Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1328 178 1e-39 seq793 170 2e-37 seq1396 165 9e-36 seq1125 158 1e-33 seq1208 145 9e-30 seq236 143 3e-29 seq861 131 2e-25 seq1177 113 5e-20 seq406 113 5e-20 seq1470 111 2e-19 seq971 105 8e-18 seq1639 91.5 2e-13 seq184 89.7 6e-13 seq234 87.8 2e-12 >seq1328 Length=1576597 Score = 178 bits (196), Expect = 1e-39 Identities = 178/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| ||||| || |||||||| || |||||||| || || | Sbjct 273109 ATGCAGATCTTTGTTAAGACTCTTACAGGGAAGACTATAACACTTGAGGTCGAA--AGCT 273166 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | || | ||||| || || || || || || ||||| |||||||||| Sbjct 273167 CAGATACCATCGATAACGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCAGACC 273226 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||| ||||||||||||||||||| |||||| || || || || | Sbjct 273227 AGCAGAGACTTATCTTTGCCGGTAAGCAACTCGAGGATGGTCGTACGCTTGCGGATTACA 273286 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || |||||||| || || | |||||||| ||||| Sbjct 273287 ACATCCAGAAGGAGTCAACTCTTCACCTTCTCCTTCGTCTTCGTGGTGG 273335 Score = 143 bits (158), Expect = 3e-29 Identities = 156/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| ||||| |||||||| || |||||||||||||| || | Sbjct 272881 ATGCAAATCTTTGTAAAGACTCTTACGGGCAAGACCATAACTCTTGAGGTTGA--AAGCT 272938 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| | ||||| || || || || ||||| ||||| ||||| |||| Sbjct 272939 CCGACACAATTGACAATGTTAAGGCAAAGATCCAAGATAAGGAAGGAATCCCTCCGGACC 272998 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || |||||||| ||||| || || || |||| ||||| | || || | | Sbjct 272999 AGCAGAGACTTATTTTTGCCGGTAAACAGCTTGAAGATGGCCGTACTTTGGCTGATAACA 273058 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 || | |||||||| || || || || Sbjct 273059 ATATTCAAAAGGAGTCAACCCTCCA 273083 >seq793 Length=772624 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| |||||| | ||||||||| | Sbjct 610935 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 610994 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | || || || || ||||||||||| ||||| ||||| |||||| Sbjct 610995 GATACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 611054 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||| |||||||| || || || | | || || || ||||| || Sbjct 611055 CAAAGGCTCATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAAC 611114 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || ||||| || ||| | |||||||| ||||| Sbjct 611115 ATCCAAAAGGAATCGACCCTTCACCTTGTCCTTCGTCTTCGTGGTGG 611161 >seq1396 Length=1446835 Score = 165 bits (182), Expect = 9e-36 Identities = 175/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | ||||| ||||| || || || ||||| ||| || | Sbjct 400833 ATGCAGATTTTCGTGAAGACTTTAACCGGGAAGACCATCACACTGGAGGTGGAG--AGCT 400890 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| || |||||||||| || ||||||||||| || || |||||||||| Sbjct 400891 CCGACACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCAGACC 400950 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||| || || |||||||| | ||| || || || ||||| | Sbjct 400951 AGCAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGACGGTCGCACACTGGCTGACTACA 401010 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| |||||||| || ||||| | ||| | ||||| || ||||| Sbjct 401011 ACATCCAGAAGGAATCGACCCTTCACTTGGTCCTCCGTCTCCGTGGTGG 401059 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || ||||| ||||| || | ||||| ||| | Sbjct 400605 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAAACTATCACCTTGGAGGTGGAGAGCTCT 