Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1396 196 1e-44 seq1177 196 1e-44 seq793 196 1e-44 seq1125 183 7e-41 seq236 183 7e-41 seq1328 174 4e-38 seq204 174 4e-38 seq1208 168 2e-36 seq1470 129 1e-24 seq146 102 2e-16 seq861 100 7e-16 seq971 95.1 3e-14 >seq1396 Length=1446835 Score = 196 bits (216), Expect = 1e-44 Identities = 173/216 (80%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || || || ||||||||||||||||||||||| ||| Sbjct 399924 CAAATTTTCGTCAAAACCCTAACTGGGAAGACTATCACCCTCGAGGTGGAAAGCTCTGAC 399983 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| ||||| |||||||| || || ||||| ||||| |||||| Sbjct 399984 ACAATCGACAACGTTAAAGCTAAGATCCAGGACAAGGAGGGTATCCCACCGGATCAGCAA 400043 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||||||||| || ||||| || || || || || || || || ||| || Sbjct 400044 AGATTGATCTTCGCCGGAAAGCAACTCGAGGACGGCAGAACCCTCGCTGACTACAACATC 400103 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || ||||| || ||||||||| | || ||| Sbjct 400104 CAGAAGGAGTCAACCCTTCATCTTGTTCTCAGGCTC 400139 Score = 181 bits (200), Expect = 3e-40 Identities = 164/205 (80%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || |||||| | |||||||| ||||||||| Sbjct 400380 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACCTTGGAGGTGGAGAGCTCAGAC 400439 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||||||||| || ||||||||||||||||||||||| Sbjct 400440 ACCATCGACAACGTGAAGGCCAAGATTCAGGATAAGGAAGGAATCCCTCCGGACCAGCAG 400499 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| |||||||| ||| | || ||||| | || | || ||||| ||| || Sbjct 400500 AGGTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTCGTACCTTGGCGGATTACAACATC 400559 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| ||||| || || |||| Sbjct 400560 CAGAAAGAGTCAACCCTTCA-CTTG 400583 Score = 168 bits (186), Expect = 2e-36 Identities = 161/205 (79%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||| | || || || || ||||| || |||||||| ||||| ||| Sbjct 400836 CAGATTTTCGTGAAGACTTTAACCGGGAAGACCATCACACTGGAGGTGGAGAGCTCCGAC 400895 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || ||||| |||||||| ||||| |||||||| |||||||| Sbjct 400896 ACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCAGCAG 400955 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| |||||||||||||| || || | || || || || || ||| || Sbjct 400956 CGTCTCATCTTCGCTGGAAAACAGCTCGAGGACGGTCGCACACTGGCTGACTACAACATC 401015 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 401016 CAGAAGGAATCGACCCTTCA-CTTG 401039 Score = 165 bits (182), Expect = 2e-35 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| ||||| || ||||||||||||||||||||||| ||| Sbjct 399696 CAGATCTTCGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCTCTGAC 399755 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| ||||| || ||||| || || || |||||||| ||||| Sbjct 399756 ACAATCGACAACGTTAAAGCCAAGATCCAAGACAAGGAGGGCATTCCTCCGGATCAGCAG 399815 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | ||||||||||| ||||| ||||| || ||||| | || | || ||||| || | Sbjct 399816 AGGCTTATCTTCGCTGGAAAGCAGCTAGAGGATGGCCGTACGTTGGCTGATTACAATATT 399875 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 399876 CAGAAGGAATCCACCCTCCAT 399896 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || ||||| |||||| | |||||||| ||||| ||| Sbjct 400608 CAGATCTTCGTCAAGACTTTGACTGGCAAAACTATCACCTTGGAGGTGGAGAGCTCTGAC 400667 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || ||||| |||||||| ||||| || |||||||||||||| Sbjct 400668 ACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAGCAG 400727 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || |||||||| || ||||| | ||| | || || |||||| || Sbjct 400728 CGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGCACTTTGGCTGACTATAACATC 400787 