Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq10 122 8e-23 seq6 122 8e-23 seq5 120 3e-22 seq1 118 9e-22 seq13 114 1e-20 seq9 114 1e-20 seq12 113 4e-20 seq18 107 2e-18 seq17 100 2e-16 seq14 82.4 7e-11 >seq10 Length=22354415 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||||||||||| | || || | || || ||| ||| Sbjct 21869883 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAAACAATTACCTTGGAGGTTGAGAGCTCT 21869942 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| ||||||| | ||| || || ||||| || ||||| || Sbjct 21869943 GACACGATTGACAACGTCA---AAGCAAAGATTCA-GGAGAAGGAAGGCATCCCACCAGA 21869998 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| | | || || || || || || | || |||| ||||||| | | ||||| Sbjct 21869999 CCAGCAGAGACTCATCTTCGCAGGGAAGCAGCTGGAGGATGGTCGCACTCTCGCGGATTA 21870058 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || ||||| || |||||||| ||| | ||||| | || ||||| || Sbjct 21870059 CAACATCCAAAAGGAGTCCACGCTCCATCTTGTGCTTCGTCTGAGAGGTGG 21870109 Score = 118 bits (130), Expect = 9e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| ||||||||||| || || | || || | ||||| || || Sbjct 21870338 AATGCAAATATTTGTGAAGACTTTGACAGGCAAGACTATTACCTTGGAAGTTGAAAGCTC 21870397 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| |||| || || | ||| ||||| ||||||||||| || |||| Sbjct 21870398 AGACACAATCGACAATGTGAAGGCTAAGATTCA-GGACAAGGAAGGGATTCCTCCGGACC 21870456 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| | | || || || || ||||| | || |||| |||||| | | ||||||| Sbjct 21870457 AACAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACGCTTGCAGATTACA 21870516 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| || || || || || ||||| || || Sbjct 21870517 ACATTCAGAAGGAGTCGACTCTGCATTTGGTTCT 21870550 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || ||| |||| || | || |||||| ||| Sbjct 21870111 ATGCAGATTTTCGTCAAGACCCTCACAGGAAAAACCATTACTCTTGAGGTGGAGAGCTCT 21870170 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || || ||||| |||||||| ||||| ||||| Sbjct 21870171 GACACGATTGACAATGTGAAGGCGAAGATACAGGACAAGGAAGGGATCCCACCAGACCAG 21870230 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || || || || ||||| | || |||| ||| || | | ||||||||| Sbjct 21870231 CAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGTACGCTTGCGGATTACAAT 21870290 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || || || || Sbjct 21870291 ATTCAGAAGGAGTCTACCCTTCA 21870313 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | ||||| || |||| || |||| || ||| ||| Sbjct 21869655 ATGCAAATTTTCGTGAAAACGCTCACCGGCAAGACCATTACTCTCGAGGTCGAGAGCTCT 21869714 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || | ||| || ||| ||||| ||||||||||| || ||||| Sbjct 21869715 GACACCATCGA-TAACGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCTCCGGACCA 21869773 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || || || || || | ||||||| | ||| | | || ||||| Sbjct 21869774 GCAGAGGCTCATCTTCGCGGGTAAGCAGCTTGAAGATGGAAGGACTCTCGCTGACTACAA 21869833 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || ||||| || || || Sbjct 21869834 CATCCAGAAGGAATCGACTCTCCA 21869857 >seq6 Length=38054609 Score = 122 bits (134), Expect = 8e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||| | ||||| || |||||||| | || || ||| || Sbjct 21965388 ATGCAGATATTTGTGAAGACCCTTACCGGCAAGACCATCACATTGGAGGTTGAGAGTTCG 21965447 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | || ||||| || ||| ||||| ||||| || || || ||||| Sbjct 21965448 GACACTATTGA-TAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCA 21965506 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || |||||||| | || |||| ||| ||| ||| || ||||| Sbjct 21965507 GCAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAA 21965566 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || || || || || || ||||||||||| Sbjct 21965567 CATCCAGAAGGAGTCTACTCTCCACTTGGTGCTAAGGCT 21965605 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||| || | ||||| | || |||||| ||| Sbjct 21964932 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACTATCACTTTGGAGGTGGAGAGCTCT 