Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq598 82.4 9e-11 >seq598 Length=3584617 Score = 82.4 bits (90), Expect = 9e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 |||||| || | |||| | || || || |||||| || ||||| || || || || || Sbjct 904760 CACGTGAGCGAGCATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAG 904819 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 ||||||||| | || | ||| |||| || |||||||| ||||| || ||||| || || Sbjct 904820 GCCCATGTCTGCTGAACGCTGATACATTTGACACGAGAGTTCCCCTTCTGCCACATAGAA 904879 Query 147114 CTG 147116 ||| Sbjct 904880 CTG 904882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583473821241600