400664 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || |||||||||| || ||||||||||| || |||||||| |||||| Sbjct 400665 GACACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 400724 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| || || || ||||||| ||| || | || |||||||| Sbjct 400725 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGCACTTTGGCTGACTATAAC 400784 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| | || | | ||||| ||||| Sbjct 400785 ATCCAGAAGGAGTCGACCCTTCACTTGGTGCTAAGGCTTCGTGGTGG 400831 Score = 147 bits (162), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| || || | ||||| ||| || | Sbjct 400377 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACCTTGGAGGTGGAG--AGCT 400434 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || ||||||| || |||||||| ||||| ||||| ||||| |||| Sbjct 400435 CAGACACCATCGACAACGTGAAGGCCAAGATTCAGGATAAGGAAGGAATCCCTCCGGACC 400494 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || ||||| || ||||| | ||||||| ||||||| | || || || | Sbjct 400495 AGCAGAGGTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTCGTACCTTGGCGGATTACA 400554 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| || || || || ||||| | |||||||||||||| ||||| Sbjct 400555 ACATCCAGAAAGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGTGG 400603 Score = 141 bits (156), Expect = 1e-28 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||||||| | || || ||||| || ||| | ||||| ||| || | Sbjct 400149 ATGCAAATTTTCGTCAAGACGTTGACTGGAAAGACCATCACTTTGGAGGTGGAG--AGCT 400206 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | || ||||||||||||||||||||||| ||||| || |||| Sbjct 400207 CCGACACCATCGACAATGTCAAAGCTAAAATTCAGGACAAGGAGGGTATTCCACCGGACC 400266 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || |||||||| || ||||| || || | | || | || ||||| | Sbjct 400267 AGCAGAGATTGATCTTTGCTGGAAAACAACTTGAAGACGGCAGAACTTTGGCTGACTACA 400326 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || ||||| || || ||||| | ||||||||||| || || || Sbjct 400327 ACATTCAGAAGGAGTCTACACTTCACTTGGTCTTGCGTCTGCGTGGAGG 400375 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||| |||||||| || || ||||| || | Sbjct 399693 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCTCT 399752 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || || || || || ||||||||||| |||||||| || ||| Sbjct 399753 GACACAATCGACAACGTTAAAGCCAAGATCCAAGACAAGGAGGGCATTCCTCCGGATCAG 399812 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || ||||| ||||| || ||||||| ||||| | || || || ||| Sbjct 399813 CAGAGGCTTATCTTCGCTGGAAAGCAGCTAGAGGATGGCCGTACGTTGGCTGATTACAAT 399872 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||||||||| || ||| | ||| | | || || ||||| Sbjct 399873 ATTCAGAAGGAATCCACCCTCCATTTGGTCCTAAGGCTCCGTGGTGG 399919 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || || || || |||||||| || || ||||| || | Sbjct 399921 ATGCAAATTTTCGTCAAAACCCTAACTGGGAAGACTATCACCCTCGAGGTGGAAAGCTCT 399980 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || ||||| || |||||||||||||| || || || || ||| Sbjct 399981 GACACAATCGACAACGTTAAAGCTAAGATCCAGGACAAGGAGGGTATCCCACCGGATCAG 400040 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || || |||||||||||||| | | ||||| || ||||| || Sbjct 400041 CAAAGATTGATCTTCGCCGGAAAGCAACTCGAGGACGGCAGAACCCTCGCTGACTACAAC 400100 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| || | | || || ||||| Sbjct 400101 ATCCAGAAGGAGTCAACCCTTCATCTTGTTCTCAGGCTCCGTGGTGG 400147 >seq1125 Length=2998257 