Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq178 136 5e-27 >seq178 Length=2153606 Score = 136 bits (150), Expect = 5e-27 Identities = 142/185 (77%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 179207 AACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCG 179266 ||||| || |||||| ||||||||||| ||||| ||||||||| || | || || | Sbjct 356571 AACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAACTCCTGTTG 356630 Query 179267 CTGCTGCGAGT-GCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCT 179325 | ||||||| | || || ||| | ||||||| | || || || ||| ||||||| | Sbjct 356631 CAGCTGCGACTTGCTGTTTTCTTGATCTATCCAATTGGGCAGGGAAGTTTTTCTGATGGT 356690 Query 179326 ATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAAC 179385 |||||||| || |||||||||||||| |||| ||| ||||| |||| || || |||||| Sbjct 356691 ATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTACTCCAGGCTGAGCACAAC 356750 Query 179386 ATCCT 179390 || || Sbjct 356751 ATTCT 356755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610314768990720