Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq9 273 3e-68 seq14 150 2e-31 seq60 116 5e-21 seq28 109 7e-19 seq16 105 8e-18 seq11 105 8e-18 seq1 100 3e-16 seq390 86.0 8e-12 seq8 84.2 3e-11 seq3071 82.4 9e-11 >seq9 Length=62778564 Score = 273 bits (302), Expect = 3e-68 Identities = 437/623 (70%), Gaps = 7/623 (1%) Strand=Plus/Minus Query 181804 CAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCC 181863 |||| | || | || || ||||| |||||||| || || || || ||||| || ||||| Sbjct 56234949 CAATACAATCACATTCTCTGGTCCAATTGCTGTTTTTGTTTCAGTCTTTCTAATTTATCC 56234890 Query 181864 TCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTT 181923 || || ||||| ||||||||||| ||| ||||| ||||| ||||| || || || || Sbjct 56234889 ACTAGGTCAATCTGATTGGTTCTTTGTGCCTAGTTTTGGTGTAGCGGCTATATTTCGATT 56234830 Query 181924 CCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGT 181983 | | ||||| |||| || |||||||||||| | || ||| | || ||| ||||||| | Sbjct 56234829 CATCCTCTTTTTCCAAGGGTTTCATAATTGGGCACTGAATTCATTTCATTTGATGGGAAT 56234770 Query 181984 TGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCACGGTGTGACCGTGGAGAATAC 182043 ||| ||| | || || | || | | | || ||| | |||| || || || |||| Sbjct 56234769 TGCCGGTGTACTTGGCGCGGCTCTGTTATGCGCTATTGATGGTGCTACTGTAGA-AATAT 56234711 Query 182044 TCTGTATC--AAGACGGTGACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAA 182101 | | |||| || | ||||| ||||||| || || || | ||| ||||| Sbjct 56234710 TTTTTATCTGAAAATGGTGATGGTGCAAATAAATTATGTGCTTTTAACCCAATTCAAGCC 56234651 Query 182102 GAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCG 182161 |||||||| ||||||||||| || || |||||||| ||||| | ||||| || ||| Sbjct 56234650 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACGAATCTTTGGGGCTGCT 56234591 Query 182162 TTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGG 182221 ||| |||||| ||||| || ||||||||| | ||||| || || | ||| | || Sbjct 56234590 TTTTCCAATAAACATTGGTTACAATTCTTTATGTTATTTGTACCAGTAACTGGTTTAAGG 56234531 Query 182222 ACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCC 182281 | ||| | | | || | ||||| ||| | ||||| |||| |||| ||| | ||| Sbjct 56234530 ATGAGTGCTCTTGTAATAGTAGGTCTAGCTTTGAACCTATGTGCCTATGGCTTCATTTCC 56234471 Query 182282 CAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTC 182341 |||||||| | ||| | ||||| || || || || || ||||| || || || ||||| Sbjct 56234470 CAAGAAATTTGTGCAGCGGAAGATCCGGACTT-GAAACTTTCTATACTAAAAATATTCTT 56234412 Query 182342 TTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGAT---CAACCACATGAGAACTTT 182398 || || |||||| | || | ||| | || | ||| || || ||||| ||| || Sbjct 56234411 TTAAACGAAGGTATTCGCACTTGGATGGCGGCTCAGGATCAGCAGCCTCATGAAAACATT 56234352 Query 182399 GTGTTCCCTGAGGAAGTATTACC 182421 | ||| ||||||| || ||||| Sbjct 56234351 ATATTCACTGAGGAGGTTTTACC 56234329 Score = 118 bits (130), Expect = 1e-21 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968 || |||||||| || ||||| ||| | || || || || |||||||||||| | || Sbjct 18477106 CTCGACGCTGCGGAGGAAGCAGGGATCGACTTGCCTTACTCTTGCCGTGCCGGTTCTTGC 18477047 Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028 || |||||||| |||||| ||| | |||| || || ||||| || || |||||| Sbjct 18477046 TCGAGCTGTGCAGGTAAAGTTGTGTCTGGTTTTGTTGACCAGTCTGACCAGAGTTTCCTC 18476987 Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 |||||||| || || | ||||| || ||||| ||||||| ||||||||||| Sbjct 18476986 GATGATGACCAGATTGCTGCAGGGTTTGTTCTCACCTGTGCGGCTTATCCTAC 18476934 Score = 86.0 bits (94), Expect = 8e-12 Identities = 213/305 (70%), Gaps = 15/305 (5%) Strand=Plus/Plus Query 179853 TTCATCGCTGCTCCCCCT-GTGGACATCGATGGCATCCGTGAACCCGTCG-CTGGTTCAC 