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| || || || ||||| ||||| | Sbjct 292975 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGTCTTCT 292916 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || ||||||||||| ||||| || || |||||| Sbjct 292915 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCGGACCAG 292856 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || || ||||| ||||| || | || ||| |||| ||||| || Sbjct 292855 CAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGAACCTTAGCCGACTACAAC 292796 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || ||||| || ||| | ||||| || ||||| Sbjct 292795 ATCCAGAAGGAATCAACGCTTCACCTTGTCCTTCGTCTCCGTGGTGG 292749 >seq1208 Length=4595443 Score = 145 bits (160), Expect = 9e-30 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG---TCA 27462 |||||||| ||||| ||||| | ||| || ||||| |||||| | ||||||||| ||| Sbjct 3925807 ATGCAAATTTTTGTGAAGACCCGTACTGGAAAGACCATTACTTTGGAGGTTGAGGGCTCA 3925866 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | | | || | ||| | ||||| || ||| ||||||||||||| || || |||||| Sbjct 3925867 G---ACACAATCGATAATGTCAAGGCGAAGATTGAGGACAAGGAGGGGATCCCACCAGAC 3925923 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | || || ||| | |||||||| ||||| |||| || || || || || || Sbjct 3925924 CAGCAGAGACTCATCTTTTCCGGTAAGCAGCTCGAAGATGGACGCACACTCGCTGATTAC 3925983 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||||||||| || || || ||| | || | ||||| | ||||| Sbjct 3925984 AACATCCAAAAGGAGTCTACCCTCCATTTGGTGCTTCGTCTCGGAGGTGG 3926033 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || || || |||||||| |||||||| ||| | ||| | Sbjct 3925351 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGATAGAGAGCTCT 3925410 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||||| || |||||||||||||| | ||||||| |||||| Sbjct 3925411 GATACTATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGACATTCCTCAGGACCAG 3925470 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | |||| || || ||||| || || || ||| ||||||| | ||||| || || Sbjct 3925471 CAAAGATTAATCTTCGCCGGTAAACAGCTGGAAGATTGTCGTACCTTGGCAGATTACAAC 3925530 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| |||||||| || || || Sbjct 3925531 ATCCAGAAGGAATCAACGCTCCA 3925553 Score = 91.5 bits (100), Expect = 2e-13 Identities = 162/230 (70%), Gaps = 11/230 (5%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||| |||| ||||| ||||| || || ||||| || ||| | ||||| | | || | Sbjct 3926035 ATGTAAATTTTTGTGAAGAC-CTCACA---AAGACCATCACTTTGGAGGTCGGG--AGCT 3926088 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | ||| | |||||||| ||||||||||||||||| || || | |||| Sbjct 3926089 CAGACACAATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACAAGACT 3926148 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | ||| | || || || |||| || || || ||||||| | | || | || || || | Sbjct 3926149 AACAGAGACTCATCTTCGCTGTGAAACAGCTTGAGGATGGTTGGACTTTGGCTGATTACA 3926208 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||| | || |||||||| || | | | |||||| |||||| Sbjct 3926209 ACATCCAGAAGTAGTCGACTCTTCA-CT--TGGTTCTTCTTCGTGGTGGA 3926255 >seq236 Length=1640546 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| || || || ||||| ||||| Sbjct 1089035 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAGTCCTCA 1089094 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| |||| || || || || |||||||| ||||| || || |||||| Sbjct 1089095 GACACCATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAG 1089154 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || || || || ||||| || | || || || || ||||| || Sbjct 