sbjct 577331 TGTCTGTTTCGACATTGATGCGAACGGTATCCTCAACGT 577369 Score = 116 bits (128), Expect = 2e-20 Identities = 139/187 (74%), Gaps = 15/187 (8%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| || || ||||| ||||| ||||| ||||| || ||||| || ||| Sbjct 576333 ACTGTTCCAGCTTACTTCAATGACTCTCAGCGTCAGGCAACGAAGGATGCTGGTGTCATT 576392 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | |||||| | ||||| || ||||| || || ||||| || ||||||||||| Sbjct 576393 GCTGGTTTGAATGTTATGCGTATCATCAATGAGCCTACTGCAGCTGCTATTGCTTATGGT 576452 Query 474866 CTTGATAAGAATTCTGACAA---------AGAAGTAAATGTTTTAATCTTTGA---TTGT 474913 || || ||||| | ||||| ||||| |||||||| |||||||| | || Sbjct 576453 CTAGACAAGAAGGC-GACAAGTGTTGGGGAGAAG--AATGTTTTGATCTTTGACCTTGGT 576509 Query 474914 GGAGGTA 474920 || |||| Sbjct 576510 GGTGGTA 576516 >seq139 Length=5440 Score = 172 bits (190), Expect = 4e-37 Identities = 546/833 (66%), Gaps = 19/833 (2%) Strand=Plus/Minus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 ||||| ||| |||| || | ||| || || |||||| | ||||||||||||||||| Sbjct 2867 GAAGAAGGTGTTTTTGAAGTGAAAGCCACTGCCGGAGATACTCATCTTGGTGGTGAAGAC 2808 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457 ||||| || |||||||| | ||| | |||| || || ||||||||| | || | Sbjct 2807 TTTGACAACAGACTTGTGAACCAT--TTCGTTGCGGAGTTTAAGAGGAAACACAAGAAGG 2750 Query 475458 ATCTTTCAACATCTGCTAAAGCA-TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAG 475516 || || ||| | ||| || || || | || || |||||||| | || ||| Sbjct 2749 ATATTGGTGGGAATGCGAGGGCACTTCGGAGGT-TGAGGACGGCTTGTGAGAGAGCAAAG 2691 Query 475517 CGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATT 475576 || | ||||| || | |||| || ||| |||| ||||||| | ||| || ||| Sbjct 2690 AGAACGCTTTCATCCACAGCTCAGACGACTATTGAGATTGATTCGTTGCATGAGGGTATT 2631 Query 475577 GATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGA 475636 || | || | || || | || | ||||| || || ||| | || || Sbjct 2630 GACTTCTATGCGACGATCTCACGTGCGAGGTTTGAGGAGATGAACATGGATTTGTTCAGG 2571 Query 475637 AAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTC 475696 ||| || || || || || ||||||| | ||| | || || ||||| | | || Sbjct 2570 AAATGTATGGATCCTGTAGAGAAAGTTCTTAAAGACGCGAAGCTCGACAAGGCCCGGGTG 2511 Query 475697 CATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCA 475756 || || | ||||| || ||||| || || || ||||| ||||| || | ||||| | Sbjct 2510 CACGAGGTGGTTCTGGTCGGAGGATCGACGAGGATTCCGAAAATTC-AGCA--GCTTTTA 2454 Query 475757 TCATATTTT---AATGGTAAAAAGTTAAATGAAAGTG--TAAATCCTGATGAAGCTGTTG 475811 | |||| || || || || || || ||| | |||| ||||||||||| |||| Sbjct 2453 CAAGATTTCTTCAACGGGAAGGAGCTA--TGCAAGAGCATAAACCCTGATGAAGCCGTTG 2396 Query 475812 CATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATA 475871 ||||||||||||| || || || || || | | ||| || | || || | | Sbjct 2395 CATATGGAGCTGCGGTTCAGGCTGCGATCCTTACTGGTGAAGGAAGTGACAAGGTCCAAG 2336 Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 | | | ||| |||| || || || || | || |||| |||| || ||| | | Sbjct 2335 ACCTCTTGCTTCTTGATGTTACGCCGCTAAGTCTTGGAATTGAGACAGCCGGTGGGGTGA 2276 Query 475932 TGACTAATCTTATTGAC-AGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCC 475990 ||||| | ||| | | |||||||| | | || || || || |||| || ||| Sbjct 2275 TGACTG-TGTTAATCCCGAGAAATACGACGGTTCCTTGTAAGAAGGAGCAAGTGTTCTCC 2217 Query 475991 ACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTC 476050 || ||| | || ||||| || || |||||| ||| |||||| ||| | Sbjct 2216 ACGTATGCGGACAATCAGCCAGGCGTTCTGATCCAAGTCTATGAAGGAGAACGTGCGAGG 