Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq178 111 2e-19 >seq178 Length=2153606 Score = 111 bits (122), Expect = 2e-19 Identities = 129/173 (75%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 72595 CTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGC-ATTTGC 72653 || || ||| | |||||||| ||| ||||| ||| | ||||| | || || | |||| Sbjct 356585 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAACTCCTGTTGCAGCTGCGACTTGC 356644 Query 72654 AGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 72713 || ||| | | |||||| | || ||||| || |||||||||||||| ||||| || Sbjct 356645 TGTTTTCTTGATCTATCCAATTGGGCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 356704 Query 72714 CTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAA 72766 ||| ||||| |||||||| ||| | || |||| || || |||||||| |||| Sbjct 356705 CTCTGGTACTTTCAACTTTATGATTGTACTCCAGGCTGAGCACAACATTCTAA 356757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572859679171520