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 400788 CAGAAGGAGTCGACCCTTCA-CTTG 400811 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || ||||| || ||||| | |||||||| ||||| ||| Sbjct 400152 CAAATTTTCGTCAAGACGTTGACTGGAAAGACCATCACTTTGGAGGTGGAGAGCTCCGAC 400211 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || |||||| || ||||||||||| || || || || ||||||||||| Sbjct 400212 ACCATCGACAATGTCAAAGCTAAAATTCAGGACAAGGAGGGTATTCCACCGGACCAGCAG 400271 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || |||||||| || ||||| || || ||| | || || || ||| | Sbjct 400272 AGATTGATCTTTGCTGGAAAACAACTTGAAGACGGCAGAACTTTGGCTGACTACAACATT 400331 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || ||||| || |||| Sbjct 400332 CAGAAGGAGTCTACACTTCA-CTTG 400355 >seq1177 Length=2734319 Score = 196 bits (216), Expect = 1e-44 Identities = 169/208 (81%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||||||||| || || || || || ||||| || ||||| || ||||| ||| Sbjct 987730 CAAATTTTCGTGAAAACACTAACTGGTAAGACCATCACTCTTGAGGTCGAGAGCTCCGAC 987789 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||| |||||||| ||||| || ||||||||||||||| Sbjct 987790 ACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAGCAA 987849 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || | |||||||| ||| || Sbjct 987850 AGATTGATCTTCGCCGGTAAACAGCTAGAAGATGGCCGCACCTTGGCCGATTACAACATC 987909 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||||||||||| || || |||| || Sbjct 987910 CAGAAAGAATCAACCCTCCA-CTTGGTT 987936 >seq793 Length=772624 Score = 196 bits (216), Expect = 1e-44 Identities = 169/208 (81%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||||||||| ||||| || || || ||||| |||||||| || ||||| ||| Sbjct 610710 CAAATTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTCTGAC 610769 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||| ||||| |||||||| || ||||||||||||||| Sbjct 610770 ACCATCGACAATGTTAAGGCAAAGATCCAGGATAAAGAAGGCATTCCTCCGGACCAGCAA 610829 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||||| | || | |||||||| ||| | Sbjct 610830 AGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAACATT 610889 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || |||||||| || || || |||| || Sbjct 610890 CAGAAAGAATCGACCCTCCA-CTTGGTT 610916 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| || || || || || || | ||||| || ||||| || Sbjct 610938 CAGATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCTGAT 610997 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||||||| |||||| |||||||| |||||||||||||||||||||||| Sbjct 610998 ACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAGCAA 611057 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| ||||| || ||||| ||||| ||||| |||||||| || || ||| || Sbjct 611058 AGGCTCATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAACATC 611117 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || || ||||| Sbjct 611118 CAAAAGGAATCGACCCTTCACCTTGT 611143 >seq1125 Length=2998257 Score = 183 bits (202), Expect = 7e-41 Identities = 169/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 177916 AAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAA 177975 ||| | | || || ||||||||||| || || || || || |||||||||||||| || Sbjct 292980 AAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGT 292921 Query 177976 GCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035 || ||||||||||| || ||||| ||||| |||||||| ||||||||||| |||| Sbjct 292920 CTTCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCGG 292861 Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095 ||||||| ||| | || ||||||||||| ||||||||||| ||| | || | ||||| | Sbjct 292860 ACCAGCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAAGACGGACGAACCTTAGCCGACT 292801 Query 178096 ATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | ||| |||| || |||||||| || || ||||| Sbjct 292800 ACAACATCCAGAAGGAATCAACGCTTCACCTTGT 292767 >seq236 Length=1640546 Score = 183 bits (202), Expect = 7e-41 Identities = 169/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 177916 AAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAA 177975 ||| | | || || ||||||||||| || || || || || || ||||| ||||| || Sbjct 1089030 AAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAGT 1089089 Query 177976 GCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035 ||||||||||||||| || || ||| ||||| || ||||| ||||||||||| |||| Sbjct 1089090 CCTCAGACACCATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGG 1089149 Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095 ||||||| ||| | || |||||||| |||||||||||||| || | ||||| ||||| | Sbjct 1089150 ACCAGCAGCGATTGATTTTCGCCGGGAAACAGCTCGAAGACGGCCGCACTCTCGCCGACT 1089209 Query 178096 ATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | ||| |||| || |||||||| || ||||| || Sbjct 1089210 ACAACATCCAGAAGGAATCAACGCTTCATCTCGT 1089243 >seq1328 Length=1576597 Score = 174 bits (192), Expect = 4e-38 Identities = 161/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| ||||| || || || || || ||||| ||||||||||| Sbjct 273112 CAGATCTTTGTTAAGACTCTTACAGGGAAGACTATAACACTTGAGGTCGAAAGCTCAGAT 273171 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || || ||||||||||||||||| |||||||| Sbjct 273172 ACCATCGATAACGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCAGACCAGCAG 273231 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||| ||||| || || ||||| ||||| | || ||||| ||||| ||| || Sbjct 273232 AGACTTATCTTTGCCGGTAAGCAACTCGAGGATGGTCGTACGCTTGCGGATTACAACATC 273291 Query 178104 CAAAAAGAATCAACACTGCATCTT 178127 || || || ||||| || || ||| Sbjct 273292 CAGAAGGAGTCAACTCTTCACCTT 273315 Score = 163 bits (180), Expect = 7e-35 Identities = 158/202 (78%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||| |||| ||||| |||||||| || || || || || || ||||| || Sbjct 273340 CAAATGTTTGTGGAAACCCTCACTGGAAAAACCATTACTCTAGAAGTTGAGAGCTCTCAC 273399 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||| || ||||||||||||| | ||||| || Sbjct 273400 ACCATTGACAATGTCAAGGCGAAGATTCAAGAAAAAGAAGGAATCCAACTAGACCAACAG 273459 Query 178044 CGAC-TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 ||| |||||||||| || ||||| || || ||||| | |||||||| || || ||||| Sbjct 273460 AGACTTTATCTTCGCTGGCAAACATCTTGAGGATGGTCGCACTCTTGCTGACTACAACGT 273519 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 ||| ||||||||||| |||||| Sbjct 273520 CCAGAAAGAATCAACTCTGCAT 273541 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| || || || || || || || ||||| |||||||| ||| Sbjct 272884 CAAATCTTTGTAAAGACTCTTACGGGCAAGACCATAACTCTTGAGGTTGAAAGCTCCGAC 272943 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||| || || || ||||||||||||||||||||||| Sbjct 272944 ACAATTGACAATGTTAAGGCAAAGATCCAAGATAAGGAAGGAATCCCTCCGGACCAGCAG 273003 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| || ||||| |||||||| |||||||| | ||| | || ||| | || | Sbjct 273004 AGACTTATTTTTGCCGGTAAACAGCTTGAAGATGGCCGTACTTTGGCTGATAACAATATT 273063 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| || ||||| || || |||| || Sbjct 273064 CAAAAGGAGTCAACCCTCCA-CTTGGTT 273090 Score = 105 bits (116), Expect = 2e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || ||||||| || || | ||||| |||||||||||| Sbjct 273569 CAGATATTCGTCAAGACCCTTACCGGAAAAATCATAACTTTGGAGGTTGAAAGCTCAGAC 273628 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| || ||||| ||||| |||| || ||| | || Sbjct 273629 ACCATTGACAATGTAAAGGCCAAGATCCAAGACAAGGAAGGGATCCAACCAGACGAACAG 273688 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 |||||| |||||| || || || || || ||||| | |||| ||| || || Sbjct 