21964991 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | || | ||| || ||| || || || || || ||||| ||||| Sbjct 21964992 GACACTATTGA-TAACGTCAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCA 21965050 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || |||||||||||||| | || |||| | ||| | | || ||||| Sbjct 21965051 GCAGAGGCTCATCTTTGCCGGCAAACAGCTGGAGGATGGAAGGACTCTTGCTGACTACAA 21965110 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || || || || ||| | || || ||||| Sbjct 21965111 CATCCAGAAGGAGTCTACTCTCCATCTCGTCCTCAGGCT 21965149 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || | || || | || |||||| ||| Sbjct 21965160 ATGCAAATTTTTGTCAAGACTTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTCT 21965219 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| || ||| ||||| || || || || || ||||| Sbjct 21965220 GACACTATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCGGACCAG 21965279 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || || || |||| | ||| | | || ||||| Sbjct 21965280 CAGAGGTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGAACTCTAGCTGACTACAAC 21965339 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||| || || || || || || | | ||| | ||||| Sbjct 21965340 ATTCAGAAAGAGTCGACTCTCCACTTGGTCTTGCGTCTACGTGGAGG 21965386 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| | ||||| || ||||||| | || ||||| ||| Sbjct 21964704 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 21964763 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | | |||| || | ||| ||||| ||||| ||||| ||||| || Sbjct 21964764 GACACCATCGACAACGTTAAAGCCAAGATTCAG-GACAAGGAAGGCATTCCTCCTGATCA 21964822 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || ||||| || || || ||||| | | || ||| |||||||| Sbjct 21964823 GCAGAGGCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGCAGGACCTTGGCTGATTACAA 21964882 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||| || || || || ||||| || Sbjct 21964883 TATCCAGAAGGAGTCTACGCTCCA 21964906 >seq5 Length=38841276 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||||||| || | ||||| | || || ||| ||| Sbjct 24217364 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATCACTTTGGAGGTTGAGAGCTCT 24217423 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| || || || || || ||||| |||| Sbjct 24217424 GACACTATTGA--CAATGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACC 24217481 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | || |||||||| || || || ||||||| |||||| ||| ||||||| Sbjct 24217482 AGCAGAGGTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGTCGCACCTTGGCGGATTACA 24217541 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | ||||| ||||| || || || || || || | | ||| | ||||| Sbjct 24217542 ACATTCAGAAAGAGTCAACTCTTCACTTGGTCTTGCGTCTACGTGGAGG 24217590 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| || || || || | |||||| |||| |||||| || Sbjct 24922020 ATGCAGATCTTTGTCAAGACCTTAACGGGAAAGACGATCACACTCGAGGTGGAGAGCTCC 24922079 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || | ||| || || ||||| || || || || || ||||| Sbjct 24922080 GACACCATCGA-TAACGTCAAGGCTAAGATACAGGACAAGGAGGGAATCCCGCCCGACCA 24922138 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || || || |||| ||| || ||| ||| ||||| Sbjct 24922139 GCAGCGTTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACATTGGCCGACTACAA 24922198 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || || || || ||| | ||| || | || | ||||| Sbjct 24922199 CATTCAGAAGGAGTCGACTCTTCATCTCGTGTTACGTCTGCGTGGAGG 24922246 >seq1 Length=45320942 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || || | ||||| | || |||||| || Sbjct 18861561 ATGCAAATCTTCGTCAAGACTTTGACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTCC 18861502 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| |||||| ||||| || || ||||| || ||||| Sbjct 18861501 GACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 18861442 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| || || || || ||||| ||||||| | || ||| ||||||||| Sbjct 