Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8 132 6e-26 seq12 120 4e-22 seq16 116 5e-21 seq2 116 5e-21 seq47 113 6e-20 seq17 113 6e-20 seq5 113 6e-20 seq18 111 2e-19 seq13 111 2e-19 seq6 111 2e-19 seq14 107 2e-18 >seq8 Length=29345952 Score = 132 bits (146), Expect = 6e-26 Identities = 332/498 (67%), Gaps = 20/498 (4%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || ||||| || ||||| | || | ||| ||||| |||||| | | ||| || || Sbjct 28985217 CGGTCAAAACGCCCTGGTCTCAGCAAGGCGGAGTCAAGAATATCAGCTCTATTAGTAGCA 28985158 Query 15945 GCGATGACAACAATACCTGTTTCGTTA---TCAAAACCATCCATCTCTGTCAAAAGCTGG 16001 || | |||| || ||| || |||| ||||| ||||||||||| ||||| ||||| Sbjct 28985157 GCAACAACAATAACACCAGT---GTTACCCTCAAACCCATCCATCTCAGTCAAGAGCTGA 28985101 Query 16002 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTT 16058 || | ||| || || | ||||||||| || |||| |||| | | ||| | Sbjct 28985100 TTCAAAGTCTGCTCTCTTTCATCATTACCT---CCACCAATCCCAGTCCCTCTCTGCCTA 28985044 Query 16059 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 16118 || || ||||||||||| || | ||||| || || || ||| || ||| | Sbjct 28985043 CCAACAGCATCAATCTCGTCCACAAAGACAATACACGGAGCATTCTCATTAGCCTTATTG 28984984 Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 16178 || ||||| || || | | || || ||||||||||||||||| ||||| | | | Sbjct 28984983 AAAAGATCACGCACCCTCGAAGCACCAACACCAACAAACATCTCAACAAACTCAGACCCC 28984924 Query 16179 GAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 16237 | | || | || ||| || ||| | |||||| ||||||||| ||| | ||||| || Sbjct 28984923 G-AGATGGAGAAGAAAGGCACACCGGCTTCACCAGCAATGGCTTTGGCCAAGAGAGTTTT 28984865 Query 16238 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAA 16297 ||| ||||| || ||| |||| || ||||| || ||| || || || Sbjct 28984864 ACCAGTACCAGGAGGACCAACGAGAAGAACACCTTTAGGGATCCGAGCACCGACCGCAGT 28984805 Query 16298 GTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCC---AATTCATCTTTGGCGGC 16354 | | |||||||| | ||| ||||| ||||| | ||||| || |||| ||||| | Sbjct 28984804 GAACCTCTCAGGCTTCTTGAGAAACTCCAC---CACTTCCATGAAGTCATGCTTGGCTTC 28984748 Query 16355 GTCAATCCCCTCAACATC 16372 || | || ||||||| Sbjct 28984747 ATCGACTCCAGCAACATC 28984730 >seq12 Length=60369500 Score = 120 bits (132), Expect = 4e-22 Identities = 297/446 (67%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || ||||| || || || | ||| | ||| ||||| |||||| | | || ||||| Sbjct 11969693 CGGTCAAAACGGCCGGGTCTAAGCAAGGCGGAGTCAAGAATATCAGCTCTGTTGGTTGCA 11969634 Query 15945 GCGATGACAACAATACC--TGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 || | || | || ||| |||| | || |||||||||||||||| |||| |||||||| Sbjct 11969633 GCAACAACGATAACACCAGTGTTACCTT--CAAAACCATCCATCTCCGTCAGAAGCTGGT 11969576 Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCA 16062 ||| || ||||| | ||||||||| || | ||||| | | |||| | || | Sbjct 11969575 TAAGCGTCTGTTCTCTTTCATCATTACCTCCACCAATACCAGTTCCTCTTTGCCTACCAA 11969516 Query 16063 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGA 16122 | |||||||||||||| | ||||| || || || || || || || || | Sbjct 11969515 CAGCATCAATCTCATCCACAAAGACAATACAAGGAGCGTTCTCCTTGGCCTTTTTGAAAA 11969456 Query 16123 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182 |||| || || | | || || ||||| ||||||||||| ||||| | | | | | Sbjct 