Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq9 224 1e-53 seq14 185 1e-41 seq16 127 3e-24 seq11 122 1e-22 seq60 113 6e-20 seq28 113 6e-20 seq8 111 2e-19 seq390 100 4e-16 seq17 89.7 7e-13 >seq9 Length=62778564 Score = 224 bits (248), Expect = 1e-53 Identities = 381/548 (70%), Gaps = 8/548 (1%) Strand=Plus/Plus Query 23480 GTTCAACAAAATATTTTTCGTGTAGAAGGTCTCA--TACGAACCATCTTCAGCAGCACGA 23537 ||| || | ||||||||| || ||||| || ||| | || | ||||| || |||| | Sbjct 56234406 GTTTAAAAGAATATTTTTAGTATAGAAAGTTTCAAGTCCGGA---TCTTCCGCTGCACAA 56234462 Query 23538 ATCTCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGCAAGCCCAATGATGCCAATA 23597 || ||||| | || |||| |||| || || | ||| || || | || ||| | Sbjct 56234463 ATTTCTTGGGAAATGAAGCCATAGGCACATAGGTTCAAAGCTAGACCTACTATTACAAGA 56234522 Query 23598 GAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTA 23657 | | | || | ||| | || || ||||| ||||||||||| || |||||| | ||| Sbjct 56234523 GCACTCATCCTTAAACCAGTTACTGGTACAAATAACATAAAGAATTGTAACCAATGTTTA 56234582 Query 23658 TTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGATTTGCTGTAACCATCGAATAG 23717 ||| ||| ||| |||| |||||| |||||||||| || || || || ||||| ||||| Sbjct 56234583 TTGGAAAAAGCAGCCCCAAAGATTCGTGACCAAAAGCGGTTAGCGGTGACCATTGAATAA 56234642 Query 23718 GTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCA 23777 || || || | ||| | | | || || || | ||||| || |||| |||| Sbjct 56234643 GTTTCTTCGGCTTGAATTGGGTTAAAAGCACATAATTTATTTGCACCATCACCATTTTCA 56234702 Query 23778 --TACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTA 23835 || | |||| || |||||| | |||| |||||| | | || || | || |||| Sbjct 56234703 GATAAAAAATATT-TCTACAGTAGCACCATCAATAGCGCATAACAGAGCCGCGCCAAGTA 56234761 Query 23836 TACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGA 23895 ||| |||| |||||||| ||| || | || || | ||| |||||||| || |||| | Sbjct 56234762 CACCGGCAATTCCCATCAAATGAAATGAATTCAGTGCCCAATTATGAAACCCTTGGAAAA 56234821 Query 23896 AGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACT 23955 |||| | ||| | || || ||||| ||||| ||||| ||| ||||||||||| || | Sbjct 56234822 AGAGGATGAATCGAAATATAGCCGCTACACCAAAACTAGGCACAAAGAACCAATCAGATT 56234881 Query 23956 GTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAA 24015 | || | ||||| || || || || || || || |||||||| |||||||| || | | Sbjct 56234882 GACCTAGTGGATAAATTAGAAAGACTGAAACAAAAACAGCAATTGGACCAGAGAATGTGA 56234941 Query 24016 TCGCATTG 24023 | | |||| Sbjct 56234942 TTGTATTG 56234949 Score = 122 bits (134), Expect = 1e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692 || ||||| ||||||||||||| ||||| || |||| ||||| ||||||||| | || Sbjct 18476913 GTCTCAATGGTAACATCAGAAGTAGGATAAGCCGCACAGGTGAGAACAAACCCTGCAGCA 18476972 Query 32693 ATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTACCAGATACAATCTTA 32752 || || |||||||| | ||| ||| ||| ||||| || |||||| |||| ||| Sbjct 18476973 ATCTGGTCATCATCGAGGAAACTCTGGTCAGACTGGTCAACAAAACCAGACACAACTTTA 18477032 Query 32753 CCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTCC 32812 |||||||| || || | ||| ||||| |||||||| || || | ||| ||||| Sbjct 18477033 CCTGCACAGCTCGAGCAAGAACCGGCACGGCAAGAGTAAGGCAAGTCGATCCCTGCTTCC 18477092 Query 32813 TCTGCTGCATCAAGGATGTA 32832 || || || || |||| ||| Sbjct 18477093 TCCGCAGCGTCGAGGACGTA 18477112 Score = 89.7 bits (98), Expect = 7e-13 Identities = 259/382 (68%), Gaps = 15/382 (4%) Strand=Plus/Minus Query 27317 GAGCAGAATATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACT 27376 |||| |||||||| ||| ||||| ||||||||||| | ||| | |||||||||| Sbjct 10191027 GAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACT 10190968 Query 27377 CACGTCCCATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAG-GA 27435 |||| ||||||||| | | || | | ||||| | || | |||| ||| | Sbjct 10190967 CACGACCCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGCAA 10190908 Query 27436 CCACCGTTATACAACCA-CTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAG 27494 |||| || || | ||| ||||| | ||||| |||| |||||| | ||| || || | Sbjct 10190907 CCACGTTTGTATAGCCATTTCATCAACGGATGCAGCTT-CCAGATGGCGTAAAAATGCAA 10190849 Query 27495 ACC-GATTG-CATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTT--GCCATACA 27550 ||| || | | | || | | | | |||||| ||| | || ||||| || || | Sbjct 10190848 ACCACATAGCCCTGAGACAGTAGAAATAATGCACCGGAACTAATATTGTTTCACCTTAAA 10190789 Query 27551 TAAGTGAACCAG-CAACGGGTTCACGAATACCGTCAATATCGACGGGTGG-TGCTGCGAT 27608 ||| | ||||| ||| ||||||| ||||| |||||||| || | || || || || Sbjct 10190788 GAAGAG-ACCAGAAAACAGGTTCAC-AATACACTCAATATCTACTAGAGGAAGCAGCAAT 10190731 Query 27609 GAATGCGACAATGAAGCAGACAGTTGCTG-CTAACAGTGTTGGGATCATCAGTACACCGA 27667 |||| | || || | || ||| || | | | | || |||||||||| ||||| | Sbjct 10190730 GAATCTAATAA--AAACGGA-AGTAGCGGTCAATTAAGGTAGGGATCATCAAAACACCAA 10190674 Query 27668 ACCAACCAACATACAAACGGTT 27689 |||| ||||| |||||||| Sbjct 10190673 ACCATCCAACTGTAAAACGGTT 10190652 >seq14 Length=28343526 Score = 185 bits (204), Expect = 1e-41 Identities = 205/271 (76%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 27121 TGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGG 27180 ||||||||| |||||||| || |||||||| ||||| ||||| | |||||| || ||| Sbjct 20845267 TGCATAGCACTAAAAAGAGAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGG 20845208 Query 27181 TGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATA 27240 |||||||| || ||||| || | |||||||||| ||| |||| |||||||||||||| Sbjct 20845207 TGCATAAGAATGTTGTGCTCAGTTTGGAATACAACCATAAAGTTGAAAGTACCAGAGATT 20845148 Query 27241 CCAAGAGGCATAGCATCGGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACTGCA 27300 || ||||||||| ||| || ||| |||||| | | || ||| | ||| || || Sbjct 20845147 CCTAGAGGCATACTATCAGAAAAACTTCCTTGATCAATTGGGCAGATCAAGAAAACACCA 20845088 Query 27301 CTCGCAGCAGCGACTGGAGCAGAATATGCTACACAGATCCATGGACGCATACCTAAAC-G 27359 | |||| || || ||| | |||||||| ||| ||||| ||||| ||||| | || | Sbjct 20845087 ATAGCAGTTGCAACAGGATCTGAATATGCAACAGCAATCCAAGGACGTATACCCAGACAG 20845028 Query 27360 ATATGAGAGTTCCCACTCACGTCCCATATAA 27390 | | | ||||||||||||| |||||||| Sbjct 20845027 AAACTA-AGTTCCCACTCACAATCCATATAA 20844998 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692 || ||||| ||||||||||||| ||||| || |||||||||| || || ||||| || Sbjct 23727386 GTCTCAATGGTAACATCAGAAGTAGGATAAGCCGCACAAGTGAGAACGAATCCTTCAGCA 23727327 Query 32693 ATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTACCAGATACAATCTTA 32752 || || |||||||| | ||| ||| ||| ||||| || | ||||| |||| ||| Sbjct 23727326 ATCTGGTCATCATCGAGGAAACTCTGGTCAGACTGGTCAACAGATCCAGACACAACTTTA 23727267 Query 32753 CCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTCC 32812 |||||||| || || | ||| ||||| |||||||| || || | || ||||| Sbjct 23727266 CCTGCACAGCTGGAGCAAGAACCAGCACGGCAAGAGTAAGGCAAGTCGATTCCGGCTTCC 23727207 Query 32813 TCTGCTGCATCAAGGATGTA 32832 || || || || |||| ||| Sbjct 23727206 