18861441 CAGAGGCTTATCTTCGCTGGAAAGCAATTGGAAGATGGCAGGACCTTGGCCGATTACAAC 18861382 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||||| || || || ||||| || || || || ||||| Sbjct 18861381 ATTCAGAAGGAGTCTACGCTTCACTTGGTCCTCAGGCT 18861344 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || || | ||||| | || || || || Sbjct 18861789 ATGCAAATCTTCGTTAAGACTTTGACGGGAAAGACTATCACTTTGGAGGTTGAAAGCTCC 18861730 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || |||| |||| || ||| |||||||| || || ||||| || Sbjct 18861729 GACACTATTGACAACGTCA---AAGC-CAAGATCCAAGACAAAGAGGGTATCCCACCGGA 18861674 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| || | || ||||| || || || | || |||| |||||| ||| ||||| Sbjct 18861673 CCAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGATTA 18861614 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| || || || || || ||||| || || || Sbjct 18861613 CAACATCCAGAAGGAGTCTACGCTTCACTTGGT 18861581 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| ||||||| || | ||||| | || || || || Sbjct 18862017 ATGCAGATCTTTGTTAAAACTCTGACCGGAAAGACGATCACTTTGGAGGTTGAAAGCTCC 18861958 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| || ||| || || || || || ||||| ||||| Sbjct 18861957 GATACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAG 18861898 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || || || |||| | ||| | | ||| ||||| Sbjct 18861897 CAGAGGCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGAACTCTTGCCGACTACAAC 18861838 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || || || || ||| | || || ||||| Sbjct 18861837 ATCCAGAAGGAGTCGACTCTTCATCTCGTCCTCAGGCT 18861800 >seq13 Length=83567108 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || ||| |||| || | || |||||| || Sbjct 62923887 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAAACCATTACTTTGGAGGTGGAGAGTTCA 62923946 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || |||| || | ||| || || || || ||||| |||||| Sbjct 62923947 GATACCATCGA--CAATGTTAAAGCGAAGATTCA-GGATAAGGAGGGTATTCCTCCTGAC 62924003 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || ||||| || || ||| | ||||||| || ||| | | || ||| Sbjct 62924004 CAGCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGATGGGCGTACTCTTGCTGACTAC 62924063 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| ||||| || || || || || || | ||| | || || Sbjct 62924064 AACATTCAAAAGGAATCTACACTTCACTTGGTCTTACGTCTACGTGGGGG 62924113 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || | || || | || |||||| || Sbjct 62907154 ATGCAGATCTTTGTCAAGACGTTGACGGGAAAGACTATTACTTTGGAGGTGGAGAGCTCC 62907213 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || ||||||| | || |||||||| || ||||| || ||| Sbjct 62907214 GACACCATTGA--CAATGTCAAAGCAAAGATCCAA-GACAAAGAGGGTATTCCTCCGGAC 62907270 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || ||||||||||| || | || |||| | ||| | | || ||| Sbjct 62907271 CAGCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGAAGAACTCTTGCTGACTAC 62907330 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || || || || || || || || | | ||| | ||||| Sbjct 62907331 AACATTCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGTCTACGTGGAGG 62907380 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || ||| | ||||| || ||||||| | || ||||| || Sbjct 39907727 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCC 39907786 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | | |||| || | || || || || || ||||| || || || Sbjct 39907787 GACACCATCGACAACGTTAAAGCCAAGATCCAG-GATAAGGAGGGCATTCCTCCGGATCA 39907845 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| || ||||| || || || ||||||| | || | | |||||||| Sbjct 39907846 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGATGGCAGGACCCTTGCTGATTACAA 39907905 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||| || || ||||| || || || || || || ||||| Sbjct 39907906 TATCCAGAAGGAATCGACCCTCCACTTGGTCCTCAGGCT 39907944 >seq9 Length=62778564 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || |||| || | ||||||||| || Sbjct 