Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq793 158 3e-33 seq236 152 1e-31 seq1328 147 5e-30 seq1125 147 5e-30 seq1396 140 7e-28 seq1177 138 3e-27 seq204 136 9e-27 seq1208 122 2e-22 seq1470 104 5e-17 seq971 98.7 2e-15 seq406 86.0 1e-11 >seq793 Length=772624 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| ||||| || || || |||||||||||||| || || | |||||| || ||| Sbjct 611146 AGGACAAGGTGAAGGGTCGATTCCTTTTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCT 611087 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| ||||| |||||||||| | |||||||||||| || Sbjct 611086 TCAAGCTGCTTACCGGCAAAGATGAGCCTTTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 611027 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| |||||| | || | | || || ||||| || || | |||||| || Sbjct 611026 TGGATCTTTGCTTTGACGTTGTCAATAGTATCAGAGCTCTCAACCTCCAAAGTAATGGTC 610967 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || |||||||| || |||| |||||| Sbjct 610966 TTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 610935 Score = 132 bits (146), Expect = 1e-25 Identities = 155/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || ||||| || |||||||||||||| || || | |||||||||| Sbjct 610913 CAAG-TGGAGGGTCGATTCTTTCTGAATGTTGTAATCGGCCAAGGTACGGCCATCTTCTA 610855 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||||||||| | || |||||||||| | || ||||| || || || | Sbjct 610854 GCTGTTTACCGGCGAAGATTAATCTTTGCTGGTCCGGAGGAATGCCTTCTTTATCCTGGA 610795 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | || | | |||| || ||||| || || ||||| || || |||| Sbjct 610794 TCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGC 610735 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || |||||||| | ||||| Sbjct 610734 CAGTGAGTGTTTTCACGAAAATTTGCAT 610707 >seq236 Length=1640546 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| |||||||| || || || || ||||||||||| ||||| | ||| | Sbjct 1089253 GAGACGGAGGACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCG 1089194 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || |||||||||||| || | | ||||||||||| | ||||||||| Sbjct 1089193 GCCGTCTTCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTC 1089134 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||| ||| | || | | ||||||| ||| || || || || Sbjct 1089133 CTTGTCTTGGATCTTCGCTTTCACATTGTCGATGGTGTCTGAGGACTCGACCTCTAGGGT 1089074 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || || |||||||||| |||||| || Sbjct 1089073 TATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 1089032 >seq1328 Length=1576597 Score = 147 bits (162), Expect = 5e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| ||||| || |||| ||| || ||||| | |||||||| | Sbjct 273087 CAAG-TGGAGGGTTGACTCCTTTTGAATATTGTTATCAGCCAAAGTACGGCCATCTTCAA 273029 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||| || ||||| ||||||||||||| | |||||||||||| ||||| | Sbjct 273028 GCTGTTTACCGGCAAAAATAAGTCTCTGCTGGTCCGGAGGGATTCCTTCCTTATCTTGGA 272969 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | || | |||| || || || || |||||||| || || |||| Sbjct 272968 TCTTTGCCTTAACATTGTCAATTGTGTCGGAGCTTTCAACCTCAAGAGTTATGGTCTTGC 272909 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| |||||||| || |||| ||||| Sbjct 272908 CCGTAAGAGTCTTTACAAAGATTTGCAT 272881 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||| ||| |||||||| ||||| || |||||||||||||| || | || | ||||| Sbjct 273320 AGGAGAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGCGTACGACCATCC 273261 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| |||||||| ||||||||||| | | ||||||||| || ||| Sbjct 273260 TCGAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGGATTCCTTCTTTATCT 273201 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | | ||||| || || || ||||| || ||||| Sbjct 273200 TGGATCTTGGCCTTGACGTTATCGATGGTATCTGAGCTTTCGACCTCAAGTGTTATAGTC 273141 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| || |||| |||||| Sbjct 273140 TTCCCTGTAAGAGTCTTAACAAAGATCTGCAT 273109 Score = 123 bits (136), Expect = 6e-23 Identities = 156/213 (73%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| || ||||| |||| |||||| || || | ||| | ||||| Sbjct 