Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq14 109 5e-19 seq7 109 5e-19 seq5 109 5e-19 seq17 104 2e-17 seq9 100 2e-16 seq18 98.7 8e-16 seq13 93.3 4e-14 seq6 93.3 4e-14 seq3 93.3 4e-14 seq1 93.3 4e-14 seq4 91.5 1e-13 seq3614 89.7 4e-13 seq12 86.0 5e-12 >seq14 Length=28343526 Score = 109 bits (120), Expect = 5e-19 Identities = 140/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 48537 CCTTT-TGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || |||||||| |||||||| || | || || ||||| |||||| || | Sbjct 22849620 CCTTTCTGGATGTTGTAGTCAGCCAAGGTACGACCATCTTCGAGCTGTTTACCGGCGAAG 22849679 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || ||||||||||||||| || | | ||||||||| || || |||| | Sbjct 22849680 ATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTG 22849739 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| |||| |||||| ||||| ||| ||||| || ||||| || |||||||| Sbjct 22849740 TCGATGGTGTCGGAGGACTCCACCTCGAGTGTGATGGTCTTGCCGGTTAGGGTTTTCACG 22849799 Query 48716 AAAATCTGCATC 48727 || ||||||||| Sbjct 22849800 AAGATCTGCATC 22849811 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || || | || ||||||| |||||||||||| || | Sbjct 25721915 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTACCGGCGAA 25721974 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 || | ||||||||| ||| || | | ||||||||| || || ||||| | Sbjct 25721975 GATCAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 25722034 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || ||||| |||| || || ||||| ||||| || ||||| ||||| |||||| Sbjct 25722035 GTCG--ATGGTGTCGGAGGATTCGACCTCGAGGGTTATTGTCTTACCCGTGAGGGTTTTC 25722092 Query 48713 ACAAAAATCTGCATC 48727 || || ||||||||| Sbjct 25722093 ACGAAGATCTGCATC 25722107 >seq7 Length=28547970 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || ||||| || |||||| || |||||||| || || | | | ||||||| Sbjct 12159621 CACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTCCTCCCGTCCTC 12159680 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||| ||| || | || | ||||||||| ||| ||| | || |||||||||| Sbjct 12159681 CAGCTGCTTCCCGGCGAATATCAGACGCTGCTGGTCCGGCGGGATACCTTCCTTGTCCTG 12159740 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || ||||| | | || || |||| || || ||| | ||||| || || Sbjct 12159741 AATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGACCTCTAGGGTTATCGTCTT 12159800 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || || ||||||||||| |||||||| Sbjct 12159801 CCCCGTTAGGGTTTTCACAAAGATCTGCAT 12159830 >seq5 Length=38841276 Score = 109 bits (120), Expect = 5e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || || ||||| || |||||| || |||||||| ||||| Sbjct 24217363 ACCACCACGAAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCAGC 24217304 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | |||| |||| |||||| ||| || | || | | |||||||||| || Sbjct 24217303 CAAGGTTCTCCCGTCTTCCAACTGCTTGCCGGCGAAGATAAGCCTCTGCTGATCCGGAGG 24217244 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | | ||||| ||| ||| || ||| | | | || ||||| |||| |||| Sbjct 24217243 GATTCCCTCCTTATCCTGAATCTTGGCCTTAACGTTGTCG--ATGGTGTCGGAGCTCTCC 24217186 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || ||||| || ||||||||||||||||| || ||||||||| Sbjct 24217185 ACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATC 24217135 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | |||||| | |||||| || |||||| ||||||||||| || ||| Sbjct 24922246 CCTCCACGCAGACGTAACACGAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGCC 24922187 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 ||| || | ||||||| |||||| ||| | | || ||||||||||| || ||| Sbjct 24922186 AATGTACGACCATCCTCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGCGGG 24922127 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||||||||| || || ||||| | ||||| |||| |||| | Sbjct 24922126 ATTCCCTCCTTGTCCTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACC 24922067 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| ||| || || || || || | || || ||||| |||||||| Sbjct 24922066 TCGAGTGTGATCGTCTTTCCCGTTAAGGTCTTGACAAAGATCTGCAT 24922020 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48497 AAACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCA 48556 |||||||| || | | | || || ||||| ||| |||||| || |||||||| || Sbjct 24218049 AAACCTCCACGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCT 24217990 Query 48557 GCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACC 48616 ||||| || | ||||| |||||||| || || | || | ||||||||| ||| Sbjct 24217989 GCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 24217930 Query 48617 GGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCC 48676 || | | ||||||||| || || ||| | | ||||| |||| |||| Sbjct 