Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq178 98.7 3e-16 >seq178 Length=2153606 Score = 98.7 bits (108), Expect = 3e-16 Identities = 125/171 (73%), Gaps = 1/171 (1%) Strand=Plus/Minus Query 26330 AGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGA 26389 || || || || || || |||| ||| | ||||||||| |||||||||||||| || ||| Sbjct 356755 AGAATGTTGTGCTCAGCCTGGAGTACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGA 356696 Query 26390 GGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACTGCGAG-AGC 26448 ||||| |||||| |||||| || || || | ||||| | ||||| || || || || Sbjct 356695 GGCATACCATCAGAAAAACTTCCCTGCCCAATTGGATAGATCAAGAAAACAGCAAGTCGC 356636 Query 26449 TGCGGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAG 26499 || | | || | || |||||||||| ||||| || | ||| || || Sbjct 356635 AGCTGCAACAGGAGTTGAATATGCAACAGCAATCCAAGGACGCATACCCAG 356585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147708590068480