2157 Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || ||||| || ||| |||||||| || | || | || ||||||||||| || | Sbjct 2156 ACCAAAGACAACAACCTTCTTGGAACCTTCGAGCTCAAGGGCATTCCTCCTGCCCCACGT 2097 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAA 476163 |||||||||||||| | ||| ||||| || ||||||||||| | |||||| Sbjct 2096 GGAGTTCCTCAAATCAATGTTTGCTTTGACATCGATGCAAATGGGA-TCTTAA 2045 >seq793 Length=772624 Score = 131 bits (144), Expect = 1e-24 Identities = 171/233 (73%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||| ||||| || ||| || | || || ||||| ||||| Sbjct 611156 ACGAAGACGAAGGACAAGGTGAAGGGTCGATTCCTTTTGGATGTTGTAGTCAGCAAGAGT 611097 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||||| ||||| || ||||| || || | ||| || || ||||| ||||| Sbjct 611096 TCTTCCGTCTTCAAGCTGCTTACCGGCAAAGATGAGCCTTTGCTGGTCCGGAGGGATTCC 611037 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||| || |||||| |||||| ||||||||||||| | | | || | ||| Sbjct 611036 TTCCTTGTCCTGGATCTTTGCTTTGACGTTGTCAATAGTATCAGAGCTCTCAACCTCCAA 610977 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGA-ACGACATCTT 480781 ||||| || || || || |||||||| || || || || | || || |||| Sbjct 610976 -AGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATACCACCTCTT 610925 >seq1502 Length=857606 Score = 109 bits (120), Expect = 4e-18 Identities = 141/194 (73%), Gaps = 12/194 (6%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||| || || || ||||| ||||||||||| ||||| || || || |||| Sbjct 104356 ATGCTGTGGTTACCGTACCTGCTTATTTCAATGATTCTCAGCGTCAGGCGACAAAGGATG 104297 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| || | ||||| ||||| | ||||| || ||||| ||||| || || ||| Sbjct 104296 CTGGAGTTATCTCTGGTCTCAATGTGATGCGTATCATCAATGAGCCAACTGCTGCTGCAA 104237 Query 474855 TTGCTTATGGTCTTGATAA---------GAATTCTGACAAAGAAGTAAATGTTTTAATCT 474905 |||||||||||||||| || || | || | ||||| |||||| | |||| Sbjct 104236 TTGCTTATGGTCTTGACAAAAAGGCGTCGAGTGTTGGC-GAGAAG--AATGTTCTTATCT 104180 Query 474906 TTGATTGTGGAGGT 474919 |||||| |||||| Sbjct 104179 TTGATTTGGGAGGT 104166 >seq1396 Length=1446835 Score = 109 bits (120), Expect = 4e-18 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| |||||||| | || | | ||| || || ||||||||||| || ||||| | Sbjct 399875 AATATTGTAATCAGCCAACGTACGGCCATCCTCTAGCTGCTTTCCAGCGAAGATAAGCCT 399816 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 || ||||| |||||||| || ||||||||||| ||||| ||| || || || || Sbjct 399815 CTGCTGATCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCTTTAACGTTGTCGATTGT 399756 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| | | || ||||| ||||| || |||||||||||||||||||| || || Sbjct 399755 GTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTG 399696 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | || | ||||||||| || || || || || ||||| | ||| Sbjct 400370 ACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGT 400311 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| ||||||||||| ||||||||||| || | | || || || || ||||| || Sbjct 400310 TCTGCCGTCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGCTGGTCCGGTGGAATACC 400251 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| ||||| || ||||||| || || || || | | | | | | ||| Sbjct 400250 CTCCTTGTCCTGAATTTTAGCTTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCCAA 400191 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || | ||||| ||||||||||| Sbjct 400190 -AGTGATGGTCTTTCCAGTCAACGTCTTGACGAAAATTTG 