Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq9 122 7e-23 seq17 105 6e-18 seq15 105 6e-18 seq13 102 7e-17 seq4 102 7e-17 seq7 98.7 9e-16 seq3 96.9 3e-15 seq14 91.5 1e-13 seq5 89.7 4e-13 seq12 87.8 2e-12 seq4606 86.0 5e-12 seq6 86.0 5e-12 seq18 84.2 2e-11 >seq9 Length=62778564 Score = 122 bits (134), Expect = 7e-23 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||| ||||| | || |||||| | || ||| |||| |||||| || Sbjct 52510932 AAGATGCAGATCTTTGTGAAAACCCTTACGGGAAAAACAATCACCCTCGAGGTCGAGTCC 52510991 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | ||||| ||||| ||||| |||||||| |||||||| Sbjct 52510992 TCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGAC 52511051 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| ||||||||| || ||| ||||| || ||||| | | | | || ||| || Sbjct 52511052 CAGCAGCGACTGATTTTCGCCGGGAAGCAGCTGGAAGACGGCCGCACGCTCGCCGACTAC 52511111 Query 24168 AACATTCAAAAAGAATCTACAATTCAT 24194 ||||| || || || || || ||||| Sbjct 52511112 AACATCCAGAAGGAGTCGACGCTTCAT 52511138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/143 (74%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 24005 AAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCA 24064 |||| | ||| | |||| | | || ||| |||| |||||| || |||||||||||| | Sbjct 43527501 AAAACCCTTACCGGGAAGACC-ATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAA 43527443 Query 24065 AGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTA 24124 ||||| ||||| ||||||||||| || ||||| ||||| ||| || |||| | Sbjct 43527442 TGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAGCAGCGATTGATCTT 43527383 Query 24125 CGGCGGCAAGCAACTCGAAGATG 24147 || || || || |||||||||| Sbjct 43527382 CGCTGGAAAACAGCTCGAAGATG 43527360 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || |||||||| ||||| | ||||| | || || ||| Sbjct 30496929 ATGCAAATCTTCGTTAAGACATTAACCGGAAAGACTATTACTTTGGAGGTGGAGAGTTCA 30496988 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | |||||| ||||| ||||| || || || |||||||| || Sbjct 30496989 GATACTATTGACAACGTCAAAGCTAAGATCCAAGACAAGGAGGGTATTCCTCCCGACCAG 30497048 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | ||| ||||| ||||| |||| |||| || || |||||| Sbjct 30497049 CAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGGAGAACTCTCGCTGACTATAAC 30497108 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || || ||||| Sbjct 30497109 ATTCAGAAGGAGTCTAC 30497125 >seq17 Length=44223734 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || |||||| | || || ||| |||| ||| | || || ||| | Sbjct 38927640 ATGCAGATCTTCGTTAAAACACTCACCGGCAAAACGATCACCCTTGAGGTGGAGAGCTCT 38927699 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| |||||| ||||| ||||| || ||||| ||||| Sbjct 38927700 GACACCATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 38927759 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||||| || || | || ||| ||||| ||||| || | ||| ||| ||| ||||| || Sbjct 38927760 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAG-AACTCTAGCTGATTACAA 38927818 Query 24170 CATTCAAAAAGAATCTACAATTCAT 24194 ||| || || || || || ||||| Sbjct 38927819 CATCCAGAAGGAGTCGACTCTTCAT 38927843 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||||| | || || ||||| | || || || |||| ||| | || ||||| | Sbjct 26221410 AAAATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACGATAACCCTAGAGGTCGAATCA 26221351 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||| ||||| | ||||| ||||| ||||| ||||| || || || || Sbjct 26221350 TCCGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGAC 26221291 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| ||||||| | || ||| ||||| |||||||| | || | | ||| || Sbjct 26221290 CAGCAGCGACTGATCTTCGCCGGGAAGCAGCTCGAAGACGGGAGGACGCTGGCCGACTAC 26221231 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||| || || || || || |||| | ||| || | ||||||||||| Sbjct 26221230 AACATCCAGAAGGAGTCGACGCTTCACCTGGTGCTACGCCTGAGAGGAGGA 26221180 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || ||||| || | || || || |||| ||| |||| || || | | Sbjct 34300227 ATGCAGATCTTCGTAAAGACTCTCACCGGGAAGACGATCACCCTCGAGGTGGAAAGCTCC 34300286 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| ||||| || || |||||||| || || ||||| Sbjct 34300287 GACACCATCGACAACGTCAAAGCCAAGATCCAGGATAAGGAAGGCATTCCCCCGGATCAG 34300346 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | || ||| ||||| || ||||| | |||| || || || ||| Sbjct 34300347 CAGAGGTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGTAGAACTCTCGCTGACTACAAC 34300406 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || || || ||||| | || || ||||| Sbjct 34300407 ATCCAGAAGGAGTCTACTCTCCACTTGGTGTT 34300438 >seq15 Length=50573455 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || ||||| | || ||| |||| || || | Sbjct 31711459 