179910 ||||| |||||| || || || || || || | || ||||||| || ||||| | | Sbjct 10190728 TTCATTGCTGCTTCCTCTAGTAGATATTGAGTGTATT-GTGAACCTGTTTTCTGGT-CTC 10190785 Query 179911 TCATGTATGGT--AACAACATCATCTCTGGTGCAGTTGTTCCTTCT-TC-CAACGCAAT- 179965 | | || ||| ||||| || | || |||||| || || || || || || || || Sbjct 10190786 TTCTTTAAGGTGAAACAATATTAGTTCCGGTGCA-TTATTTCTACTGTCTCAGGGCTATG 10190844 Query 179966 TGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAG-TGGCTGTATAACG 180024 |||| | || || || |||||||| |||| ||||| |||| || ||||| || || Sbjct 10190845 TGGTTTGCATTTTTACGCCATCTGG-AAGCTGCATCCGTTGATGAAATGGCTATACAAAC 10190903 Query 180025 GTGGTC-CTTTCCAACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGT 180083 ||||| ||| |||| | || | ||||| | |||| | | || |||||| Sbjct 10190904 GTGGTTGCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGT 10190963 Query 180084 CGTGAGTGGGAACTTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTC 180142 ||||||||||||||| || || |||||||||| || ||||| ||| || |||||||| Sbjct 10190964 CGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTC 10191022 Query 180143 TGCTC 180147 |||| Sbjct 10191023 AGCTC 10191027 >seq14 Length=28343526 Score = 150 bits (166), Expect = 2e-31 Identities = 204/282 (72%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 180075 TACATGGGTCGTGAGTGGGAACTTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GT 180133 || |||| | |||||||||||||| || | ||||||| || || ||||| ||| || Sbjct 20844999 TATATGGATTGTGAGTGGGAACTTAGTTTCTGTCTGGGTATACGTCCTTGGAT-TGCTGT 20845057 Query 180134 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 180193 |||||||| | ||| || || | || || ||| ||| | ||| || | | ||| Sbjct 20845058 TGCATATTCAGATCCTGTTGCAACTGCTATTGGTGTTTTCTTGATCTGCCCAATTGATCA 20845117 Query 180194 AGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGT 180253 ||| || ||||| ||||| || || || ||||| || ||||||| ||| |||| Sbjct 20845118 AGGAAGTTTTTCTGATAGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGGTTGT 20845177 Query 180254 TTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGT 180313 |||||| | ||||||||||| || |||||||| || |||||| | || ||||| ||||| Sbjct 20845178 ATTCCAAACTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 20845237 Query 180314 CTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGT 180355 |||||||| || || || || ||||| |||| ||||| Sbjct 20845238 ATTCGGCGGCTCTCTTTTTAGTGCTATGCATAGTTCCCTGGT 20845279 Score = 114 bits (126), Expect = 2e-20 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968 || |||||||| || ||||| || | || || || || |||||||| ||| | || Sbjct 23727193 CTCGACGCTGCTGAGGAAGCCGGAATCGACTTGCCTTACTCTTGCCGTGCTGGTTCTTGC 23727252 Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028 ||||||||||| |||||| ||| | ||| | || || ||||| || || |||||| Sbjct 23727253 TCCAGCTGTGCAGGTAAAGTTGTGTCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTC 23727312 Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 |||||||| || || | | |||||||||||| || |||| ||||||||||| Sbjct 23727313 GATGATGACCAGATTGCTGAAGGATTCGTTCTCACTTGTGCGGCTTATCCTAC 23727365 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 171910 TGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGTT 171969 |||| || || || ||||| || ||||| || || || ||| | ||||||||||||| Sbjct 9340152 TGGATGCAGCCGAAGAAGCTGGAGTTGACTTGCCTTACTCTTGCAGAGCCGGTGCCTGTT 9340211 Query 171970 CCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTTG 172029 ||| ||| || ||||| | |||| ||| || || ||||| || || || |||| Sbjct 9340212 CCACCTGCGCCGGTAAGATCGAGAAAGGTCAAGTTGACCAGTCTGATGGTTCGTTTCTTG 9340271 Query 