400152 Score = 87.8 bits (96), Expect = 1e-11 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| ||||| | ||| | ||| ||||| || || ||||| || || ||||| || Sbjct 400783 TTATAGTCAGCCAAAGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGC 400724 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || |||||||| ||||||||||| || ||||| || || ||||| || ||| Sbjct 400723 TGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCA 400664 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | | | ||| ||| |||||||| || || | |||||| ||||| || || Sbjct 400663 GAGCTCTCCACCTCCAA-GGTGATAGTTTTGCCAGTCAAAGTCTTGACGAAGATCTG 400608 >seq1328 Length=1576597 Score = 100 bits (110), Expect = 2e-15 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| | |||||| | ||| | | ||||||||| || || || ||||||||||| | Sbjct 273063 AATATTGTTATCAGCCAAAGTACGGCCATCTTCAAGCTGTTTACCGGCAAAAATAAGTCT 273004 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 || || || ||||| ||||||||||| ||||| |||||| || ||| ||||| || Sbjct 273003 CTGCTGGTCCGGAGGGATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCAATTGT 272944 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | | | | ||||| || || || || || || |||||||| || || ||||| Sbjct 272943 GTCGGAGCTTTCAACCTCAAGAGTTATGGTCTTGCCCGTAAGAGTCTTTACAAAGATTTG 272884 >seq234 Length=2418110 Score = 98.7 bits (108), Expect = 6e-15 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 474687 CCAAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 |||| |||||| | || || |||| || |||||| || ||| | | || || | Sbjct 146960 CCAAGATGAAAGAGACAGCAGAAGCT--TACCTTGGAAAATCAGTCAAGAAGGCTGTTGT 146903 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||||||||||| || ||||||||| |||| | |||||||| |||||||| || ||||| Sbjct 146902 CACTGTTCCAGCTTACTTTAATGATGCTCAGAGGCAAGCAACAAAAGATGCCGGGAGAAT 146843 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||||| ||||| | || || |||||||| || || || || || | ||||| Sbjct 146842 TGCTGGTCTCGATGTTGAGAGAATCATAAATGAACCTACGGCTGCTGCTCTATCCTATGG 146783 >seq1480 Length=451505 Score = 96.9 bits (106), Expect = 2e-14 Identities = 201/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 475763 TTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCT 475822 ||| | |||||| || ||| | |||| || || || || |||||||| ||||| ||| Sbjct 430835 TTTGAAGGTAAAGAGCCAAACAAGGGTGTGAACCCCGACGAGGCTGTTGCTTATGGTGCT 430894 Query 475823 GCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGA-GAAACTAAATAATATTGTACT 475881 ||||| || | | |||||| || || | || || || ||| | |||| | || Sbjct 430895 GCTGTTCAGGGTGGTATTTTGAGCGGAGAAGGCGGTGATGAGACCAAAGA-TATTCTTCT 430953 Query 475882 TGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCT 475941 | |||| || | ||||| | || ||| |||| || || ||||| | ||||| || || Sbjct 430954 TCTTGATGTGGCGCCACTCACTTTGGGTATTGAGACCGTAGGAGGAGTGATGACAAAGCT 431013 Query 475942 TATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGA 476001 || ||||| || ||| ||| ||| ||||| |||| || | || || || Sbjct 431014 GATCCCGAGAAACACGGTTATTCCAACCAAGAAATCTCAAGTTTTCACAACGTACCAAGA 431073 Query 476002 TAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGA 476058 | || |||||||| | || || |||||||||||||||||| |||| || || Sbjct 431074 CCAGCAGACAACTGTCTCAATTCAGGTCTTTGAAGGTGAAAGAAGTCTCACCAAGGA 431130 >seq1340 Length=1566820 Score = 91.5 bits (100), Expect = 1e-12 Identities = 197/295 (67%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 |||| | ||| | ||||| | ||||| | || ||| |||| || || ||||| | | Sbjct 