Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq178 105 8e-18 >seq178 Length=2153606 Score = 105 bits (116), Expect = 8e-18 Identities = 125/168 (74%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 8344 AGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGA 8403 |||||||| ||||| || |||| ||| | ||| ||||| || |||||||| || |||||| Sbjct 356755 AGAATGTTGTGCTCAGCCTGGAGTACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGA 356696 Query 8404 GGCATTCCATCAGAGAATGAACCCTGACCAAATGGATATACTAAGAACACTGCGA-AAGC 8462 ||||| |||||||| || ||||| |||| |||||| | ||||| || || | || Sbjct 356695 GGCATACCATCAGAAAAACTTCCCTGCCCAATTGGATAGATCAAGAAAACAGCAAGTCGC 356636 Query 8463 AGCAGATACTGGAGCACTATATGCTACACAGATCCATGGTCTCATACC 8510 ||| | || |||| |||||| ||| ||||| || | |||||| Sbjct 356635 AGCTGCAACAGGAGTTGAATATGCAACAGCAATCCAAGGACGCATACC 356588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615847434543680