273549 AGTACCAAATGCAGAGTTGATTCTTTCTGGACGTTGTAGTCAGCAAGAGTGCGACCATCC 273490 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAA-GCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| || |||||||||| | ||||| ||||| ||||||||| ||||| Sbjct 273489 TCAAGATGTTTGCCAGCGAAGATAAAGTCTCTGTTGGTCTAGTTGGATTCCTTCTTTTTC 273430 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || |||||| | || | | ||| || ||||| ||||| |||||||| || Sbjct 273429 TTGAATCTTCGCCTTGACATTGTCAATGGTGTGAGAGCTCTCAACTTCTAGAGTAATGGT 273370 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || ||||| || | ||| || | ||||| Sbjct 273369 TTTTCCAGTGAGGGTTTCCACAAACATTTGCAT 273337 >seq1125 Length=2998257 Score = 147 bits (162), Expect = 5e-30 Identities = 164/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| ||||| || || || || ||||||||||| |||||||| |||| || ||| Sbjct 292764 AGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCT 292823 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| |||||||| || | | ||||||||||| | |||||||||||| | Sbjct 292824 TCGAGCTGCTTT--CCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGT 292881 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || |||||| | || | | |||| ||| ||| || || || || || | Sbjct 292882 CCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATTG 292941 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || ||||| || || |||||||||| |||||| || Sbjct 292942 TCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 292978 >seq1396 Length=1446835 Score = 140 bits (154), Expect = 7e-28 Identities = 159/210 (76%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || |||||||| |||||||||||||| || || || | ||||| || | Sbjct 400583 CAAG-TGAAGGGTTGACTCTTTCTGGATGTTGTAATCCGCCAAGGTACGACCATCCTCCA 400525 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| ||||| ||||| | |||||||||||||| | |||||||||||| || || Sbjct 400524 ACTGCTTT--CCGGCAAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTATCCTG 400467 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || || || | || | | ||||||| ||||| || || | || || || || Sbjct 400466 AATCTTGGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTCTT 400407 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||||||||| ||||| | |||||| Sbjct 400406 TCCAGTGAGAGTCTTGACGAAAATCTGCAT 400377 Score = 132 bits (146), Expect = 1e-25 Identities = 163/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| || ||||| | ||| || || || || || || || |||||||| || || || | Sbjct 399911 GAGCCTTAGGACCAAATGGAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAACGTACG 399852 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| ||||| ||||| || |||||||||||||||||||| |||| | || || Sbjct 399851 GCCATCCTCTAGCTGCTTT--CCAGCGAAGATAAGCCTCTGCTGATCCGGAGGAATGCCC 399794 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||| || || ||| || | || | |||| || || || || || || Sbjct 399793 TCCTTGTCTTGGATCTTGGCTTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGG 399734 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||| ||||||| |||||| Sbjct 399733 GTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 399693 Score = 129 bits (142), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| |||||||| || || |||||||| || || |||||||| || ||||| | Sbjct 400355 CAAG-TGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTGCCGTCTTCAA 400297 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || || ||||| | ||||||||||||| | || || ||||| || |||| Sbjct 400296 GTTGTTTTCCAGCAAAGATCAATCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGAA 400237 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||||| | || | | |||| || ||||| || || | ||| || || || | Sbjct 400236 TTTTAGCTTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTC 400177 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||| | ||||| Sbjct 400176 CAGTCAACGTCTTGACGAAAATTTGCAT 400149 Score = 123 bits (136), Expect = 6e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||| || || || ||||| | ||||| || | Sbjct 400811 CAAG-TGAAGGGTCGACTCCTTCTGGATGTTATAGTCAGCCAAAGTGCGACCATCCTCAA 400753 