Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq17 122 7e-23 seq5 113 3e-20 seq15 104 2e-17 seq13 100 2e-16 seq9 96.9 3e-15 seq18 91.5 1e-13 seq4 87.8 1e-12 seq7 86.0 5e-12 seq6 86.0 5e-12 seq3614 82.4 6e-11 >seq17 Length=44223734 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||||||||| | ||||||||||| | |||| |||||| || | ||||| || | | Sbjct 34300681 CCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGCC 34300622 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || ||||| | || || | || ||||||||||| ||||| ||||| || || | || Sbjct 34300621 AAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGA 34300562 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| |||| || || ||| |||||| | |||||| Sbjct 34300561 ATACCTTCCTTGTCTTGGATCTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCGACC 34300502 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || || ||||| || || || || ||||| || ||||| Sbjct 34300501 TCTAGAGTGATCGTCTTTCCCGTCAGTGTCTTGACAAAGATCTGCAT 34300455 >seq5 Length=38841276 Score = 113 bits (124), Expect = 3e-20 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||||||||| | |||||| | ||| | ||| |||||| || | ||||| |||| Sbjct 24922247 GCCTCCACGCAGACGTAACACGAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGC 24922188 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||||||||| | || ||||| || ||||||||||| ||||| ||||| || |||| ||| Sbjct 24922187 CAATGTACGACCATCCTCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGCGG 24922128 Query 43002 CACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCG 43059 | || || || || ||| ||| | ||||| | | | |||||| ||| ||| Sbjct 24922127 GATTCCCTCCTTGTC-CTGTATCTTAGCCTTGACGTTATCGATGGTGTCG-GAGCTCTCC 24922070 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | || || || ||||| |||| || || ||||| || ||||| Sbjct 24922069 ACCTCGAGTGTGATCGTCTTTCCCGTTAAGGTCTTGACAAAGATCTGCAT 24922020 >seq15 Length=50573455 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||||||||| | |||||||| || | ||| |||||| || | |||||| || | Sbjct 31711004 GCCTCCACGCAGACGCAACACCAAGTGAAGCGTGGACTCCTTCTGGATATTGTAGTCAGC 31711063 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| ||||| |||| || | || || || ||||| ||||||| ||| || || | || Sbjct 31711064 CAAGGTACGACCGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCCGGTGG 31711123 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||| || || || |||| | ||||| || ||| |||||| ||| ||| | Sbjct 31711124 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCG-GAGCTCTCAA 31711182 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| || || |||||||| || | || || ||||| || ||||| Sbjct 31711183 CCTCTAGAGTGATTGTTTTTCCTGTCAAGGTCTTGACAAAGATCTGCAT 31711231 >seq13 Length=83567108 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | || ||||| || | ||| |||||| || | |||||||| | Sbjct 39908410 GCCACCACGTAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGC 39908351 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | |||||| | || || | ||| || |||||||| ||||| | ||| || || | || Sbjct 39908350 AAGAGTACGTCCATCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 39908291 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||| ||||| || |||| ||||||| || ||| || ||| ||| ||| | Sbjct 39908290 GATACCCTCTTTGTCTTGGATCTTGGCTTTGACGTTGTCAATGGTATCGG-AGCTCTCCA 39908232 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || ||||| ||||| || | || ||||||||||||||||| Sbjct 39908231 CCTCCAAAGTGATAGTCTTTCCTGTCAAGGTCTTCACAAAAATTTGCAT 39908183 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | |||||||| | | ||| | |||| |||| || || ||||| || Sbjct 48378099 CTCCTTCTGGATGTTGTAATCCGCGAGTGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAA 48378158 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||| |||||| ||||| | || | ||||| || || |||| ||||||| | Sbjct 48378159 GATCAGTCGCTGCTGATCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATT 48378218 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | | ||||| | ||||| |||| ||||| || || || ||||| |||||||| Sbjct 48378219 GTCGATCGTGTCTGATGATTCGACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCAC 48378278 Query 43098 AAAAATTTGCATTTTCTTAATTTTATTTG 43126 ||| || ||||||||| | |||| |||| Sbjct 48378279 AAAGATCTGCATTTTCGT--TTTTTTTTG 48378305 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||||||||| || | || ||||| |||| ||| |||||| || | ||||| || | Sbjct 62907381 GCCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGC 62907322 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | || | | | || || | || ||||||||||| ||||| | ||| || || | || Sbjct 