172030 ATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCT 172079 | |||||| | |||| ||| | || |||| ||||| ||||| ||| Sbjct 9340272 AGGATGATAACTTGGAGAAAGGTTATGTCTTGACTTGTGTGGCTTACCCT 9340321 >seq60 Length=523306 Score = 116 bits (128), Expect = 5e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 181654 ACTTTGGGGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTG 181713 ||| |||| ||||||||| || || ||||| || ||| ||||| || || | || Sbjct 21524 ACTGTGGGATCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAACTAGGCGGTATGTG 21583 Query 181714 GGCTTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGA 181773 ||||||||| || |||||| | || ||| | | || ||||||||| | ||||||| Sbjct 21584 GGCTTTTGTTGCTCTCCACTGTGCTTTCACATTAATAGGTTTTATGTTGCATTAATTTGA 21643 Query 181774 ACTTGCTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTG 181832 ||||||||| ||| || | | ||||| || ||||| |||| || | |||| |||| Sbjct 21644 ACTTGCTCGATCTGTTC-AATTGCGACCTTATAATGCAGTTGCATTCTTTGGTCTAATTG 21702 Query 181833 CTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGG 181868 ||| || || || || ||||| || |||||||||| Sbjct 21703 ATGTTTTTGTTTCCGTCTTTCTAATTTATCCTCTGG 21738 >seq28 Length=1539140 Score = 109 bits (120), Expect = 7e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968 || |||||||| || ||||| || | || || || || |||||||| ||| |||| Sbjct 841680 CTTGACGCTGCTGAGGAAGCCGGAATCGACTTGCCTTACTCTTGCCGTGCTGGTTCCTGC 841621 Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028 || |||||||| |||||| ||| | ||| | || || ||||| || || |||||| Sbjct 841620 TCGAGCTGTGCAGGTAAAGTTGTGTCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTC 841561 Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 |||||||| || || | | |||||||||||| || |||| ||||||| ||| Sbjct 841560 GATGATGACCAGATTGCGGAAGGATTCGTTCTCACTTGTGCGGCTTATCTTAC 841508 >seq16 Length=18736220 Score = 105 bits (116), Expect = 8e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968 || |||||||| || ||||| ||| | || || || || |||||||||||| | || Sbjct 7499801 CTCGACGCTGCTGAGGAAGCAGGGATCGACTTGCCTTACTCTTGCCGTGCCGGTTCTTGC 7499860 Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028 || ||||| || |||||| ||| | |||| |||| || ||||| || || |||||| Sbjct 7499861 TCGAGCTGCGCAGGTAAAGTTGTGTCTGGTTCGGTTGACCAGTCTGACCAGAGTTTCCTC 7499920 Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 |||||||| || || | | ||| || || || || |||| || |||||||| Sbjct 7499921 GATGATGACCAGATTGCTGAAGGGTTTGTCCTCACTTGTGCGGCGTATCCTAC 7499973 >seq11 Length=32467241 Score = 105 bits (116), Expect = 8e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968 || |||||||| || ||||| ||| | || || || || ||||| |||||| |||| Sbjct 7692637 CTCGACGCTGCGGAGGAAGCCGGGATCGACTTGCCTTACTCTTGCCGCGCCGGTTCCTGC 7692578 Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028 || |||||||| |||||| ||| | || | || || ||||| || || |||||| Sbjct 7692577 TCGAGCTGTGCGGGTAAAGTTGTGTCCGGATCTGTTGACCAGTCTGACCAGAGTTTCCTC 7692518 Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 |||||||| || || | | ||| || ||||| || |||| ||||||||||| Sbjct 7692517 GATGATGACCAGATTGCTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTAC 7692465 >seq1 Length=45320942 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968 || |||||||| || ||||| ||| | || || || || |||||||| ||| | || Sbjct 31077827 CTCGACGCTGCGGAGGAAGCCGGGATCGACTTGCCTTACTCTTGCCGTGCTGGTTCGTGC 31077886 Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028 || |||||||| || ||| ||| | ||| || || ||||| || || |||||| Sbjct 31077887 TCAAGCTGTGCCGGCAAAGTTGTGTCTGGATTTGTTGACCAGTCTGACCAGAGTTTCCTC 31077946 Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 |||||||| || || | ||||| || ||||| || |||| ||||||||||| Sbjct 31077947 GATGATGACCAGATTGCTGCAGGGTTTGTTCTCACTTGTGCGGCTTATCCTAC 31077999 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968 || |||||||| || ||||| ||| | || || || || |||||||| ||| | || Sbjct 31114848 CTCGACGCTGCGGAGGAAGCCGGGATCGACTTGCCTTACTCTTGCCGTGCTGGTTCGTGC 31114789 Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028 || |||||||| || ||| ||| | ||| || || ||||| || || |||||| Sbjct 31114788 TCAAGCTGTGCCGGCAAAGTTGTGTCTGGATTTGTTGACCAGTCTGACCAGAGTTTCCTC 31114729 Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 |||||||| || || | ||||| || ||||| || |||| ||||||||||| Sbjct 31114728 GATGATGACCAGATTGCTGCAGGGTTTGTTCTCACTTGTGCGGCTTATCCTAC 31114676 >seq390 Length=101491 Score = 86.0 bits (94), Expect = 8e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 181887 TTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTC 181946 ||||| | ||||| ||||| ||||| || || || ||| | | ||| |||| | |||| Sbjct 2364 TTGCGTCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCACTTTTTCCAACGGTTTC 2423 Query 181947 ATAATTGGACGCTCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGG 181998 |||||||||| | || || || ||||||||||| || |||||| | ||||| Sbjct 2424 ATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCTGGTGTACTGGG 2475 Score = 84.2 bits (92), Expect = 3e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 181715 GCTTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAA 181774 |||||||| || ||||| || || ||||| | || ||||||||| | | ||||||||| Sbjct 2249 GCTTTTGTTGCTCTCCATGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAA 2308 Query 181775 CTTGCTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGC 181833 |||||||| ||| || | | ||||| || ||||| || || || || ||||| ||||| Sbjct 2309 CTTGCTCGATCTGTTC-AATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGC 2367 >seq8 Length=29345952 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/125 (75%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 180225 ATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCAC 180284 || ||||| || ||||||| ||| |||| ||||| || ||||||||||| || |||||| Sbjct 6844686 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 6844745 Query 180285 CCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCAC 180344 | ||| ||| | || ||||| ||||| |||||||| || || || || ||||| Sbjct 6844746 CATTTC--AATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 6844803 Query 180345 GGTTC 180349 |||| Sbjct 6844804 AGTTC 6844808 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 180585 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAAC 180644 ||||| || |||||||| |||||||| || | ||||| ||||||| ||||| | || Sbjct 10479929 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTTTTAAT 10479870 Query 180645 ACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATG 180692 |||||||| || | | ||||| ||| || ||||||||||||||| Sbjct 10479869 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATG 10479822 >seq3071 Length=6037 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 180585 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAAC 180644 ||||| || |||||||| |||||||| || | ||||| ||||||| ||||| | || Sbjct 1741 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTTTTAAT 1682 Query 180645 ACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATG 180692 |||||||| || | | ||||| ||| || ||||||||||||||| Sbjct 1681 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATG 1634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610322438409840