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || |||||||| || | ||||||||||| | || |||||||| || || | Sbjct 400752 GCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGA 400693 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | |||| || ||||| || || | || |||||||||| Sbjct 400692 TCTTAGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCCAAGGTGATAGTTTTGC 400633 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| |||||| Sbjct 400632 CAGTCAAAGTCTTGACGAAGATCTGCAT 400605 Score = 114 bits (126), Expect = 3e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| ||||| ||||||||||| || ||||| || ||||||||||| || || | ||||| Sbjct 400139 GAGCCTGAGAACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTTCT 400080 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || || || ||||| ||||||||||| | || ||||| |||| | ||| || Sbjct 400079 GCCGTCCTCGAGTTGCTTT--CCGGCGAAGATCAATCTTTGCTGATCCGGTGGGATACCC 400022 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || ||| || | || | |||| || || || || || || Sbjct 400021 TCCTTGTCCTGGATCTTAGCTTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGG 399962 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || || || || || ||||| | ||||| Sbjct 399961 GTGATAGTCTTCCCAGTTAGGGTTTTGACGAAAATTTGCAT 399921 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | ||||| || || || || ||||||||||| || || | || | Sbjct 401051 GAGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCCAGTGTGCG 400992 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || ||| || |||||||| || | ||||||||| | | ||| ||||| Sbjct 400991 ACCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCTTC 400932 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || | || | | |||| || ||||| || || || || Sbjct 400931 CTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGT 400872 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | |||||||||||| | |||||| Sbjct 400871 GATGGTCTTCCCGGTTAAAGTCTTCACGAAAATCTGCAT 400833 >seq1177 Length=2734319 Score = 138 bits (152), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || ||||| ||||||||||||||||| || || | |||||||||| Sbjct 987933 CAAG-TGGAGGGTTGATTCTTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCTA 987875 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||||||||| | || |||||||||| | || |||||||| || || | Sbjct 987874 GCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGA 987815 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | || | | |||| || ||||| || |||||||| || || || | Sbjct 987814 TCTTTGCCTTAACATTGTCGATGGTGTCGGAGCTCTCGACCTCAAGAGTGATGGTCTTAC 987755 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || |||||||| | ||||| Sbjct 987754 CAGTTAGTGTTTTCACGAAAATTTGCAT 987727 >seq204 Length=2333866 Score = 136 bits (150), Expect = 9e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||||||||| || ||||| ||||||||||||||||| | ||||| || ||| Sbjct 1139347 AGCACCAAATGAAGAGTTGATTCTTTCTGGATGTTGTAATCGGCGAGTGTTCTTCCGTCT 1139288 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| ||||||||||| | | ||||| |||| | |||||||||||| ||| Sbjct 1139287 TCCAATTGTTTTCCGGCGAAGATTAAACGTTGCTGATCCGGTGGGATTCCTTCCTTGTCT 1139228 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| ||| | || | |||| || || || || || || || || Sbjct 1139227 TGGATCTTGGCTTTCACATTGTCGATTGTGTCGGATGATTCAACCTCTAGGGTTATTGTC 1139168 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || |||||||||| ||||||||| Sbjct 1139167 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 1139133 >seq1208 Length=4595443 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || || |||||||||||||||||||| || || | || ||||| Sbjct 3925790 AGCACCAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCAGCAAGTGTGTGACCATCC 3925731 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| || || | ||||||||| |||||||||||| | |||||||||||| ||| Sbjct 3925730 TCTAGCTGCTTACCACCAAAGATAAGCTTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCT 3925671 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||| || | || | | || || || || || || | ||| || ||| Sbjct 3925670 TGAATCTTAGCTTTAACGTTGTCAATAGTATCAGAGCTTTCAACCTCCAAAGTGATGGTT 