235455 ATATCCTTCTTCTGGACGTTGCGCCACTCACTTTGGGTATTGAGACTGTCGGAGGAGTGA 235396 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 |||| || || || ||||| || ||| ||| ||| ||||| | || || | | Sbjct 235395 TGACAAAGCTGATCCCGAGAAACACGGTTATTCCAACCAAGAAATCTCAGGTGTTCACGA 235336 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | || || | || || || || ||||||| |||||||||||||| ||| ||| Sbjct 235335 CATACCAAGACCAGCAGACCACCGTCTCCATCCAGGTCTTTGAAGGTGAACGAAGTCTCA 235276 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 | ||||| || || || | || | || | || || || || ||||| |||| Sbjct 235275 CCAAAGACTGTAGGCTGCTCGGGAAATTCGACCTCAACGGAATCCCACCAGCTCCAAGAG 235216 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166 || ||||| || |||||||| || || | || || ||||||||||| || || Sbjct 235215 GAACCCCTCAGATCGAAGTTACATTCGAAGTGGACGCCAATGGTATTCTCAACGT 235161 >seq204 Length=2333866 Score = 91.5 bits (100), Expect = 1e-12 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 480554 AAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCT 480613 |||||| || || | |||||| || |||||| | || ||||| || || ||||| Sbjct 1139354 AAGACGAAGCACCAAATGAAGAGTTGATTCTTTCTGGATGTTGTAATCGGCGAGTGTTCT 1139295 Query 480614 GTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTC 480673 ||||| | ||| ||||| || || || | |||||| ||||| || || |||||||| Sbjct 1139294 TCCGTCTTCCAATTGTTTTCCGGCGAAGATTAAACGTTGCTGATCCGGTGGGATTCCTTC 1139235 Query 480674 CTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGG 480732 ||||||||| ||||| ||| ||| || || || || | || | || || |||| Sbjct 1139234 CTTGTCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGATGATTCAA-CCTCTAGGG 1139176 Query 480733 TAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || || || || ||||| || || Sbjct 1139175 TTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTG 1139139 >seq1098 Length=1074956 Score = 89.7 bits (98), Expect = 3e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 290827 ACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGC 290886 |||||||| || || ||| ||||| ||||| || || || || ||||||||||| || Sbjct 988112 ACCATATGATAGTGCAGCAGCTGTAGGTTCGTTGATGATCCTCTGGACATCAAGACCAGC 988053 Query 290887 AATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGT 290946 |||||| | | ||| || || || | || |||||||| |||||||| || || || Sbjct 988052 AATTTTCCCAGCATCCTTTGTGGCTTGTCTCTGTGCATCATTGAAATAAGCTGGAACAGT 987993 Query 290947 AATAACAGCTTT 290958 || ||||||||| Sbjct 987992 AACAACAGCTTT 987981 Score = 86.0 bits (94), Expect = 4e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 ||||||||||||| ||||| |||||| | || | ||||| || || ||||| || | || Sbjct 987991 TTACTGTTCCAGCTTATTTCAATGATGCACAGAGACAAGCCACAAAGGATGCTGGGAAAA 988050 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 |||| |||||| |||| | || || || ||||| ||||| || ||||| | |||| Sbjct 988051 TTGCTGGTCTTGATGTCCAGAGGATCATCAACGAACCTACAGCTGCTGCACTATCATATG 988110 Query 474864 GT 474865 || Sbjct 988111 GT 988112 >seq1489 Length=1929495 Score = 87.8 bits (96), Expect = 1e-11 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 671100 AAATCCTGAATCCACAACATATTTTAAACCATCAATGGTCAATGAAGATTCAGCTACATT 671159 ||| |||| ||| |||||||| |||| |||||||||||||||||| | |||||| | ||| Sbjct 1148876 AAAGCCTGGATCAACAACATACTTTATACCATCAATGGTCAATGATGTTTCAGCGATATT 1148817 Query 671160 AGTTGCCATAACTAATTT 671177 ||||||| ||||| ||| Sbjct 1148816 TGTTGCCAGAACTACTTT 1148799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268095812407712