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 31711400 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| |||||| ||||| |||||||| ||||||||||| Sbjct 31711399 GACACCATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGCATCCCTCCCGATCAG 31711340 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||||| || || | || || ||||| |||||||| | || ||| | || || || || Sbjct 31711339 CAGAGGCTCATCTTCGCTGGAAAGCAGCTCGAAGACGGTAG-AACATTGGCTGACTACAA 31711281 Query 24170 CATTCAAAAAGAATCTACAATTCAT 24194 ||| || ||||| ||||| ||||| Sbjct 31711280 CATCCAGAAAGAGTCTACGCTTCAT 31711256 >seq13 Length=83567108 Score = 102 bits (112), Expect = 7e-17 Identities = 165/236 (70%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 23984 AAAC-AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042 |||| |||||||| | ||||| ||||| |||| || || |||| ||| | || |||| Sbjct 48378298 AAACGAAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCG 48378239 Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 | | ||||| ||||| | |||||| ||||| ||||| |||||||| || | Sbjct 48378238 AATCATCAGACACGATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCAC 48378179 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162 | ||||| ||| ||||||| | || ||| ||||| || ||||| | || | || | Sbjct 48378178 CGGATCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGAAGACGGGAGGACACTCGCGG 48378119 Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||| ||||| || || || || || |||| | || | | ||||||||||| Sbjct 48378118 ATTACAACATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCCGTCTGAGAGGAGGA 48378063 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || ||||| | || ||| |||| || || | | Sbjct 62906698 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCC 62906757 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| ||||| ||||| || ||||| || || ||||| Sbjct 62906758 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAG 62906817 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | || ||| ||||| || ||||| | ||||| | || ||||| ||| Sbjct 62906818 CAGAGGCTTATCTTCGCCGGAAAGCAGCTGGAAGACGGCAGAACCCTCGCTGATTACAAC 62906877 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || || || || || || ||||| Sbjct 62906878 ATCCAGAAGGAGTCGACTCTTCAT 62906901 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || || || |||| || || | || ||| |||| |||||| || Sbjct 21045704 AAGATGCAGATCTTCGTGAAGACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGTCC 21045645 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | ||||| ||||| ||||| |||||||| ||||| || Sbjct 21045644 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGAC 21045585 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 || ||| |||| || | || ||| ||||| ||||| || Sbjct 21045584 CAGCAGCGACTAATCTTCGCCGGAAAGCAGCTCGAGGA 21045547 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||||||| | ||||| | || || ||| Sbjct 62923887 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAAACCATTACTTTGGAGGTGGAGAGTTCA 62923946 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | || ||| |||||| || || || || || ||||| || || Sbjct 62923947 GATACCATCGACAATGTTAAAGCGAAGATTCAGGATAAGGAGGGTATTCCTCCTGACCAG 62924006 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | || |||||||| ||||||| | | | || || ||| Sbjct 62924007 CAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGATGGGCGTACTCTTGCTGACTACAAC 62924066 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||||||| ||||||||| |||| || || ||| Sbjct 62924067 ATTCAAAAGGAATCTACACTTCACTTGGTCTTA 62924099 >seq4 Length=33175494 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| |||| || ||| | || ||| |||| |||||| || Sbjct 1089943 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTCGAGGTCGAGTCC 1089884 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | ||||| ||||| ||||| |||||||| || || || Sbjct 1089883 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGAC 1089824 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | ||||| | || ||| ||||| ||||| || | || | | || ||| || Sbjct 1089823 CAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGAGGACCCTCGCCGACTAC 1089764 Query 24168 AACATTCAAAAAGAATCTACAATTCA 24193 ||||| || || || || || |||| Sbjct 1089763 AACATCCAGAAGGAGTCGACGCTTCA 1089738 >seq7 Length=28547970 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| | || || || | || ||| |||| |||||| || Sbjct 20573841 AAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGGTCGAGTCC 20573900 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | ||||| ||||| ||||| |||||||| ||||| || Sbjct 20573901 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGAC 20573960 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| ||||||| | || ||| || || |||||||| | | | | || ||| || Sbjct 20573961 CAGCAGCGACTGATCTTCGCCGGGAAACAGCTCGAAGACGGGCGTACCCTCGCCGACTAC 