3925611 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGC 152102 ||||| || | |||||||| |||| |||| Sbjct 3925610 TTGCCTGTCAACGTCTTCACAAAGATCTGC 3925581 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || || |||||||||||||| || || || | | |||||| | Sbjct 3925557 CAAG-TGGAGCGTTGATTCCTTCTGGATGTTGTAATCTGCCAAGGTACGACAATCTTCCA 3925499 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||||||||| | || ||||||||| | || ||||||| || |||| Sbjct 3925498 GCTGTTTACCGGCGAAGATTAATCTTTGCTGGTCCTGAGGAATGTCTTCCTTGTCCTGAA 3925439 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | || | | || || ||||||| || |||||||| || |||| Sbjct 3925438 TCTTTGCCTTAACATTGTCGATAGTATCAGAGCTCTCTATCTCGAGAGTAATGGTCTTGC 3925379 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || |||||||| | ||||| Sbjct 3925378 CAGTGAGTGTTTTCACGAAAATTTGCAT 3925351 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || |||||||| ||||||||||||||||| || | || | |||||| Sbjct 3926018 AGCACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCGAGTGTGCGTCCATCT 3925959 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || |||| ||||| || ||||||||||| | | ||| || ||||| || Sbjct 3925958 TCGAGCTGCTTACCGGAAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 3925899 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 | ||| || |||||| | || | ||||||| | ||| || || | |||||| || Sbjct 3925898 TCAATCTTCGCCTTGACATTATCGATTGTGTCTGAGCCCTCAACCTCCAAAGTAATGGTC 3925839 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | |||||||| || | ||||| Sbjct 3925838 TTTCCAGTACGGGTCTTCACAAAAATTTGCAT 3925807 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/199 (72%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| |||| || |||||||||||||| || ||||| | ||||| || | Sbjct 3926237 CAAG-TGAAGAGTCGACTACTTCTGGATGTTGTAATCAGCCAAAGTCCAACCATCCTCAA 3926179 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | |||| | |||||||| || ||||| | ||| | ||| || ||||| || |||| Sbjct 3926178 GCTGTTTCACAGCGAAGATGAGTCTCTGTTAGTCTTGTGGGATCCCCTCCTTGTCCTGAA 3926119 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | ||||||| ||| | || || | ||| || || || Sbjct 3926118 TCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCCCGACCTCCAAAGTGATGGTCTT-- 3926061 Query 152077 CCGTGAGAGTCTTCACGAA 152095 ||||| |||||||| || Sbjct 3926060 -TGTGAG-GTCTTCACAAA 3926044 >seq1470 Length=2917085 Score = 104 bits (114), Expect = 5e-17 Identities = 149/208 (72%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || || |||||||| || | ||| || || || || | Sbjct 2171959 CAAG-TGAAGAGTCGACTCCTTCTG----TTGTAATCAGCAAGAGTCCTTCCGTCATCAA 2171905 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | | ||||| |||||||| ||||| ||| || | |||||||||||| || || | Sbjct 2171904 ---TAGTACCGGCAAAGATAAGTCTCTGATGGAACGGAGGGATTCCTTCCTTGTCCTGTA 2171848 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || || | || | | || || || || || || | |||||| ||||||| Sbjct 2171847 TCTTTGCCTTCACGTTATCAATAGTATCAGAGCTTTCAACCTCCAAAGTAATGGTTTTGC 2171788 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || |||||||| || |||| |||||| Sbjct 2171787 CTGTCAGAGTCTTGACAAAGATCTGCAT 2171760 >seq971 Length=4928269 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| || | |||||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct 3107459 CTGAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCCGCTAAGGTT 3107518 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC 151990 | |||||||| || || || || || || ||||| || || || Sbjct 3107519 CGGCCATCTTCGAGTTGCTTACCAGCAAATATCAGCCTTTGTTGATC 3107565 >seq406 Length=3140938 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || || | ||| | ||||||||| |||||||| ||||||||||| || |||| || Sbjct 2970417 CCTAAGCCTCAAGACCAAATGAAGAGTCGACTCTTTCTGGATGTTGTAGTCCGCTAGTGT 2970476 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 || |||||||| || ||| || || || || |||||||| || || | | ||||| Sbjct 2970477 TCGACCATCTTCAAGTTGTTTACCAGCAAATATCAGCCTCTGTTGATCAGGTGGTATTCC 2970536 Query 152003 TTCCTTTTCTTG 152014 || || || || Sbjct 2970537 CTCTTTGTCCTG 2970548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153792061208424