Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6 143 2e-29 seq13 120 2e-22 seq9 107 1e-18 seq17 105 5e-18 seq15 105 5e-18 seq5 105 5e-18 seq18 104 2e-17 seq12 104 2e-17 seq3614 91.5 1e-13 >seq6 Length=38054609 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| ||||| ||||| || || || |||||| ||||| ||||| |||| | Sbjct 21965386 CCTCCACGTAGACGCAAGACCAAGTGGAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCT 21965327 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || ||||||||||| |||||||| |||| | ||| || |||| ||| Sbjct 21965326 AGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGGGGG 21965267 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| || ||| | | | || || || ||||||| Sbjct 21965266 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCCACC 21965207 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| |||||||| || ||||||||||| || |||||||| ||||| Sbjct 21965206 TCCAAAGTAATCGTCTTCCCCGTCAAAGTCTTGACAAAAATTTGCAT 21965160 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || | ||| ||||| |||| || ||||| ||| || || ||||||||||||| Sbjct 21964931 GCCTCCACGTAGACGCAAGACCAGGTGGAGCGTAGACTCCTTCTGGATATTGTAATCAGC 21964872 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | | |||| ||||||||||| ||||| || || || | ||| ||||| | || Sbjct 21964871 CAAGGTCCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGG 21964812 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||| |||||||| |||||| ||| || | | | || || ||||| Sbjct 21964811 AATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCAC 21964752 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| | || || || ||||| || | |||||| ||||| ||||||||| Sbjct 21964751 CTCAAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCATC 21964703 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || |||||| ||| || || || ||||| || | || | ||| | || || Sbjct 21965824 ACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGACCATCCTCG 21965765 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || || ||||| || |||| || | ||| |||||||| Sbjct 21965764 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGG 21965705 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | || || || ||||||||| | ||| ||||| || Sbjct 21965704 ATCTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACCTCAAGCGTGATCGTCTTG 21965645 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || || ||||||||||| Sbjct 21965644 CCGGTCAATGTCTTAACGAAAATCTGCAT 21965616 >seq13 Length=83567108 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || | ||| ||||| ||||| || || || ||| || ||||| ||||| |||| Sbjct 62907381 GCCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGC 62907322 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| ||| | || || | |||||| |||||||| |||| | ||| || |||| || Sbjct 62907321 AAGAGTTCTTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGAGG 62907262 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||||| ||||| |||||| ||| ||| | | | || || |||||| Sbjct 62907261 AATACCCTCTTTGTCTTGGATCTTTGCTTTGACATTGTCAATGGTGTCGGAGCTCTCCAC 62907202 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||| ||||| || ||||||||||| || || ||||| ||||||||| Sbjct 62907201 CTCCAAAGTAATAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCATC 62907153 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || ||||| |||||| ||||| |||||||||| || ||| Sbjct 62924332 AGACGCAAGACCAAGTGAAGCGTAGACTCTTTCTGAATGTTGTAATCAGCCAGTGTTCTG 62924273 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| || |||| ||| || || | |||| ||| ||| Sbjct 62924272 CCGTCCTCTAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCTGGAGGAATGCCTTCC 62924213 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | || ||||| ||||||||||| || Sbjct 62924212 TTGTCTTGGATCTTTGCCTTGACATTGTCTATAGTGTCTGAACTCTCCACCTCCAGAGTG 62924153 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||| || || || ||||||||||| Sbjct 62924152 ATGGTCTTCCCGGTCAGTGTCTTAACGAAAATCTGCAT 62924115 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || || ||||| || || || || |||||||| ||||| |||| Sbjct 62924113 CCCCCACGTAGACGTAAGACCAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCAGCA 62924054 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || || | ||||| || ||||| |||| | ||| || || | ||| Sbjct 62924053 AGAGTACGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGA 62923994 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||| || |||||| ||| ||| | | | ||||| ||||||| Sbjct 62923993 ATACCCTCCTTATCCTGAATCTTCGCTTTAACATTGTCGATGGTATCTGAACTCTCCACC 62923934 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 62923933 TCCAAAGTAATGGTTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 62923887 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | |||| || ||||| ||| || || || |||||||| | Sbjct 48378064 CCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 48378123 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | | |||| |||| |||||| ||||| || ||||||||||| ||||||| || Sbjct 48378124 AGTGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGGG 48378183 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| |||||||| ||||| ||| ||| | | | ||||| | || ||| Sbjct 48378184 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATCGTGTCTGATGATTCGACC 48378243 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || ||||| || ||||| | ||||| ||||| |||||||| Sbjct 48378244 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 48378290 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || | ||| ||||| ||||| || || || ||| || || || |||||||||| Sbjct 39908410 GCCACCACGTAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGC 39908351 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || || | ||||| |||||||| |||| | ||| || |||| || Sbjct 39908350 AAGAGTACGTCCATCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 39908291 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | ||||| ||||| ||||| ||| || | | | || || |||||| Sbjct 39908290 GATACCCTCTTTGTCTTGGATCTTGGCTTTGACGTTGTCAATGGTATCGGAGCTCTCCAC 39908231 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || ||||| ||||| || || |||||||| ||||| Sbjct 39908230 CTCCAAAGTGATAGTCTTTCCTGTCAAGGTCTTCACAAAAATTTGCAT 39908183 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||| ||||| |||| ||| ||| | || ||||||||||| |||||||| Sbjct 39908146 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTGCTTTCCGGCAAA 39908087 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| | ||| || |||| || | |||||||| || ||||||| || || Sbjct 39908086 GATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTATCCTGAATCTTTGCCTTGACGTT 39908027 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || ||||||||||| || || || ||||| ||||| || || || Sbjct 39908026 GTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTGATAGTCTTTCCGGTCAATGTCTTGAC 39907967 Query 48755 AAAAATCTGCAT 48766 ||| || ||||| Sbjct 39907966 AAAGATTTGCAT 39907955 >seq9 Length=62778564 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| ||||| ||||| || || || ||| || || ||||||||||||| Sbjct 30454743 CCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCG 30454684 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||| |||| || | ||||||||| ||||| |||| ||||| || || | ||| Sbjct 30454683 AGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGA 30454624 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| ||| || | | | || || ||||||| Sbjct 30454623 ATCCCCTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCACC 30454564 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| ||||| ||||| || | |||||| || || |||||||| Sbjct 30454563 TCGAGCGTGATCGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCAT 30454517 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| ||||| ||| || || || ||||| || | || | || |||| |||| ||| Sbjct 52511138 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCTTCCAGCTG 52511079 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| ||||| || ||||||||||| || || | || | ||| |||||||| ||||| Sbjct 52511078 CTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTT 52511019 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || ||| | | | || || | ||| ||||| | || || ||||||||||| Sbjct 52511018 GGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTTCCCGT 52510959 Query 48743 CAAAGTTTTTACAAAAATCTGCATC 48767 | ||||| ||||| ||||||||| Sbjct 52510958 AAGGGTTTTCACAAAGATCTGCATC 52510934 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 |||||| || ||| || ||||| || || |||| ||| ||| | || || | ||| Sbjct 30497132 ATGTAGAGTAGACTCCTTCTGAATGTTATAGTCAGCGAGAGTTCTCCCATCCTCGAGCTG 30497073 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| |||||||| |||| | ||| || || | |||| ||||||||||| ||||| Sbjct 30497072 CTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCTTGGATCTT 30497013 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| || | | || ||||| ||||||||||| ||||| || ||||| || Sbjct 30497012 AGCTTTGACGTTGTCAATAGTATCTGAACTCTCCACCTCCAAAGTAATAGTCTTTCCGGT 30496953 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || || ||||| Sbjct 30496952 TAATGTCTTAACGAAGATTTGCAT 30496929 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| |||||||| ||||| |||| || | || | || || | ||||||||||||||| Sbjct 30496892 CTCCTTTTGAATGTTGTAGTCAGCGAGGGTACGCCCATCTTCAAGCTGCTTACCGGCAAA 30496833 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| || || ||||||| |||| || || || || |||||| ||| || Sbjct 30496832 GATCAATCTTTGCTGATCCGGAGGAATACCTTCTTTATCCTGAATCTTGGCTTTAACGTT 30496773 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || ||||||||||| || ||||| || || |||| || || || Sbjct 30496772 GTCGATGGTATCAGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCTGTCAGTGTCTTAAC 30496713 Query 48755 AAAAATCTGCATC 48767 || ||||||||| Sbjct 30496712 GAAGATCTGCATC 30496700 >seq17 Length=44223734 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||||||| || ||| ||| || ||||| ||||| |||| | | ||| Sbjct 34300672 AGACGCAACACCAAATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGA 34300613 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| |||||||| |||| ||||| || |||| |||| || ||| Sbjct 