30454745 ATGCAGATCTTTGTCAAGACCCTTACCGGGAAGACCATTACTCTAGAAGTGGAGAGTTCC 30454804 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || |||| |||||| ||||||||||| ||||| || ||||| Sbjct 30454805 GACACTATTGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGACCAG 30454864 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | || |||| ||| || ||| || ||||| Sbjct 30454865 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAC 30454924 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 ||||| || || || || || || || ||| || Sbjct 30454925 ATTCAGAAGGAGTCGACTCTTCACTTGGTGTTA 30454957 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/189 (70%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 25002 CAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGAC 25061 || || || || || || | ||||| || ||||||| |||| || ||||| || ||| Sbjct 43527513 CAGATCTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTCGAGTCCTCCGAC 43527454 Query 25062 ACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAAC 25119 || ||||| || || ||| || ||| ||||||||||| || || || || || | Sbjct 43527453 ACCATCGA--CAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAGC 43527396 Query 25120 AGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATA 25179 |||| | || || || || ||||| | ||||||| || ||| ||| || ||||| | Sbjct 43527395 AGCGATTGATCTTCGCTGGAAAACAGCTCGAAGATGGCCGTACTCTGGCTGACTACAACA 43527336 Query 25180 TTCAAAAAG 25188 | || |||| Sbjct 43527335 TCCAGAAAG 43527327 >seq12 Length=60369500 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||||||||| || || ||||||| | ||||||||| || Sbjct 48265000 ATGCAGATATTTGTCAAGACTTTGACAGGAAAGACCATCACTCTAGAAGTGGAGAGTTCC 48265059 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| | || |||| ||| |||||||| || ||||| || || Sbjct 48265060 GACACCATAGACAACGTCA---AGGCCAAAATTCA-GGACAAAGAGGGTATTCCTCCAGA 48265115 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || || || || || || | || |||| |||||| ||| || || Sbjct 48265116 CCAGCAGCGTCTCATCTTCGCTGGGAAGCAGCTCGAGGATGGTCGCACCTTGGCTGACTA 48265175 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || || || || || || || || ||| | | ||| | ||||| Sbjct 48265176 CAACATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTACGTGGAGG 48265226 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | ||||| || | |||||| | || || ||| || Sbjct 48265228 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAGACTATCACATTGGAGGTTGAGAGCTCC 48265287 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| |||||||| || ||||||||||| || Sbjct 48265288 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAAGAGGGTATTCCACCTGATCAG 48265347 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || || ||||| ||| | || |||| |||||| ||| || ||||| Sbjct 48265348 CAAAGGTTGATCTTCGCAGGCAAGCAACTTGAGGATGGTCGCACCTTGGCAGACTACAAC 48265407 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || || || Sbjct 48265408 ATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 48265439 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/189 (70%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 25002 CAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGAC 25061 || || || || || || | ||||| || ||||||| |||| || ||||| || ||| Sbjct 37443536 CAGATCTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTCGAGTCCTCCGAC 37443595 Query 25062 ACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAAC 25119 || ||||| || || ||| || ||| ||||||||||| || || || || || | Sbjct 37443596 ACCATCGA--CAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAGC 37443653 Query 25120 AGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATA 25179 |||| | || || || || ||||| | ||||||| || ||| ||| || ||||| | Sbjct 37443654 AGCGATTGATCTTCGCTGGAAAACAGCTCGAAGATGGCCGTACTCTGGCTGACTACAACA 37443713 Query 25180 TTCAAAAAG 25188 | || |||| Sbjct 37443714 TCCAGAAAG 37443722 >seq18 Length=77673080 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || | || || | ||||| ||| || Sbjct 62463572 ATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATAACCTTGGAAGTTGAGAGCTCA 