Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq178 122 1e-22 >seq178 Length=2153606 Score = 122 bits (134), Expect = 1e-22 Identities = 132/174 (76%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 169709 CGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCC 169768 |||||||||||||| |||||||| |||||| || || |||| ||||| || || | Sbjct 356582 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAACTCCTGTTGCAGCTGCGACT 356641 Query 169769 -GCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGG 169827 ||||||||| || |||| || ||||||| || || ||||| | ||||||||| || Sbjct 356642 TGCTGTTTTCTTGATCTATCCAATTGGGCAGGGAAGTTTTTCTGATGGTATGCCTCTAGG 356701 Query 169828 TATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCT 169881 ||||| || || || |||| ||| | || |||| |||||||||||||| || Sbjct 356702 AATCTCTGGTACTTTCAACTTTATGATTGTACTCCAGGCTGAGCACAACATTCT 356755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592184009578880