Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1639 86.0 7e-12 >seq1639 Length=5101707 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 59989 TAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGC 60048 ||||||| || || || ||||| |||||||||||||| || || | || ||||||| Sbjct 2279895 TAGCTTTCGCTTGTGTTGAAGGCATCTTCTTCTCTGGAAGCTTTTGCTCCATCTTCTGGC 2279836 Query 60049 TCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACG 60108 | || || || || |||||||| || | | |||||| ||||| |||| || || |||| Sbjct 2279835 TTAAGAAACGAGGTCTCATGCCTGGGTTAACTTTCTCAAACGAATTGATCTCACGAGACG 2279776 Query 60109 AGGGC 60113 | ||| Sbjct 2279775 AAGGC 2279771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548511470847360