273689 AGACTTAACTTCGCTGGCAAGCAACTTGAGGATGGTCGCACTCCTGCAGACTA 273741 Score = 89.7 bits (98), Expect = 1e-12 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052 || ||||| ||||||||| ||||||||||| || |||| | ||||||| |||| ||| Sbjct 272726 AATGTCAAGGCAAAGATTCAAGACAAAGAAGGGATTCCTCTAG-CCAGCAAAGACTCATC 272784 Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112 || |||| |||| ||| || ||| | | ||| | || ||||| || |||| ||||| Sbjct 272785 TTTTCCGGTAAACTGCTAGAGGATAGCTGTACTTTGGCTGATTACAATATCCAGAAAGAG 272844 Query 178113 TCAACACTGCATCTTG 178128 ||||| || || |||| Sbjct 272845 TCAACTCTCCA-CTTG 272859 >seq204 Length=2333866 Score = 174 bits (192), Expect = 4e-38 Identities = 165/210 (79%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || ||||||||||| || || || || || || ||||| ||||| ||| Sbjct 1139133 AAAATGC---AGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAA 1139189 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| ||||| || || ||| ||||| || ||||| ||||||||||| ||| Sbjct 1139190 TCATCCGACACAATCGACAATGTGAAAGCCAAGATCCAAGACAAGGAAGGAATCCCACCG 1139249 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||||| | ||||||||||||||||| | ||||| ||||| || || |||||| Sbjct 1139250 GATCAGCAACGTTTAATCTTCGCCGGAAAACAATTGGAAGACGGAAGAACACTCGCCGAT 1139309 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCAT 178124 || ||| |||| ||||||||||| || ||| Sbjct 1139310 TACAACATCCAGAAAGAATCAACTCTTCAT 1139339 >seq1208 Length=4595443 Score = 168 bits (186), Expect = 2e-36 Identities = 163/208 (78%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||||||||| ||||| || || || || || |||||| | || ||||| || Sbjct 3925354 CAAATTTTCGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGATAGAGAGCTCTGAT 3925413 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||||||||| |||| || |||| |||||||||| Sbjct 3925414 ACTATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGACATTCCTCAGGACCAGCAA 3925473 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| |||||||| |||||| | | || | || ||||| ||| || Sbjct 3925474 AGATTAATCTTCGCCGGTAAACAGCTGGAAGATTGTCGTACCTTGGCAGATTACAACATC 3925533 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || |||||||| || || |||| || Sbjct 3925534 CAGAAGGAATCAACGCTCCA-CTTGGTT 3925560 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | ||||| ||||| ||||| | ||||| |||||||| || Sbjct 3925582 CAGATCTTTGTGAAGACGTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGCTCTGAT 3925641 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| |||||||| ||||| ||||||||||||||||||||||| Sbjct 3925642 ACTATTGACAACGTTAAAGCTAAGATTCAAGACAAGGAAGGAATCCCTCCGGACCAGCAG 3925701 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||| | || || ||||| || ||||| || ||||| || || ||| || Sbjct 3925702 AAGCTTATCTTTGGTGGTAAGCAGCTAGAGGATGGTCACACACTTGCTGACTACAACATC 3925761 Query 178104 CAAAAAGAATCAACACTGCAT 178124 |||||||| || ||||| ||| Sbjct 3925762 CAAAAAGAGTCCACACTCCAT 3925782 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||| || | || ||||| || || || | ||||| || |||||||| Sbjct 3925810 CAAATTTTTGTGAAGACCCGTACTGGAAAGACCATTACTTTGGAGGTTGAGGGCTCAGAC 3925869 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||| ||||||| || || ||||| || |||||||| Sbjct 3925870 ACAATCGATAATGTCAAGGCGAAGATTGAGGACAAGGAGGGGATCCCACCAGACCAGCAG 3925929 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| |||| || ||||||||||||||| | || || || ||||| ||| || Sbjct 3925930 AGACTCATCTTTTCCGGTAAGCAGCTCGAAGATGGACGCACACTCGCTGATTACAACATC 3925989 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 3925990 CAAAAGGAGTCTACCCTCCAT 3926010 Score = 125 bits (138), Expect = 2e-23 Identities = 154/207 (74%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 177925 AAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACA 177984 ||||||| ||||| || |||||| || || ||||| | ||||| | |||||||||| Sbjct 3926039 AAATTTTTGTGAAGAC-CTCACA---AAGACCATCACTTTGGAGGTCGGGAGCTCAGACA 3926094 Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044 | ||||| || ||||| |||||||||||||| || || ||||| | ||| | || Sbjct 3926095 CAATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACAAGACTAACAGA 3926154 Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104 |||| |||||||| | |||||||| || ||||| ||||| | || ||||| ||| ||| Sbjct 3926155 GACTCATCTTCGCTGTGAAACAGCTTGAGGATGGTTGGACTTTGGCTGATTACAACATCC 3926214 Query 178105 AAAAAGAATCAACACTGCATCTTGTTT 178131 | || | || || || || |||| || Sbjct 3926215 AGAAGTAGTCGACTCTTCA-CTTGGTT 3926240 >seq1470 Length=2917085 Score = 129 bits (142), Expect = 1e-24 Identities = 135/177 (76%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| ||||| ||||| || || | ||||| |||||||| || Sbjct 2171763 CAGATCTTTGTCAAGACTCTGACAGGCAAAACCATTACTTTGGAGGTTGAAAGCTCTGAT 2171822 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || |||||| |||||||| ||||||||||||||| ||| || Sbjct 2171823 ACTATTGATAACGTGAAGGCAAAGATACAGGACAAGGAAGGAATCCCTCCGTTCCATCAG 2171882 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 |||||||||| ||||| | | || || |||||||||||||| ||||| ||| Sbjct 2171883 AGACTTATCTTTGCCGGTA---CTATTGATGACGGAAGGACTCTTGCTGATTACAAC 2171936 Score = 98.7 bits (108), Expect = 2e-15 Identities = 88/108 (81%), Gaps = 3/108 (3%) Strand=Plus/Plus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGAT--GGAAGGA 178083 || ||||||||||||||| || | ||||||||| | ||||||||||||||| ||| | Sbjct 2169342 ATTCCTCCGGACCAGCAAAGATTAATCTTCGCCAGTAAACAGCTCGAAGATGGGGACATA 2169401 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 | | |||||||| ||| |||| |||||||||||||| || |||| || Sbjct 2169402 CATTGGCCGATTACAACATCCAGAAAGAATCAACACTTCA-CTTGGTT 2169448 >seq146 Length=739853 Score = 102 bits (112), Expect = 2e-16 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||| | Sbjct 703299 AGGAATCCCTCCGGATCAGCAGCGATTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCG 703240 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||| | || ||||| ||| |||| |||| Sbjct 703239 TACTTTGGCTGATTACAACATCCAGAAAG 703211 >seq861 Length=1651656 Score = 100 bits (110), Expect = 7e-16 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 178004 AAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA-- 178061 ||||||||||||||| |||||||||| || ||| | || |||| |||||||| | | Sbjct 430718 AAAGATTCAGGACAAGGAAGGAATCCAACCAGACGAACAGAGACTCATCTTCGCTGAACT 430777 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || ||||| || ||||| | || ||||| || || ||| | ||||| ||| ||||||| Sbjct 430778 AAGCAGCTTGAGGATGGTCGCACACTTGCAGACTACAACATTCAAAAGGAAACAACACTT 430837 Query 178122 CATCTTGTTTTG 178133 || ||||| ||| Sbjct 430838 CACCTTGTGTTG 430849 >seq971 Length=4928269 Score = 95.1 bits (104), Expect = 3e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 ||||||||||| || || || || || || ||| | || || || || || || || ||| Sbjct 3107589 CAGGACAAAGAGGGTATACCACCCGATCAACAAAGGCTGATATTTGCTGGTAAGCAACTC 3107530 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||||||| | || | || ||||| ||| |||| ||||| || || || |||||||| Sbjct 3107529 GAAGATGGCCGAACCTTAGCGGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTC 3107470 Query 178131 TTGAGACTCAGA 178142 ||||| |||||| Sbjct 3107469 TTGAGGCTCAGA 3107458 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || || || ||||| || ||||| || ||| ||| Sbjct 2817428 CAGATTTTCGTGAAAACACTAACTGGCAAGACCATCACTCTTGAGGTCGAGAGCAGTGAC 2817369 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || ||||| ||||| |||||||||||||| Sbjct 2817368 ACCATCGACAATGTCAAGGCTAAGATCCAGGACAAAGAAGG 2817328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203701218065136