1089155 CAGCGATTGATTTTCGCCGGGAAACAGCTCGAAGACGGCCGCACTCTCGCCGACTACAAC 1089214 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || |||||||| ||| | ||||| || ||||| Sbjct 1089215 ATCCAGAAGGAATCAACGCTTCATCTCGTCCTCCGTCTCCGTGGTGG 1089261 >seq861 Length=1651656 Score = 131 bits (144), Expect = 2e-25 Identities = 125/159 (79%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535 ||||| ||||||| || |||||||||||||| ||||| | |||||| | ||| | || | Sbjct 430705 CAAATGTGAAGGCAAAGATTCAGGACAAGGAAGGAATCCAACCAGACGAACAGAGACTCA 430764 Query 27536 TTTTTGCTGG--TAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 | || |||| |||||| || ||||||| ||| || || |||||||| || | ||||| Sbjct 430765 TCTTCGCTGAACTAAGCAGCTTGAGGATGGTCGCACACTTGCAGACTACAACATTCAAAA 430824 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| | || ||||| || || ||||||||||| ||||| Sbjct 430825 GGAAACAACACTTCACCTTGTGTTGCGTCTTCGTGGTGG 430863 >seq1177 Length=2734319 Score = 113 bits (124), Expect = 5e-20 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || || || || ||||| || ||||||||||| ||| || | Sbjct 987727 ATGCAAATTTTCGTGAAAACACTAACTGGTAAGACCATCACTCTTGAGGTCGAG--AGCT 987784 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | ||||| || || ||||||||||| || |||||||| |||| Sbjct 987785 CCGACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCGGACC 987844 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | || || || ||||| || || || |||| || ||| | || || || | Sbjct 987845 AGCAAAGATTGATCTTCGCCGGTAAACAGCTAGAAGATGGCCGCACCTTGGCCGATTACA 987904 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 | |||| || ||||| || || || Sbjct 987905 ACATCCAGAAAGAATCAACCCTCCA 987929 >seq406 Length=3140938 Score = 113 bits (124), Expect = 5e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 |||||||| |||||||| || || || || ||| | || || ||||||||||| ||||| Sbjct 2970548 CAGGACAAAGAGGGAATACCACCTGATCAACAGAGGCTGATATTTGCTGGTAAACAACTT 2970489 Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 || |||| ||| || ||||| ||||| || |||| || || || ||||||||| | ||| Sbjct 2970488 GAAGATGGTCGAACACTAGCGGACTACAACATCCAGAAAGAGTCGACTCTTCATTTGGTC 2970429 Query 27616 TTGCGTCTTCGCGGTGG 27632 ||| | ||| | ||||| Sbjct 2970428 TTGAGGCTTAGGGGTGG 2970412 >seq1470 Length=2917085 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 7/228 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || ||||| || |||||| | |||||||| | Sbjct 2171760 ATGCAGATCTTTGTCAAGACTCTGACAGGCAAAACCATTACTTTGGAGGTTGAAAGCTCT 2171819 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || ||||||| || || ||||||||||| ||||| ||||| ||| Sbjct 2171820 GATACTATTGATAACGTGAAGGCAAAGATACAGGACAAGGAAGGAATCCCTCCGTTCCAT 2171879 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| |||| | | | || || | | || || || || || || Sbjct 2171880 CAGAGACTTATCTTTGCCGGTA--CTA-TTGATGACGGAAGGACTCTTGCTGATTACAA- 2171935 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || ||||| || |||||||| | || | |||||||| | |||| Sbjct 2171936 ---CAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGATGGA 2171980 >seq971 Length=4928269 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 |||||||| ||||| || || || || || || | || || |||||||||||||||||| Sbjct 3107589 CAGGACAAAGAGGGTATACCACCCGATCAACAAAGGCTGATATTTGCTGGTAAGCAACTC 3107530 Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 || |||| || ||| |||| || || || |||| || || || ||||||||||| ||| Sbjct 3107529 GAAGATGGCCGAACCTTAGCGGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTC 3107470 Query 27616 TTGCGTCTTCGCGGTGGA 27633 ||| | || | |||||| Sbjct 3107469 