20574020 Query 24168 AACATTCAAAAAGAATCTACAATTCAT 24194 ||||| || || || || || ||||| Sbjct 20574021 AACATCCAGAAGGAGTCGACGCTTCAT 20574047 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||||| | ||||| ||||| |||| || || |||| ||| | || ||||| | Sbjct 12159833 AAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATCA 12159774 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||| ||||| | ||||| |||||| ||||| ||||| || || || || Sbjct 12159773 TCCGACACGATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGTATCCCGCCGGAC 12159714 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | ||||| | || ||| ||||| || || || | || | || || || Sbjct 12159713 CAGCAGCGTCTGATATTCGCCGGGAAGCAGCTGGAGGACGGGAGGACGCTCGCGGACTAC 12159654 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||| || || || || || |||| || ||| | | ||||||||||| Sbjct 12159653 AACATCCAGAAGGAGTCGACGCTTCACTTGGTGCTCCGTCTGAGAGGAGGA 12159603 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||||||||| ||||| || ||||||||||| ||||| | || || |||||||| ||| Sbjct 9161020 GACAAAGAAGGAATACCGCCGGATCAACAGAGGCTGATATTCGCTGGGAAGCAACTAGAA 9161079 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| |||| | | || || ||||| || ||||| || || |||| || || || Sbjct 9161080 GATGGTAGAACCCTTGCGGACTACAACATCCAGAAAGAGTCAACGCTTCACTTGGTCTTG 9161139 Query 24204 AG 24205 || Sbjct 9161140 AG 9161141 >seq3 Length=43957692 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/205 (71%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 23984 AAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042 || |||| ||||| | || || ||||| | || || || | || ||| ||||||||| Sbjct 13791097 AAGCAAAGATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACAATCACCCTCGAAGTCG 13791156 Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 || || |||||||||||| | ||||| ||||| ||||| |||||||| |||| Sbjct 13791157 AGTCCTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTC 13791216 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162 | || || ||| ||||||| | || ||| ||||| || || || | | | | || || Sbjct 13791217 CGGACCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGAGGACGGACGCACCCTCGCCG 13791276 Query 24163 ATTATAACATTCAAAAAGAATCTAC 24187 | || ||||| || || || || || Sbjct 13791277 ACTACAACATCCAGAAGGAGTCCAC 13791301 >seq14 Length=28343526 Score = 91.5 bits (100), Expect = 1e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| |||| || || | || || |||| || ||| || Sbjct 22849813 AAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACACTCGAGGTGGAGTCC 22849754 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | |||||| ||||| ||||| |||||||| ||||| ||| Sbjct 22849753 TCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGAT 22849694 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 || ||| | |||| | || ||| || || |||||||||| Sbjct 22849693 CAGCAGCGTTTGATCTTCGCCGGTAAACAGCTCGAAGATG 22849654 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| | || || || | || ||| |||| ||||| || Sbjct 25722109 AAGATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACAATAACCCTCGAGGTCGAATCC 25722050 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | ||||| ||||| ||||| |||||||| || || || Sbjct 25722049 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCGGAC 25721990 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | ||||| | || ||| ||||| ||||| || | | | | || ||| || Sbjct 25721989 CAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTAC 25721930 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||| || || || || || Sbjct 25721929 AACATCCAGAAGGAGTCGAC 25721910 >seq5 Length=38841276 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||||||||| ||||| || || ||||| || || || | || ||| ||||| |||||| Sbjct 4761492 GACAAAGAAGGTATACCACCAGACCAACAAAGGCTCATCTTCGCCGGTAAGCAGCTCGAA 4761433 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 || | ||||| | | |||||| ||||| || ||||| ||||| ||||| | || || Sbjct 4761432 GACGGCAGAACCCTAGCCGATTACAACATCCAGAAAGAGTCTACTCTTCATCTCGTCTTG 4761373 Query 24204 AG 24205 || Sbjct 4761372 AG 4761371 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||| | || ||||| |||| ||| | || || || | Sbjct 24921792 ATGCAGATCTTCGTTAAGACACTCACGGGAAAGACGATCACCCTTGAGGTGGAAAGCTCT 24921851 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| |||||| ||||| || || || ||||| ||||| Sbjct 24921852 GACACCATCGACAATGTTAAAGCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAG 24921911 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | || ||| ||||| ||||| || | |||| | | |||||| ||| Sbjct 24921912 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGGAGAACCCTAGCCGATTACAAC 24921971 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 24921972 ATCCAGAAGGAGTCGAC 24921988 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || ||||| ||||| |||| || |||| || ||| | | Sbjct 