11969455 GATCACGGACCCTCGAAGCACCAACACCGACAAACATCTCAACAAACTCAGAACCCG-AG 11969397 Query 16183 ATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241 || | | ||| || || || |||||| |||||||| || | || || || || Sbjct 11969396 ATGGAAAAGAACGGTACGCCAGCTTCACCAGCAATGGCCTTTGCCAAGAGTGTTTTCCCA 11969337 Query 16242 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTAT 16301 ||||| || ||| | ||||| ||||| || ||| || || || | | Sbjct 11969336 GTACCGGGAGGACCAACTAGGAGAACACCTTTCGGGATCCGAGCACCGACCGCAGTGAAC 11969277 Query 16302 CTCTCAGGTTGCTTAAGAAAATCCAC 16327 |||||||| | ||| ||||| ||||| Sbjct 11969276 CTCTCAGGCTTCTTCAGAAACTCCAC 11969251 >seq16 Length=18736220 Score = 116 bits (128), Expect = 5e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| ||| | || | || ||||| || || || || ||||||||||| || || Sbjct 836792 CCTTTGCCGAGAGGATCGTGGCGTTTGCTTGCGTGGAAGGGATCTTCTTCTCGGGGAGCT 836851 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 ||||| | || | |||||||||||||| || |||||||| || ||| ||||||||||| Sbjct 836852 TCTGCTCGATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCGGGGCTCACCTTCTCCAACG 836911 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| ||||| | ||||| || || ||| Sbjct 836912 AGCTGATCTCGAGAGACGAAGGCCTGCAC 836940 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||| || ||| || || |||| || || || || || | ||||||||||| || || Sbjct 7908817 CCTTCGCGGAGAGAATCGTCGCCTTCGCCTGCGTCGAAAGGATCTTCTTCTCCGGCAGCT 7908876 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 |||| | || | | ||||||||| ||||| |||||||| ||| | ||||||||||| Sbjct 7908877 TCTGTACGATCTTCTTGCTCAAGAAACGAGGGCTCATGCCTGGTTTGACCTTCTCCAACG 7908936 Query 102292 AGCTTATCTCTCGTGACGAGGG 102313 || | |||||||| ||||| || Sbjct 7908937 AGTTGATCTCTCGAGACGAAGG 7908958 >seq2 Length=25468329 Score = 116 bits (128), Expect = 5e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 || || ||| | || | || || ||||| || || || ||||||||||| || |||| Sbjct 22243879 TTCGCCGAGAGGATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTTC 22243820 Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293 ||| | || | ||||||||||||||||| |||||||| || ||| ||||||||||||| Sbjct 22243819 TGCTCCATCTTCTGGCTCAAGAAGCGAGGGCTCATGCCGGGGCTCACCTTCTCCAACGAG 22243760 Query 102294 CTTATCTCTCGTGACGAGGGACTCCAC 102320 || ||||| || ||||| || || ||| Sbjct 22243759 CTGATCTCGCGGGACGAAGGCCTTCAC 22243733 >seq47 Length=709205 Score = 113 bits (124), Expect = 6e-20 Identities = 284/423 (67%), Gaps = 14/423 (3%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAA 15975 ||||| || || | | ||| ||||| || | || | ||||| |||| | || ||| Sbjct 641051 TCAAGAATGTCTGCTCTATTGGTTGCAGCAACAACGATGATACCAGTGTTACCTT--CAA 641108 Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035 | ||||||||||| || | ||||| || | ||| || || | ||||||||| || Sbjct 641109 ACCCATCCATCTCAGTTAGCAGCTGATTCAAAGTCTGCTCTCTTTCATCATTACCT---C 641165 Query 16036 TACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 |||| || | | | |||| | || || |||||||||||||| | ||||| |||| Sbjct 641166 CACCAATTCCTGTTCCTCTTTGCCTACCAACAGCATCAATCTCATCTACAAAGACAATGC 641225 Query 16093 ATGG-TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151 | || | | | | | | ||| ||| ||||| || || | | ||| || ||||| Sbjct 