62463631 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| |||| || || | ||| ||||| |||||||| || || ||||| Sbjct 62463632 GACACAATCGACAATGTGAAGGCTAAGATTCA-GGACAAGGAAGGGATCCCTCCGGACCA 62463690 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | || || || || ||||| | || |||| | | ||| ||| |||||||| Sbjct 62463691 ACAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTAGGACTTTGGCTGATTACAA 62463750 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || ||||| || Sbjct 62463751 CATCCAGAAGGAGTCGACTCTTCACTTAGTTCT 62463783 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || ||| ||||||| | || |||||| || Sbjct 62463344 ATGCAGATTTTCGTGAAGACCCTCACAGGCAAAACCATCACTCTTGAGGTGGAGAGCTCA 62463403 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| | ||||| | ||| ||||| |||||||| ||||| || Sbjct 62463404 GACACGATTGACAACGTCA---AGGCAAAGATTCAG-GACAAGGAAGGGATCCCACCAGA 62463459 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| | | || || || || ||||| | || |||| ||| || | | ||||| Sbjct 62463460 CCAGCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGTACGCTTGCGGATTA 62463519 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||||||||| || ||||| || || || Sbjct 62463520 CAATATTCAGAAGGAATCTACCCTTCA 62463546 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || ||||||| |||| || || || Sbjct 62462660 ATGCAGATCTTTGTCAAGACTTTGACAGGCAAGACCATCACCCTCGAGGTCGAAAGCTCC 62462719 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| ||||| || || || ||||| Sbjct 62462720 GACACGATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 62462779 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| || ||||| || || |||| |||| | || | | || ||||| Sbjct 62462780 CAGAGGCTTATCTTCGCCGGGAAGCAGCTAGAGGATGGAAGGACGCTCGCTGACTACAAC 62462839 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || |||||||| || || || || Sbjct 62462840 ATCCAAAAAGAGTCGACACTCCA 62462862 >seq17 Length=44223734 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || | ||||| | || || ||| || Sbjct 34300455 ATGCAGATCTTTGTCAAGACACTGACGGGAAAGACGATCACTCTAGAGGTCGAGAGTTCC 34300514 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| || ||| ||||| ||||| ||||| || ||||| Sbjct 34300515 GACACCATTGACAACGTGAAAGCCAAGATCCAAGACAAGGAAGGTATTCCTCCGGACCAG 34300574 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| ||| || ||| || ||||| Sbjct 34300575 CAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAC 34300634 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208 ||||| || || ||||| || ||||| ||| Sbjct 34300635 ATTCAGAAGGAGTCCACTCTTCATTTGGTG 34300664 >seq14 Length=28343526 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||||||||| |||||||| |||||||| || | || || ||||| || || | ||| Sbjct 4186453 GACAAAGAAGGTATTCCACCAGACCAACAAAGGCTCATCTTCGCCGGTAAGCAGCTTGAA 4186394 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || | || || | | ||||||||| || || ||||| || ||||| ||| | || | Sbjct 4186393 GACGGCCGAACCCTAGCCGATTACAACATCCAGAAAGAGTCTACGCTTCATCTCGTCTTG 4186334 Query 25212 AGGCT 25216 ||||| Sbjct 4186333 AGGCT 4186329 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||||||||| |||||||| |||||||| || | || || ||||| || || | ||| Sbjct 4191057 GACAAAGAAGGTATTCCACCAGACCAACAAAGGCTCATCTTCGCCGGTAAGCAGCTTGAA 4190998 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || | || || | | ||||||||| || || ||||| || ||||| ||| | || | Sbjct 4190997 GACGGCCGAACCCTAGCCGATTACAACATCCAGAAAGAGTCTACGCTTCATCTCGTCTTG 4190938 Query 25212 AGGCT 25216 ||||| Sbjct 4190937 AGGCT 4190933 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||||||||| |||||||| |||||||| || | || || ||||| || || | ||| Sbjct 4201069 GACAAAGAAGGTATTCCACCAGACCAACAAAGGCTCATCTTCGCCGGTAAGCAGCTTGAA 4201010 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || | || || | | ||||||||| || || ||||| || ||||| ||| | || | Sbjct 4201009 GACGGCCGAACCCTAGCCGATTACAACATCCAGAAAGAGTCTACGCTTCATCTCGTCTTG 4200950 Query 25212 AGGCT 25216 ||||| Sbjct 4200949 AGGCT 4200945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433276529570990