TTGAGGCTCAGAGGTGGA 3107452 >seq1639 Length=5101707 Score = 91.5 bits (100), Expect = 2e-13 Identities = 388/601 (65%), Gaps = 19/601 (3%) Strand=Plus/Minus Query 64258 GACCCAATTCTAACATCAAGCACAGCACGTTTTACAACTTTCCCAATTAGGTACCCTGAT 64317 || ||| |||||||| ||| | ||| | || | |||||||| ||||| || Sbjct 2280364 GAGCCACTTCTAACACCAACCCCAGACAGATTCTGTATGTTCCCAATCCACTACCCAGAG 2280305 Query 64318 TTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTC 64377 | |||||| | |||||||||||| ||| |||||||| | || || || ||||| Sbjct 2280304 ATCTGGGAGATGTACAAGAAAGCCGAAGCATCGTTCTGGACCGCTGAAGAAGTAGATCTA 2280245 Query 64378 GC-CAAGGATCTCAGCGACTGGGAAAAC---CTAAACTCACAG-GAACAGCACTTCATCA 64432 | |||| || |||| ||||| ||| || ||| || | |||| |||||||||| Sbjct 2280244 TCACAAGACAATC-GCGATTGGGAGAACAATCTCAACG-ACGGTGAACGTCACTTCATCA 2280187 Query 64433 AGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAAT-TTGGACCTA 64491 | ||||| || |||||||| || ||||||||| ||||| |||||| | | || Sbjct 2280186 AACACGTCCTCGCTTTCTTCGCCGCATCTGACGGAATCGTGTTAGAGAATCTCGCTTCTC 2280127 Query 64492 AATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCA----GGG 64547 | || | |||||||| || | |||||||| | ||||||| | || | | Sbjct 2280126 GA-TTCATGTCCGATGTTCAAGTCTCGGAGGCGCGTGCTTTCTATGGTTTCCAGATCGCG 2280068 Query 64548 ATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGA 64607 ||| |||| ||||| ||||| |||| ||| | | || | || | | || Sbjct 2280067 ATT----GAAAACATTCACTCCGAGATGTATAGTCTCCTTCTCGATACGTATATCAAAGA 2280012 Query 64608 TCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAA 64667 | |||| ||| || || | || || || || | || || | || || Sbjct 2280011 TAACAAAGAGAGAGATCATCTATTTCGCGCGATTGAAACGATTCCTTGCGTCGCGAAGAA 2279952 Query 64668 GGCTGAATGGGCCATCCGGTGGATGAATCGTGGGTC-GTCGTTTGGTCAGCGTCTCGCAG 64726 ||| | ||||| || ||||| | || || | || | | | || | | || Sbjct 2279951 AGCTCAGTGGGCGATGAAATGGATCGA-CGGATCTCAAACCTTCGCTGAACGAATTGTAG 2279893 Query 64727 CTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAA 64786 |||| || ||||| ||||| || ||||| ||||| || || || || |||||||| | Sbjct 2279892 CTTTCGCTTGTGTTGAAGGCATCTTCTTCTCTGGAAGCTTTTGCTCCATCTTCTGGCTTA 2279833 Query 64787 AAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGG 64846 | || || || || ||||| || | | || || ||||| ||||||| || ||||| | Sbjct 2279832 AGAAACGAGGTCTCATGCCTGGGTTAACTTTCTCAAACGAATTGATCTCACGAGACGAAG 2279773 Query 64847 G 64847 | Sbjct 2279772 G 2279772 >seq184 Length=1182610 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/111 (79%), Gaps = 16/111 (14%) Strand=Plus/Minus Query 60704 AATGTAATAATAACTGACCTTAGCTCAATTGGTAGAGCGAAAGACTGTAGAGCACGTCTC 60763 |||||| ||||| | |||||||||||| ||||||||||| ||||||||| |||| Sbjct 428042 AATGTA-TAATATCCGACCTTAGCTCAGTTGGTAGAGCGGAAGACTGTA------GTCT- 427991 Query 60764 TGAGTAGGATGGTCAATCATCTTTAGGTCGCTGGTTCGATTCCGGCAGGTC 60814 ||| | || | ||||||||||||||||||||||||||||||||| Sbjct 427990 ---GTA--ACAGTAA---ATCTTTAGGTCGCTGGTTCGATTCCGGCAGGTC 427948 >seq234 Length=2418110 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/106 (79%), Gaps = 15/106 (14%) Strand=Plus/Plus Query 60712 AATAACTGACCTTAGCTCAATTGGTAGAGCGAAAGACTGTAGAGCACGTCTCTGAGTAGG 60771 || ||| |||||||||||| ||||||||||| |||||||||| ||| ||| || Sbjct 1064512 AACAACCGACCTTAGCTCAGTTGGTAGAGCGGAAGACTGTAG------TCTGTGAC-AG- 1064563 Query 60772 ATGGTCAATCATCTTTAGGTCGCTGGTTCGATTCCGGCAGGTCAGA 60817 ||| ||||||||||||||||||||||||||||||||| || Sbjct 1064564 -----CAA--ATCTTTAGGTCGCTGGTTCGATTCCGGCAGGTCGGA 1064602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570296541457280