24217929 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCC 24217870 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | ||| ||||| || ||||| | || || || ||||||||||| Sbjct 24217869 ACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTAACGAAAATCTGCAT 24217820 >seq17 Length=44223734 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| |||| | ||||| |||||||| ||| |||||| ||||||||||| ||||| Sbjct 34300682 ACCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGC 34300623 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||| |||||||| ||| | | || ||||||||||| ||| || Sbjct 34300622 CAAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGG 34300563 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677 | || ||||||||| || || |||| | | | ||||| |||| | ||| Sbjct 34300562 AATACCTTCCTTGTCTTGGATCTT-GGCTTTCACGTTGTCAATGGTGTCGGAACTCTCGA 34300504 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || || || || || || || || || ||||| |||||||| Sbjct 34300503 CCTCTAGAGTGATCGTCTTTCCCGTCAGTGTCTTGACAAAGATCTGCAT 34300455 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || || | ||| | || | |||||| || |||||| || |||||||||||||| Sbjct 38927866 CCACCACGGAGCCTGAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCT 38927807 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || ||||||| |||||||| ||| || | || | | ||||||||| || Sbjct 38927806 AGAGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGA 38927747 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCG 48677 | || |||||||||| ||| || |||| | | || ||||| || | |||| Sbjct 38927746 ATACCTTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCG--ATGGTGTCAGAGCTCTCCA 38927689 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || || ||||| |||||||| ||||| || || ||||||||| Sbjct 38927688 CCTCAAGGGTGATCGTTTTGCCGGTGAGTGTTTTAACGAAGATCTGCATC 38927639 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | ||||| || || || || |||||| || |||||||| ||||| Sbjct 34300453 CCTCCACGCAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCG 34300394 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || |||| || |||||||| ||| || | || || | |||||||||| || Sbjct 34300393 AGAGTTCTACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGGGA 34300334 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCG 48677 | | |||||| ||| || || |||| | | || ||||| |||| ||| Sbjct 34300333 ATGCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCG--ATGGTGTCGGAGCTTTCCA 34300276 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || || || || ||||||||||| || || || ||||||||| Sbjct 34300275 CCTCGAGGGTGATCGTCTTCCCGGTGAGAGTCTTTACGAAGATCTGCATC 34300226 Score = 84.2 bits (92), Expect = 2e-11 Identities = 166/242 (69%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 48487 AAGACAGTCAAAA-CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAA 48545 |||| | | |||| || ||||| | | ||||| || ||||| || ||||||||||| Sbjct 34300923 AAGAGACTTAAAAGCCACCGCGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTTTGAA 34300864 Query 48546 TGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGC 48604 ||||||| || | ||| || || | ||||| |||||||| || || | || | |||| Sbjct 34300863 TGTTGTAGTC-GGCAAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGC 34300805 Query 48605 TGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTA 48664 ||||| || || | | ||||||||| || || ||||| | ||||| Sbjct 34300804 TGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTG 34300745 Query 48665 TCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGC 48724 || | |||| ||| | ||| ||||| || ||||| | || || ||||| |||||| Sbjct 34300744 TCCGAGCTCTCCACCTCCAGTGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGC 34300685 Query 48725 AT 48726 || Sbjct 34300684 AT 34300683 >seq9 Length=62778564 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| || |||||| || |||||||| || || | || |||| |||||||| Sbjct 52511138 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCTTCCAGCTG 52511079 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || |||| | |||||||| || || | | |||||||||| || || Sbjct 52511078 CTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTT 52511019 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | | ||||| |||| ||||| ||||| || || ||||| || || Sbjct 52511018 GGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTTCCCGT 52510959 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 || ||||||||||| ||||||||| Sbjct 52510958 AAGGGTTTTCACAAAGATCTGCATC 52510934 Score = 96.9 bits (106), Expect = 3e-15 Identities = 170/244 (70%), Gaps = 3/244 (1%) Strand=Plus/Minus Query 48484 ACAAAGACAGTCAAAACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTG 48543 |||||||| | ||| || || || | | ||||| || ||||| || |||||| || Sbjct 