641226 AAGGAGCGTTCTCCTTGGCCTTCTTGAAA-AGATCACGGACCCTCGAGGCACCAACACCG 641284 Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 16210 ||||||||||| ||||| | | ||| | || | || ||| || ||| || |||||| Sbjct 641285 ACAAACATCTCAACAAACTCAGATCCGG-AGATGGAGAAGAAAGGCACACCAGCTTCACC 641343 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 ||||| ||| || | ||| ||||| || ||||| || ||| || || |||| Sbjct 641344 GGCAATAGCTTTCGCCAAAAGCGTCTTCCCAGTACCAGGAGGACCAATAAGCAGAACACC 641403 Query 16271 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAAT 16330 | || ||| ||| ||| || | | |||||||| | ||| ||||| ||||| | Sbjct 641404 TTTCGGGATCCGGGCACCAACCGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCAC 641463 Query 16331 CTC 16333 ||| Sbjct 641464 CTC 641466 >seq17 Length=44223734 Score = 113 bits (124), Expect = 6e-20 Identities = 256/378 (68%), Gaps = 14/378 (4%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCA--- 15974 ||||| | |||| | |||||| || || | |||| | ||| | |||| || Sbjct 18260800 TCAAGAACATCAGGTCTATTCGTAGCCGCCAAAACAATCACACCAGA---GTTACCAGAG 18260856 Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || ||||||||||| ||||| ||||| ||||| || || |||| ||||||||| || | Sbjct 18260857 AACCCATCCATCTCAGTCAACAGCTGATTAATCGTCTGCTCCCTCTCATCATTCCCT--C 18260914 Query 16035 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092 | ||| ||||| | | ||| | ||||| |||||||||||||| ||||| || |||| Sbjct 18260915 CTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCATCAATCTCATCGATGAAAACAATGC 18260974 Query 16093 ATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACC 16150 | || || | ||| ||||| | ||||| || || || | || || ||||| Sbjct 18260975 AAGGCGCCTTGGCCTTAGCCTTCTCAAACAAATCCC-TA-ACTCTAGACGCACCAACACC 18261032 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 16210 ||| || | ||||||||| | | || | ||| || ||| || || | ||| || Sbjct 18261033 AACGAAAAGCTCCACAAACTCAGAAGCCGCACAGGAGAAGAACGGCACTCCCGCTTCTCC 18261092 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 || | ||| | || | ||||||||||| || || || ||| | ||||| || Sbjct 18261093 AGCCACGGCCCTAGCTAACAGAGTCTTACCAGTCCCAGGAGGACCAACAAGGAGACACCC 18261152 Query 16271 TCGTGGAATCTTGGCGCC 16288 | |||||||| ||||| Sbjct 18261153 TTTAGGAATCTTAGCGCC 18261170 Score = 104 bits (114), Expect = 3e-17 Identities = 296/449 (66%), Gaps = 12/449 (3%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || ||||| || ||||| | || | || ||||| ||||| | | ||| ||||| Sbjct 43157840 CGGTCAAAACGCCCTGGTCTCAGCAAGGCAGAGTCAAGAATATCTGCTCTATTGGTTGCA 43157781 Query 15945 GCGATGACAACAATACCTGTTTCGTTA---TCAAAACCATCCATCTCTGTCAAAAGCTGG 16001 || | |||| || ||| || |||| ||||| ||||||||||| ||||| ||||| Sbjct 43157780 GCAACCACAATAACACCAGT---GTTACCCTCAAACCCATCCATCTCAGTCAAGAGCTGA 43157724 Query 16002 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTC 16059 |||| || || || | ||||||||| || | | | |||| | | ||| | | Sbjct 43157723 TTAAGCGTCTGCTCTCTTTCATCATTACCT--CCACCGATTCCAGTTCCCCTCTGCCTAC 43157666 Query 16060 CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAA 16119 | || ||||||||||| || | || || ||||| || ||| || || || | Sbjct 43157665 CAACAGCATCAATCTCGTCCACAAAAACAATGCACGGAGCATTCTCCTTGGCCTTTTTGA 43157606 Query 16120 AGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 16179 | ||||| || || | | || || ||||| ||||||||||| ||||| | | | | Sbjct 43157605 AAAGATCACGGACCCTCGAAGCACCAACACCGACAAACATCTCAACAAACTCAGAACCCG 43157546 Query 16180 AACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 16238 | || | | ||| || ||| || |||||| || ||||| || | || || ||| Sbjct 43157545 -AGATGGAAAAGAAAGGTACACCAGCTTCACCAGCGATGGCCTTCGCCAAGAGGGTTTTA 43157487 Query 16239 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAG 16298 || ||||| || || | |||||| ||||| || ||| || ||| || | Sbjct 43157486 CCAGTACCAGGAGGGCCAACAAGGAGGACACCTTTCGGGATCCGAGCACCAACCGCAGTG 43157427 Query 16299 TATCTCTCAGGTTGCTTAAGAAAATCCAC 16327 | |||||||| | ||| ||||| ||||| Sbjct 43157426 AACCTCTCAGGCTTCTTCAGAAACTCCAC 43157398 >seq5 Length=38841276 Score = 113 bits (124), Expect = 6e-20 Identities = 282/420 (67%), Gaps = 20/420 (5%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAA 15975 ||||| ||||| | | ||| || || || | || | ||||| |||| | || ||| Sbjct 7899589 TCAAGAATATCTGCTCTATTAGTCGCAGCAACAACGATGATACCAGTGTTACCTT--CAA 7899646 Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035 | ||||||||||| ||||| |||||||| | ||| ||||| | |||||||| || Sbjct 7899647 ACCCATCCATCTCAGTCAACAGCTGGTTCAAAGTCTGTTCTCTCTCATCATTACCT---- 7899702 Query 16036 TACCACC-AGCACTG-----CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGA 16089 ||||| | | ||| | ||| | || || |||||||||||||||| ||||||| Sbjct 7899703 --CCACCAATCCCTGTCCCTCTCTGCCTCCCAACAGCATCAATCTCATCAACAAAGACGA 7899760 Query 16090 TGCATGG-TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148 |||| || | | | | | | ||| ||| ||||| || || | || || ||| Sbjct 7899761 TGCAAGGAGCGTTCTCCTTGGCCTTCTTGAAA-AGATCACGGACCCTGGAAGCACCAACA 7899819 Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 16207 || ||||||||||| || || | | ||| | |||| || ||| || ||| || ||| Sbjct 7899820 CCGACAAACATCTCAACGAACTCAGACCCGG-AGATTGAGAAGAACGGCACACCAGCTTC 7899878 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 ||| || || ||| || ||||| ||||| || ||||| || ||| || || | Sbjct 7899879 ACCAGCGATAGCTTTCGCCAGAAGCGTCTTCCCAGTACCGGGAGGACCAATAAGCAGAAC 7899938 Query 16268 ACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 16327 ||| || ||| || ||| || | | |||||||| | ||| ||||| ||||| Sbjct 7899939 ACCCTTCGGGATCCGAGCACCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCAC 7899998 >seq18 Length=77673080 Score = 111 bits (122), Expect = 2e-19 Identities = 142/195 (73%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 102126 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 102185 ||||| || | ||||| |||| |||| | ||| ||| | | || || ||| | Sbjct 68188488 AAGAAGGCCCAATGGGCCATGACGTGGATCGATGG---GTCCCAGACTTTCGCCGAGAGG 68188432 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 || | || || ||||| || || || ||||||||||| ||| ||||||| | || | Sbjct 68188431 ATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGTAGCTTCTGCTCGATCTTC 68188372 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 ||||||||||||||||| |||||||| || | ||||||||||||||| ||||| | Sbjct 68188371 TGGCTCAAGAAGCGAGGGCTCATGCCCGGGTTGACCTTCTCCAACGAGCTGATCTCGAGA 68188312 Query 102306 GACGAGGGACTCCAC 102320 ||||| || || ||| Sbjct 68188311 GACGAAGGCCTTCAC 68188297 >seq13 Length=83567108 Score = 111 bits (122), Expect = 2e-19 Identities = 249/372 (67%), Gaps = 4/372 (1%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||| |||| | ||| ||||| || || |||| ||||||||| || Sbjct 7106760 AAACCCATCCATCTCAGTCAGCAACTGATTAATCGTCTGCTCCCTCTCATCATTCCCT-- 7106703 Query 16034 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | ||| ||||| | | ||| | ||||| ||||||||||||||||| || || || Sbjct 7106702 CCTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCATCAATCTCATCAATAAAAACAATA 7106643 Query 16092 CATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151 || || || | ||| ||||| | ||||| || | ||| ||||||||| Sbjct 7106642 CAAGGCGCCTTAGCCTTAGCCTTCTCAAACAAATCCCTAACCCTAGAGGCACCCACACCA 7106583 Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCC 16211 || || | ||| ||||| | | || | || || ||| || || || || || Sbjct 7106582 ACGAAAAGCTCAACAAACTCAGACGCCGCGCAGGAGAAGAACGGCACTCCAGCCTCTCCA 7106523 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 || | |||| || | ||| ||||| || || || || |||| ||||||| ||| Sbjct 7106522 GCCACAGCTCTAGCTAAAAGCGTCTTCCCAGTCCCGGGGGGACCCACGAGGAGACACCCT 7106463 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 |||||||||||||| || ||| | ||||| | ||| | ||| || || | Sbjct 7106462 TTGGGAATCTTGGCGCCCAAGGCAGTGTACTTATCAGGATTCTTCAAAAAGTCGACGACT 7106403 Query 16332 TCTTCCAATTCA 16343 |||| ||| ||| Sbjct 7106402 TCTTGCAACTCA 7106391 >seq6 Length=38054609 Score = 111 bits (122), Expect = 2e-19 Identities = 505/792 (64%), Gaps = 23/792 (3%) Strand=Plus/Plus Query 101721 GAACCTCTCCTAGCCCCCACACTAAACAGATTTACTG--TGTTCCCCCTGAAGTATCCAC 101778 || || || || |||| || | | ||||||| ||| ||||||| | | || || | Sbjct 29819547 GAGCCGCTTCTCACCCCAACCCCAGACAGATT--CTGCATGTTCCCGATCCACTACCCGC 29819604 Query 101779 ACCTCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATTGGACTGCTGAAGAGGTAGATC 101838 | ||||||| | || |||||||| | | ||||| || ||||| || |||| Sbjct 29819605 AGATCTGGGAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAAGAAGTCGATC 29819664 Query 101839 TCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAAAATGAAAAGAAATTCATAAAAT 101898 |||| | || ||| ||| ||| ||| || || || | ||||| ||| Sbjct 29819665 TCTCCCAAGACACTCGCGACTGGGAGAATCTCAACGACGGAGAGCGCCACTTCATCAAAC 29819724 Query 101899 ACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACT 101958 || |||| || ||||| || | ||||| ||||| ||||| |||||| || | | Sbjct 29819725 ACGTCCTCGCCTTCTTCGCCGCATCCGACGGAATCGTTTTAGAGAATCTCG----CCTCC 29819780 Query 101959 TTGCTGATG----AGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCA-ATGTCA 102013 | | ||| | |||||| ||| || ||| | | ||||| | || || || | Sbjct 29819781 CGGTTCATGTCCGACGTGCAAGTCTCCGAGGCGCGTGCCTTCTACGGGTTCCAGATCGCG 29819840 Query 102014 TAATGAAATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGG 102073 | ||| | | || |||| ||||| || | |||| ||| || |||||| Sbjct 29819841 -ATTGAGAATATCCACTCAGAGATGTACAGCCTCCTGCTCGACACGTACATCAAGGATAA 29819899 Query 102074 TGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGC 102133 | |||| | | || ||||| || || |||| | || || | ||||| || Sbjct 29819900 TAAAGAGAGGGACCACCTCTTCCGCGCGATTGAAACCATACCTTGCGTCGCGAAGAAGGC 29819959 Query 102134 GGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGC 102193 | ||||| |||| |||| | || | || | | || || ||| | || | || Sbjct 29819960 CCAATGGGCCATGACGTGGATCGACGGA---TCTCAGACTTTCGCCGAGAGGATCGTGGC 29820016 Query 102194 ATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAA 102253 ||||| || || || || ||||||||||| || ||||||| | || | ||||| || Sbjct 29820017 GTTTGCTTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTTCTGCTCGATCTTCTGGCTGAA 29820076 Query 102254 GAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||||||| |||||||| || | ||||||||||||| | |||||||| ||||| || Sbjct 29820077 GAAGCGAGGGCTCATGCCTGGGTTAACCTTCTCCAACGAGTTGATCTCTCGAGACGAAGG 29820136 Query 102314 ACTCCACCAAGAGTTTGCGGTG---GAACTTTTCAAATTATTGCGTATTAAACCAACGAC 102370 || ||| || || || ||| || || | | ||||| | | || | ||| Sbjct 29820137 CCTTCACTGCGACTTCGC-GTGCCTGATCTAT--ACTCTATTGAGGACGAAGCTCACGGA 29820193 Query 102371 TGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGATTCATATTGGA 102430 ||| | | || |||||| || || || ||||| |||| || || | | || Sbjct 29820194 GGAGCGCGTGAAGTCGATTGTTTGCGACGCGGTGGAGATCGAGAGGGAGTTTGTGTGCGA 29820253 Query 102431 TGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATATATTGAGTA 102490 || ||||| ||||| | | || |||||| ||| |||| | |||||||||| Sbjct 29820254 CGCGCTTCCGTGCGCGTTGGTGGGGATGAATCGTGATCTGATGAGTCAGTATATTGAGTT 29820313 Query 102491 TGTATCTGATAG 102502 ||| | ||||| Sbjct 29820314 TGTGGCGGATAG 29820325 >seq14 Length=28343526 Score = 107 bits (118), Expect = 2e-18 Identities = 299/451 (66%), Gaps = 16/451 (4%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || ||||| || ||||| | ||| | || ||||| ||||| | | || ||||| Sbjct 17773188 CGGTCAAAACGGCCTGGTCTAAGCAAGGCAGAGTCAAGAATATCTGCTCTGTTGGTTGCA 17773129 Query 15945 GCGATGACAACAATACC--TGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 || | || | | ||| |||| | || |||||||||||||||| ||||| ||||| | Sbjct 17773128 GCAACTACGATGACACCAGTGTTACCTT--CAAAACCATCCATCTCCGTCAAGAGCTGAT 17773071 Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTC 16059 ||| || ||||| | ||||||||| || |||| || | | | |||| | | Sbjct 17773070 TAAGCGTCTGTTCTCTTTCATCATTACCT---CCACCAATTCCGGTTCCTCTTTGCCTAC 17773014 Query 16060 CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAA 16119 | || ||||| || ||||| | ||||| ||||| || ||||| || || | Sbjct 17773013 CAACAGCATCTATTTCATCCACAAAGACAATGCAGGGAGCGTTTTCCTTGGCCTTTTTGA 17772954 Query 16120 AGAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGC 16177 | ||||| || || |||| || || ||||| || |||||||| ||||| | | | Sbjct 17772953 AAAGATCACG--GACCCTTGAAGCACCAACACCGACGAACATCTCAACAAACTCAGAACC 17772896 Query 16178 GGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCT 16236 | | || | | ||| || ||| || |||||| |||||||| || | || || | Sbjct 17772895 TG-AGATGGAAAAGAAAGGTACACCAGCTTCACCAGCAATGGCCTTTGCCAAGAGGGTTT 17772837 Query 16237 TACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAA 16296 |||| ||||| || ||| | ||||| ||||| || ||| || ||| || Sbjct 17772836 TACCAGTACCAGGAGGACCAACAAGGAGAACACCTTTCGGGATCCGAGCACCAACCGCAG 17772777 Query 16297 AGTATCTCTCAGGTTGCTTAAGAAAATCCAC 16327 | | |||||||| | ||| ||||| ||||| Sbjct 17772776 TGAACCTCTCAGGCTTCTTCAGAAACTCCAC 17772746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620666778057120