34300612 CCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGAATACCTTCC 34300553 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| || | | | || || ||| ||||| | || Sbjct 34300552 TTGTCTTGGATCTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCGACCTCTAGAGTG 34300493 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| |||||||||| || || ||||| |||||||| Sbjct 34300492 ATCGTCTTTCCCGTCAGTGTCTTGACAAAGATCTGCAT 34300455 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || || || ||| || || || ||||| |||| ||| ||| | Sbjct 34300444 AGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTA 34300385 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| ||||| || |||| | ||| ||||||| ||||| ||| ||| Sbjct 34300384 CCGTCTTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGGGAATGCCTTCC 34300325 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||||| ||| || | | | || || |||||||| | || Sbjct 34300324 TTATCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTG 34300265 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||| || || || | ||| ||||| || ||||||||| Sbjct 34300264 ATCGTCTTCCCGGTGAGAGTCTTTACGAAGATCTGCATC 34300226 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||| ||| || || ||| || || || ||||| |||| |||| ||| | Sbjct 38928085 AGACGCAACACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTTCTA 38928026 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| |||||||| |||| | ||| ||||| | || | |||||| Sbjct 38928025 CCATCCTCGAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGATCAGGTGGGATTCCCTCC 38927966 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | | || || ||||||||| | || Sbjct 38927965 TTGTCTTGGATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACCTCTAGTGTG 38927906 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| ||||| || | || || ||||| |||||||| Sbjct 38927905 ATCGTCTTTCCGGTGAGTGTCTTGACAAAGATCTGCAT 38927868 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || || || ||| |||||||| ||||| || | || | ||| Sbjct 34300900 AGACGCAACACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGA 34300841 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || || || || || ||||| || || | || | ||| ||| Sbjct 34300840 CCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCC 34300781 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | | || || ||||||||||| || Sbjct 34300780 TTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTG 34300721 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || ||||| |||||||| Sbjct 34300720 ATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 34300683 >seq15 Length=50573455 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || |||||| ||| || || |||||||| |||| | | ||| Sbjct 31711014 AGACGCAACACCAAGTGAAGCGTGGACTCCTTCTGGATATTGTAGTCAGCCAAGGTACGA 31711073 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||||||||| ||||| |||| || ||| || |||| || | |||||| Sbjct 31711074 CCGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCCGGTGGGATACCCTCC 31711133 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || ||| ||||| | || Sbjct 31711134 TTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACCTCTAGAGTG 31711193 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| ||||| || || ||||| |||||||| Sbjct 31711194 ATTGTTTTTCCTGTCAAGGTCTTGACAAAGATCTGCAT 31711231 >seq5 Length=38841276 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || | ||| ||||| ||||| || || || |||||| ||||| |||||||| | Sbjct 24217591 GCCTCCACGTAGACGCAAGACCAAGTGAAGAGTTGACTCTTTCTGAATGTTGTAATCCGC 24217532 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | ||| | || ||||||||||| |||||||| |||| | ||| || |||| || Sbjct 24217531 CAAGGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 24217472 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||| || ||||| || ||| | | || || || ||| || Sbjct 24217471 GATTCCCTCCTTATCCTGGATCTTGGCCTTAACATTGTCAATAGTGTCAGAGCTCTCAAC 24217412 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || ||||| ||||| || || ||||| |||||||| Sbjct 24217411 CTCCAAAGTGATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 24217364 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 |||||| || ||| || || || |||||||| | ||| ||| |||| || | ||| Sbjct 24921995 ATGTAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCTCCCGTCCTCGAGCTG 24921936 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| ||||| || || || | ||| ||||||| |||| ||||||||||| |||||| Sbjct 24921935 CTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTT 24921876 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | | || || |||||||| | || ||||| |||||||| Sbjct 24921875 GGCTTTAACATTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCCGT 24921816 Query 48743 CAAAGTTTTTACAAAAATCTGCATC 48767 | || || || || ||||||||| Sbjct 24921815 GAGTGTCTTAACGAAGATCTGCATC 24921791 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || ||||| | ||| || || ||| || ||||| ||||| || | | | ||| Sbjct 24922237 AGACGTAACACGAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGCCAATGTACGA 24922178 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| |||||||| |||| ||||| || || | || | |||||| Sbjct 24922177 CCATCCTCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGCGGGATTCCCTCC 24922118 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | | || || ||||||||| | || Sbjct 24922117 TTGTCCTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGTGTG 24922058 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| |||||||| || || || ||||| |||||||| Sbjct 24922057 ATCGTCTTTCCCGTTAAGGTCTTGACAAAGATCTGCAT 24922020 >seq18 Length=77673080 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| |||||| ||| |||||||| |||||||| | ||| | || Sbjct 62463333 AGACGAAGCACAAGATGGAGCGTGGACTCCTTTTGAATGTTGTAATCCGCAAGAGTGCGT 62463274 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 |||| || | |||||| || || || || |||| ||| || || | ||||| | || || Sbjct 62463273 CCGTCTTCGAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATC-CCTTC 62463215 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| ||||||| || ||| | | | | ||||| ||| ||||||| || Sbjct 62463214 CTTGTCCTGAATCTTTGCCTTGACATTATCGATGGTGTCTGAGCTCTCAACCTCCAAAGT 62463155 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | || || |||||||||||||| Sbjct 62463154 GATGGTTTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 62463116 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||||||| || ||| ||| |||||||| ||||| |||| || | ||| Sbjct 47092673 AGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCTAAGGTGCGA 47092614 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || || || || || || || ||||||| || | ||| ||| Sbjct 47092613 CCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGGGATGCCTTCC 47092554 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || || ||||||||| | ||| Sbjct 47092553 TTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTT 47092494 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || || || |||||||| Sbjct 47092493 ATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47092456 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||||||| || ||| ||| |||||||| ||||| |||| || | ||| Sbjct 47106812 AGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCTAAGGTGCGA 47106871 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || || || || || || || ||||||| || | ||| ||| Sbjct 47106872 CCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGGGATGCCTTCC 47106931 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || || ||||||||| | ||| Sbjct 47106932 TTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTT 47106991 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || || || |||||||| Sbjct 47106992 ATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47107029 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||||||| || ||| ||| |||||||| ||||| |||| || | ||| Sbjct 47110272 AGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCTAAGGTGCGA 47110331 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || || || || || || || ||||||| || | ||| ||| Sbjct 47110332 CCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCCGGAGGGATGCCTTCC 47110391 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || || ||||||||| | ||| Sbjct 47110392 TTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTT 47110451 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || || || |||||||| Sbjct 47110452 ATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 47110489 >seq12 Length=60369500 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| ||||| ||||| || || || ||| || || || |||||||||| Sbjct 48264998 CCTCCACGTAGTCGCAAGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCA 48264939 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || || | ||||| || || || |||| | ||| || |||| |||| Sbjct 48264938 AGAGTACGTCCATCCTCGAGTTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGGGGA 48264879 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| ||||| ||||| ||| ||| | | | || || ||| ||| Sbjct 48264878 ATACCCTCTTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCGGAGCTCTCAACC 48264819 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || ||||||||||| ||||| |||||||||||||| Sbjct 48264818 TCCAAAGTGATAGTCTTTCCCGTCAATGTTTTAACAAAAATCTGCAT 48264772 >seq3614 Length=4742 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||||||| || ||| ||| |||||||| ||||| |||| || | ||| Sbjct 409 AGACGCAACACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCTAAGGTGCGA 468 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 ||| || | |||||| || || || || || | || ||||||| || | ||| ||| Sbjct 469 CAGTCTTCAAGCTGCTTGCCAGCGAAGATGAGAAGTTGCTGATCCGGAGGGATGCCTTCC 528 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || || ||||||||| | ||| Sbjct 529 TTGTCCTGGATCTTAGCCTTAACGTTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTT 588 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || || || |||||||| Sbjct 589 ATAGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCAT 626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380892352469958