30455214 ACAAAGACT-TAAAAGCCACCACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTG 30455156 Query 48544 AATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAAC 48602 ||||||||| || | ||| || || | ||||| |||||||| || || | || | || Sbjct 30455155 AATGTTGTAGTC-GGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGAC 30455097 Query 48603 GCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGG 48662 ||||||| || || | | ||||||||| ||||| ||||| | |||| Sbjct 30455096 GCTGCTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATTTTGGCCTTGACGTTATCAATGG 30455037 Query 48663 TATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCT 48722 | || | |||| ||| | ||| ||||| || ||||| ||||| |||||||| |||| Sbjct 30455036 TGTCCGAGCTCTCCACCTCAAGTGTGATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCT 30454977 Query 48723 GCAT 48726 |||| Sbjct 30454976 GCAT 30454973 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | || || || || || || |||||| || || ||||||||||| Sbjct 30454744 ACCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGC 30454685 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || ||||||| ||||||||||| | | || ||||||||||| || || Sbjct 30454684 GAGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 30454625 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677 | | |||||||| || || |||| | | | | ||||| |||| |||| Sbjct 30454624 AATCCCCTCCTTGTCTTGGATCTT-AGCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCA 30454566 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || || |||||||||||||| || || |||||||| Sbjct 30454565 CCTCGAGCGTGATCGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCAT 30454517 >seq18 Length=77673080 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | ||||| |||||||| ||| |||||||||||||||||| ||||| Sbjct 47092682 CCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCT 47092623 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || |||| || |||||||| || || | || | ||| ||||||||| || Sbjct 47092622 AAGGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGGG 47092563 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||||| || || ||| | | || || |||| |||| | Sbjct 47092562 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCGGAGCTCTCCACC 47092503 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | ||||| || || || ||||| || || || || |||||||| Sbjct 47092502 TCTAGCGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47092456 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | ||||| |||||||| ||| |||||||||||||||||| ||||| Sbjct 47106803 CCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCT 47106862 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || |||| || |||||||| || || | || | ||| ||||||||| || Sbjct 47106863 AAGGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGGG 47106922 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||||| || || ||| | | || || |||| |||| | Sbjct 47106923 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCGGAGCTCTCCACC 47106982 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | ||||| || || || ||||| || || || || |||||||| Sbjct 47106983 TCTAGCGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47107029 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | ||||| |||||||| ||| |||||||||||||||||| ||||| Sbjct 47110263 CCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCT 47110322 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || |||| || |||||||| || || | || | ||| ||||||||| || Sbjct 47110323 AAGGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGGG 47110382 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||||| || || ||| | | || || |||| |||| | Sbjct 47110383 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCGGAGCTCTCCACC 47110442 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | ||||| || || || ||||| || || || || |||||||| Sbjct 47110443 TCTAGCGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47110489 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575 ||| | ||| || ||| ||||||||||||||||||||| || | | || || |||| | Sbjct 62463325 CACAAGATGGAGCGTGGACTCCTTTTGAATGTTGTAATCCGCAAGAGTG-CGTCCGTCTT 62463267 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | |||||||| || || | || | | |||||| || || | | |||||||||| Sbjct 62463266 CGAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCT 62463207 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||| || ||||| | | ||||| || | ||| ||| | || ||||||| Sbjct 62463206 GAATCTTTGCCTTGACATTATCGATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTTT 62463147 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | |||||||| || || |||||||||||||| Sbjct 62463146 TGCCGGTGAGGGTCTTGACAAAAATCTGCAT 62463116 