Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq971 86.0 6e-12 >seq971 Length=4928269 Score = 86.0 bits (94), Expect = 6e-12 Identities = 109/146 (75%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || |||||||||||||| |||||||| ||||| || || | | || || ||||||||| Sbjct 3107586 GACAAAGAGGGTATACCACCCGATCAACAAAGGCTGATATTTGCTGGTAAGCAACTCGAA 3107527 Query 25328 GATGATAGAAATGTCAGC-GATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||| | || | ||| |||||||| || || ||||| || || ||||| | || || Sbjct 3107526 GATGGCCG-AACCTTAGCGGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTCTT 3107468 Query 25387 AAGATTGAGAGGAGGAA-AATGATCA 25411 || | ||||| |||| ||||||| Sbjct 3107467 GAGGCTCAGAGGTGGAACCATGATCA 3107442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445083584206080