Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 5e-11 >seq6 Length=38054609 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 22798 ATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATT 22857 || |||||||||||||| || ||||||||| ||||| | || |||||||||||||| Sbjct 29820063 ATCTTCTGGCTGAAGAAGCGAGGGCTCATGCCTGGGTTAACCTTCTCCAACGAGTTGATC 29820122 Query 22858 AGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 || |||||||| || ||||| ||||| || || Sbjct 29820123 TCTCGAGACGAAGGCCTTCACTGCGACTTCGCGTG 29820157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356191286795638