24922020 ATGCAGATCTTTGTCAAGACCTTAACGGGAAAGACGATCACACTCGAGGTGGAGAGCTCC 24922079 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || || || || ||||| || Sbjct 24922080 GACACCATCGATAACGTCAAGGCTAAGATACAGGACAAGGAGGGAATCCCGCCCGACCAG 24922139 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | | ||||||||| | || |||| | | | ||| || ||| Sbjct 24922140 CAGCGTTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACATTGGCCGACTACAAC 24922199 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || || || ||||| | |||||| | || | ||||| Sbjct 24922200 ATTCAGAAGGAGTCGACTCTTCATCTCGTGTTACGTCTGCGTGGAGG 24922246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| | || ||||| | || ||| |||| || ||| | | Sbjct 24217136 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGAGCTCC 24217195 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| || || || || || ||||| ||||| Sbjct 24217196 GACACCATCGACAACGTTAAGGCCAAGATTCAGGATAAGGAGGGAATCCCTCCGGATCAG 24217255 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | || ||||||||| | ||||| | |||| | | || || ||| Sbjct 24217256 CAGAGGCTTATCTTCGCCGGCAAGCAGTTGGAAGACGGGAGAACCTTGGCTGACTACAAC 24217315 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || || || ||||| |||| || || Sbjct 24217316 ATCCAGAAGGAGTCTACGCTTCACTTGGT 24217344 >seq12 Length=60369500 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/143 (74%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 24005 AAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCA 24064 |||| | ||| | |||| | | || ||| |||| |||||| || |||||||||||| | Sbjct 37443548 AAAACCCTTACCGGGAAGACC-ATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAA 37443606 Query 24065 AGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTA 24124 ||||| ||||| ||||||||||| || ||||| ||||| ||| || |||| | Sbjct 37443607 TGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAGCAGCGATTGATCTT 37443666 Query 24125 CGGCGGCAAGCAACTCGAAGATG 24147 || || || || |||||||||| Sbjct 37443667 CGCTGGAAAACAGCTCGAAGATG 37443689 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| |||||||| || ||||| | || || | || || ||| | | Sbjct 48264772 ATGCAGATTTTTGTTAAAACATTGACGGGAAAGACTATCACTTTGGAGGTTGAGAGCTCC 48264831 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| ||||| |||||||| || || || || || || Sbjct 48264832 GACACCATTGACAATGTCAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCGGACCAG 48264891 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAACGTCAGC-GATTATA 24168 ||||| |||| | || |||||||||||||| ||| ||| | | | || ||||| | Sbjct 48264892 CAGAGGTTGATCTTCGCAGGCAAGCAACTCGAGGATGGACGTACTCTT--GCTGATTACA 48264949 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| || || || || || |||| || || || Sbjct 48264950 ACATCCAGAAGGAGTCGACTCTTCACTTGGTCTT 48264983 >seq4606 Length=3131 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||||||||| ||||| || ||||||||||| ||||| | || || |||||||| ||| Sbjct 492 GACAAAGAAGGAATACCGCCGGATCAACAGAGGCTGATATTCGCTGGGAAGCAACTAGAA 433 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| |||| | | || || ||||| || ||||| || || |||| || || || Sbjct 432 GATGGTAGAACCCTTGCGGACTACAACATCCAGAAAGAGTCAACGCTTCACTTGGTCTTG 373 Query 24204 AG 24205 || Sbjct 372 AG 371 >seq6 Length=38054609 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | || ||||| | || ||| | || || || | Sbjct 21964704 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 21964763 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| |||||| ||||| |||||||| ||||| ||||| Sbjct 21964764 GACACCATCGACAACGTTAAAGCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAG 21964823 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | || ||| ||||| | ||||| | ||| | | | ||||| || Sbjct 21964824 CAGAGGCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGCAGGACCTTGGCTGATTACAAT 21964883 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || ||||| Sbjct 21964884 ATCCAGAAGGAGTCTAC 21964900 >seq18 Length=77673080 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || || || | || ||| | ||||| ||| | Sbjct 62463572 ATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATAACCTTGGAAGTTGAGAGCTCA 62463631 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| ||||| ||||| || ||||| || ||| Sbjct 62463632 GACACAATCGACAATGTGAAGGCTAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAA 62463691 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||||| || | || || || || || || |||| || || | || ||||| || Sbjct 62463692 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTAG-GACTTTGGCTGATTACAA 62463750 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| || || || || || |||| ||||| Sbjct 62463751 CATCCAGAAGGAGTCGACTCTTCACTTAGT 62463780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429884932470630