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | |||||| | || | ||| || || |||||| || ||||||||||| || Sbjct 62462659 ACCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGC 62462600 Query 48559 CAATTGTCGCT--CGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACC 48616 ||| ||| || ||||||| |||||||||||| | | || | | |||||| ||| Sbjct 62462599 CAAA-GTC-CTGCCGTCCTCGAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGT 62462542 Query 48617 GGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCC 48676 || | | || || ||| || || ||||| | ||||| |||| ||| Sbjct 62462541 GGGATTCCCTCTTTATCCTGGATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCG 62462482 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || ||||| || ||||||||||||||||| ||||| |||||| Sbjct 62462481 ACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCATC 62462431 >seq13 Length=83567108 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || | |||||| || |||||| || |||||||||||||| Sbjct 62906925 ACCACCACGGAGCCTGAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGC 62906866 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || |||| ||||||||||| ||| || | || | | |||||||||| || Sbjct 62906865 GAGGGTTCTGCCGTCTTCCAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGG 62906806 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677 | | ||||||||| || || |||| | | | | ||||| |||| ||| Sbjct 62906805 AATGCCCTCCTTGTCCTGGATCTT-GGCTTTAACGTTGTCGATGGTGTCGGAGCTTTCCA 62906747 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || ||||| || ||||||||||| || || || ||||||||| Sbjct 62906746 CCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 62906697 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | |||||| |||||||| || |||||| |||||||||||||| ||| Sbjct 62907608 CCTCCACGCAGACGTAACACCAAATGAAGAGTTGACTCCTTCTGAATGTTGTAATCTGCC 62907549 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || | ||||| ||||| || || || |||| | ||| ||||| ||| || Sbjct 62907548 AAGGTGCGACCATCCTCGAGCTGTTTGCCAGCGAAAATGAGACGTTGCTGGTCCGGTGGG 62907489 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||||| || ||||| ||| | | || || |||| |||| | Sbjct 62907488 ATCCCCTCCTTATCTTGGATTTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACC 62907429 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || ||||| || ||||| || || || ||||| |||||||| Sbjct 62907428 TCTAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACAAAGATCTGCAT 62907382 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| || |||||| || ||||||||||| || | | | | |||| ||||||||| Sbjct 48378088 TGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGTGTCCTCCCGTCTTCCAGCTGC 48378147 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | |||||||||||| || | | |||||||||| || || Sbjct 48378148 TTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGGGATGCCTTCCTTGTCCTGGATCTTG 48378207 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 |||| | | || || || | || || ||| | ||||| || || || || Sbjct 48378208 GCTTTGACATTGTCGATCGTGTCTGATGATTCGACCTCTAGGGTTATCGTCTTCCCCGTT 48378267 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || ||||||||||| |||||||| Sbjct 48378268 AGGGTTTTCACAAAGATCTGCAT 48378290 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 || || || ||||| || ||| || ||||||||||||||||||| | || ||||| Sbjct 62924326 AAGACCAAGTGAAGCGTAGACTCTTTCTGAATGTTGTAATCAGCCAGTGTTCTGCCGTCC 62924267 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 || |||||||| ||| | | || | | |||||| || || | | ||||||||| Sbjct 62924266 TCTAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCT 62924207 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 || || ||||| | |||| || || | | |||| ||| | || ||||| Sbjct 62924206 TGGATCTTTGCCTTGACATTGTCTATAGTGTCTGAACTCTCCACCTCCAGAGTGATGGTC 62924147 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || || || || ||||||||||| Sbjct 62924146 TTCCCGGTCAGTGTCTTAACGAAAATCTGCAT 62924115 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGT 48572 ||| || || |||||||| ||||||||||||||||| |||| ||| || ||| | | Sbjct 62924099 TAAGACCAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAG-CAAGAGTACGCCCAT 62924041 Query 48573 CCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGT 48632 | || || ||||| || | | || || | |||||| || || | || ||||| | Sbjct 62924040 CTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGAATACCCTCCTTAT 62923981 Query 48633 CCATAATTTTCTGCTT---GATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTA 48689 || ||| ||| |||| || | || |||||||| | | |||| ||| | || | Sbjct 62923980 CCTGAATCTTC-GCTTTAACATTGTCG--ATGGTATCTGAACTCTCCACCTCCAAAGTAA 62923924 Query 48690 TGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||||| || || | ||| || ||||| |||||||| Sbjct 62923923 TGGTTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 62923887 >seq6 Length=38054609 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT--CGTCCTCCAGCTGCTTACCGCCG 48592 |||||| || || |||||||||||||| ||| || |||| |||| |||||| ||| || Sbjct 21964895 CTCCTTCTGGATATTGTAATCAGCCAAG-GTC-CTGCCGTCTTCCAACTGCTTTCCGGCG 21964838 Query 48593 TAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATA 48652 | || | | ||||||||| || | | |||||||||| ||| || |||| | Sbjct 21964837 AAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTG-GCTTTAAC 21964779 Query 48653 GACG-CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTT 48711 | | | ||||| || | ||| ||| | || ||||| || |||||||||||||| Sbjct 21964778 GTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTTTT 21964719 Query 48712 CACAAAAATCTGCATC 48727 |||||| ||||||||| Sbjct 21964718 CACAAAGATCTGCATC 21964703 >seq3 Length=43957692 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || || | || |||||||||||||| Sbjct 13791307 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCCAGCTGC 13791248 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | |||||||| ||| || | | |||||||||| || || Sbjct 13791247 TTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 13791188 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| |||| ||||| |||| || || || || || ||| Sbjct 13791187 GCCTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATTGTCTTCCCCGTG 13791128 Query 48704 AGAGTTTTCACAAAAATCTGCATC 48727 || |||||||| || ||||||||| Sbjct 13791127 AGGGTTTTCACGAAGATCTGCATC 13791104 >seq1 Length=45320942 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || || |||||||| |||||| || |||||||| || || || || | ||||| Sbjct 18860897 ACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCG 18860956 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| || || | || | ||||||||| ||| || | || ||||||||| Sbjct 18860957 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCTTGG 18861016 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || || ||||| | ||||| |||| |||| ||| | ||| ||||| || Sbjct 18861017 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTTG 18861076 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| | || ||||||||||||||||| Sbjct 18861077 CCGGTCAAGGTCTTCACAAAAATCTGCAT 18861105 >seq4 Length=33175494 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT-CGTCCTCCAGCTG 48582 ||||| || |||||| || ||||||||||| | | | |||| | |||| |||||||| Sbjct 4746211 TGAAGAGTCGACTCCTTCTGGATGTTGTAATCCG-CGAGTGTCCTTCCGTCTTCCAGCTG 4746269 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || | ||||||||||||| || | | |||||||||| || || Sbjct 4746270 CTTCCCGGCGAAGATCAGACGCTGCTGATCCGGTGGGATGCCTTCCTTGTCCTGGATCTT 4746329 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || || |||| || || ||| | ||||| || || || || Sbjct 4746330 GGCCTTCACATTGTCGATCGTGTCGGATGATTCGACCTCTAAGGTTATCGTCTTCCCCGT 4746389 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 || ||||||||||| |||| ||| Sbjct 4746390 TAGGGTTTTCACAAAGATCTACAT 4746413 >seq3614 Length=4742 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | ||||| |||||||| ||| |||||||||||||||||| ||||| Sbjct 400 CCTCCACGCAGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCT 459 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || || ||| || |||||||| || || | || | | | ||||||||| || Sbjct 460 AAGGTGCGACAGTCTTCAAGCTGCTTGCCAGCGAAGATGAGAAGTTGCTGATCCGGAGGG 519 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||||| || || ||| | | || || |||| |||| | Sbjct 520 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCGGAGCTCTCCACC 579 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | ||||| || || || ||||| || || || || |||||||| Sbjct 580 TCTAGCGTTATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 626 >seq12 Length=60369500 Score = 86.0 bits (94), Expect = 5e-12 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || || ||||| || |||||| || || ||||| ||||| Sbjct 48264543 ACCACCACGAAGCCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGC 48264484 Query 48559 CAATTGTCGCT--CGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACC 48616 ||| ||| || | || |||| ||||| ||| || | || | | |||||||||| Sbjct 48264483 CAAG-GTC-CTGCCATCTTCCAATTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGT 48264426 Query 48617 GGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTC 48675 || | || |||||| ||| || || |||| | | | | ||||| || | || Sbjct 48264425 GGGATACCTTCCTTATCCTGGATCTTG-GCTTTAACGTTGTCGATGGTGTCAGAGCTTTC 48264367 Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 | ||||| || ||||| || ||||||||||||||||| || ||||||||| Sbjct 48264366 CACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATC 48264315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421201164045746