62907321 AAGAGTTCTTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGAGG 62907262 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||| ||||| || |||| ||||||| || ||| |||||| ||| ||| | Sbjct 62907261 AATACCCTCTTTGTCTTGGATCTTTGCTTTGACATTGTCAATGGTGTCG-GAGCTCTCCA 62907203 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || ||||| ||||| || | || || ||||| || ||||| Sbjct 62907202 CCTCCAAAGTAATAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 62907154 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||||||||| | |||||||||||| | ||| |||||| || | |||||||| | Sbjct 62907609 GCCTCCACGCAGACGTAACACCAAATGAAGAGTTGACTCCTTCTGAATGTTGTAATCTGC 62907550 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| || || | || || | |||||||| || ||||| | || || || || | || Sbjct 62907549 CAAGGTGCGACCATCCTCGAGCTGTTTGCCAGCGAAAATGAGACGTTGCTGGTCCGGTGG 62907490 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | || || || || ||| | || || || ||| |||||| ||| ||| | Sbjct 62907489 GATCCCCTCCTTATCTTGGATTTTGGCCTTCACGTTGTCAATAGTGTCG-GAGCTCTCCA 62907431 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| || || || || ||||| || || || ||||| || ||||| Sbjct 62907430 CCTCTAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACAAAGATCTGCAT 62907382 >seq9 Length=62778564 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | ||||||||| || | ||| |||||| || | ||||| || | Sbjct 30454972 GCCACCACGGAGACGTAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGC 30454913 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| ||||| | || || | || ||||||||||| ||||| | ||| || || | || Sbjct 30454912 CAAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGG 30454853 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||||| || ||| |||| || || ||| |||||| | ||| || Sbjct 30454852 AATGCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTGTCAATAGTGTCGGAACTCTCCAC 30454793 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || || || ||||| || || || ||||| || ||||| Sbjct 30454792 TTCTAGAGTAATGGTCTTCCCGGTAAGGGTCTTGACAAAGATCTGCAT 30454745 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||||| |||| | || || |||| |||| || || ||||| || Sbjct 52511126 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAA 52511067 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 ||||| |||||| || |||| || | ||||| || || |||| | ||||| | Sbjct 52511066 AATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 52511007 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | | |||||| | |||||| || | || || |||||||| || || |||||||| Sbjct 52511006 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTTCCCGTAAGGGTTTTCAC 52510947 Query 43098 AAAAATTTGCATTTT 43112 ||| || ||||| || Sbjct 52510946 AAAGATCTGCATCTT 52510932 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||||||||| | |||||||| || | || ||||||||| | ||||| || | | Sbjct 30497383 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGCC 30497324 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||||| | |||| || | ||| || |||||||| ||||| | ||| || || | || Sbjct 30497323 AATGTTCTGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGA 30497264 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | ||||| || || |||| | || || || ||| ||||||| ||| ||| || Sbjct 30497263 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCAATTGTGTCG-GAGCTCTCCAC 30497205 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || || || || || | || || ||||| || ||||| Sbjct 30497204 CTCTAGAGTAATGGTCTTCCCTGTCAATGTCTTGACAAAGATCTGCAT 30497157 >seq18 Length=77673080 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||||||||| | ||||||||||| | |||| ||||||||| | ||||| || | Sbjct 47092683 GCCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC 47092624 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || |||| || | || ||||| || || || | || || ||||| | || Sbjct 47092623 TAAGGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGG 47092564 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | || || | ||| |||||| ||| ||| | Sbjct 47092563 GATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCG-GAGCTCTCCA 47092505 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| ||||||||| || || || || || || || || || ||||| Sbjct 47092504 CCTCTAGCGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47092456 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||||||||| | ||||||||||| | |||| ||||||||| | ||||| || | Sbjct 47106802 GCCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC 47106861 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || |||| || | || ||||| || || || | || || ||||| | || Sbjct 47106862 TAAGGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGG 47106921 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | || || | ||| |||||| ||| ||| | Sbjct 47106922 GATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCG-GAGCTCTCCA 47106980 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| ||||||||| || || || || || || || || || ||||| Sbjct 47106981 CCTCTAGCGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47107029 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||||||||| | ||||||||||| | |||| ||||||||| | ||||| || | Sbjct 47110262 GCCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC 47110321 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || |||| || | || ||||| || || || | || || ||||| | || Sbjct 47110322 TAAGGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGG 47110381 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | || || | ||| |||||| ||| ||| | Sbjct 47110382 GATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCG-GAGCTCTCCA 47110440 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| ||||||||| || || || || || || || || || ||||| Sbjct 47110441 CCTCTAGCGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47110489 >seq4 Length=33175494 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | |||||||| | | ||| | | |||| |||| || || ||||| || Sbjct 4746222 CTCCTTCTGGATGTTGTAATCCGCGAGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAA 4746281 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||| ||||| ||||| | || | ||||| || || |||| | || || | Sbjct 4746282 GATCAGACGCTGCTGATCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 4746341 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | | |||||| | ||||| |||| ||||| || || || ||||| |||||||| Sbjct 4746342 GTCGATCGTGTCGGATGATTCGACCTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCAC 4746401 Query 43098 AAAAATTTGCATTTTCTT 43115 ||| || | ||||||||| Sbjct 4746402 AAAGATCTACATTTTCTT 4746419 >seq7 Length=28547970 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| | ||| | | |||||| || | || |||||| || | ||||| || | Sbjct 12159604 CCTCCTCTCAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 12159663 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | |||| |||| || || ||||| || |||| ||||| || || | ||| Sbjct 12159664 AGCGTCCTCCCGTCCTCCAGCTGCTTCCCGGCGAATATCAGACGCTGCTGGTCCGGCGGG 12159723 Query 43003 ACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||| || || |||| || | ||||| || | | |||||| | ||||| Sbjct 12159724 ATACCTTCCTTGTC-CTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 12159782 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 |||| ||||| || || || ||||| ||||||||||| || |||||||| Sbjct 12159783 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 12159833 >seq6 Length=38054609 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||||||||| || | || |||| |||| || |||||| || | ||||||||| | Sbjct 21964931 GCCTCCACGTAGACGCAAGACCAGGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGC 21964872 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| || | |||| ||||| || || ||||| || || | | ||| ||||| | || Sbjct 21964871 CAAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGG 21964812 Query 43002 CACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCT-CG 43059 | ||||| || || |||| || |||| || || | | ||||| ||| | | Sbjct 21964811 AATGCCTTCCTTGTC-CTGAATCTTGGCTTTAACGTTGTCGATGGTGTCAG-AGCTTTCC 21964754 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | || || || |||||||| |||||||||||||| || ||||| Sbjct 21964753 ACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 21964704 >seq3614 Length=4742 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||||||||| | ||||||||||| | |||| ||||||||| | ||||| || | Sbjct 399 GCCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC 458 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || ||| || | || ||||| || || || | | || ||||| | || Sbjct 459 TAAGGTGCGACAGTCTTCAAGCTGCTTGCCAGCGAAGATGAGAAGTTGCTGATCCGGAGG 518 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | ||||| || || |||| | || || | ||| |||||| ||| ||| | Sbjct 519 GATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCG-GAGCTCTCCA 577 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| ||||||||| || || || || || || || || || ||||| Sbjct 578 CCTCTAGCGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381324301157268