TCAGCAGCGTCGAGGACGTA 23727187 Score = 89.7 bits (98), Expect = 7e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 32657 GGATATGCAACACAAGTGAGCACA-AACCCTTCTTCAATTTGATCATCATCCAAGAACGA 32715 || || || |||||||| | ||| |||| |||| ||| || |||||| || | ||||| Sbjct 9340320 GGGTAAGCCACACAAGTCAAGACATAACCTTTCTCCAAGTT-ATCATCCTCAAGAAACGA 9340262 Query 32716 CTGATCACTTTGGTCTACTGTACCAGATACAATCTTACCTGCACAAGATGAACAGGCACC 32775 |||| ||||| ||| ||| | |||||||| || || | ||||||||||| Sbjct 9340261 ACCATCAGACTGGTCAACTTGACCTTTCTCGATCTTACCGGCGCAGGTGGAACAGGCACC 9340202 Query 32776 TGCACGACAAGAGTAGTTTAAATCAACCCCACCTTCCTCTGCTGCATCAAGGATGTATTG 32835 || | |||||||| || ||||| ||| |||| || |||||||| | |||||||| Sbjct 9340201 GGCTCTGCAAGAGTAAGGCAAGTCAACTCCAGCTTCTTCGGCTGCATCCAATATGTATTG 9340142 Query 32836 ATCATC 32841 || || Sbjct 9340141 GTCGTC 9340136 >seq16 Length=18736220 Score = 127 bits (140), Expect = 3e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 32643 TAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCAATTTGATCAT 32702 ||||||||||||| ||||| || |||||||||| ||||||||||| |||| || |||| Sbjct 7499984 TAACATCAGAAGTAGGATACGCCGCACAAGTGAGGACAAACCCTTCAGCAATCTGGTCAT 7499925 Query 32703 CATCCAAGAACGACTGATCACTTTGGTCTACTGTACCAGATACAATCTTACCTGCACAAG 32762 |||| | ||| ||| ||| ||||| || | |||||| |||| |||||||| || Sbjct 7499924 CATCGAGGAAACTCTGGTCAGACTGGTCAACCGAACCAGACACAACTTTACCTGCGCAGC 7499865 Query 32763 ATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTCCTCTGCTGCAT 32822 || || | ||| ||||| |||||||| || || | ||| ||||||| || || | Sbjct 7499864 TCGAGCAAGAACCGGCACGGCAAGAGTAAGGCAAGTCGATCCCTGCTTCCTCAGCAGCGT 7499805 Query 32823 CAAGGATGTA 32832 | |||| ||| Sbjct 7499804 CGAGGACGTA 7499795 Score = 84.2 bits (92), Expect = 3e-11 Identities = 180/267 (67%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 46980 ATCATCGCGGGAAGAACATGCGAACTTTCTAGGTCAAAATTATCATTTGGACCATATAGG 47039 |||| || ||||| ||||| ||| | || ||| |||||||| || |||| || || Sbjct 15401743 ATCAGAGCAGGAAGCACATGAGAATTCTCCGGGTGGAAATTATCGTTCTGACCGTAGAGA 15401802 Query 47040 TTTGTAGGCATCAAAGAGATAGCATTAAATCCA-TACTGCTGAT---GGTATGCCTGACA 47095 || || ||||| ||||| |||| ||| | |||||| |||| |||||||| Sbjct 15401803 TTCGTCGGCATACCGGAGATCGCATC----CCACTGATGCTGAACCCGGTACGCCTGACA 15401858 Query 47096 CATCTTGATACCAGCAATCTTTGCAATAGCATAAGAATCATTACTAGGTTCAAGAGGACC 47155 ||||||||| || || ||||| || || || || | || || | || || || || || Sbjct 15401859 CATCTTGATCCCCGCGATCTTGGCGATCGCGTACCACTCGTTGGTGGGCTCGAGTGGGCC 15401918 Query 47156 ACTCATTAGATATTCTTCCCTAATAGGTTGTTCACATAATTTTGGATAAATGCAGGAAGA 47215 | | ||| | ||| || || || | |||||||| || |||||||| || Sbjct 15401919 TGTGAGGAGAGCTGATTCGGGTATGGGCTGAGGAGCGAATTTTGGGTAGATGCAGGAGGA 15401978 Query 47216 ACCAAGAAATAAAAGTTTCTTAACACC 47242 || || || | |||||||| || || Sbjct 15401979 GCCGAGGAAGAGGAGTTTCTTGACGCC 15402005 >seq11 Length=32467241 Score = 122 bits (134), Expect = 1e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692 || ||||| ||||||||||||| ||||| || |||||||||| ||||||||||| || Sbjct 7692444 GTCTCAATGGTAACATCAGAAGTAGGATAAGCCGCACAAGTGAGAACAAACCCTTCAGCA 7692503 Query 32693 ATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTACCAGATACAATCTTA 32752 || || |||||||| | ||| ||| ||| ||||| || | || || |||| ||| Sbjct 7692504 ATCTGGTCATCATCGAGGAAACTCTGGTCAGACTGGTCAACAGATCCGGACACAACTTTA 7692563 Query 32753 CCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTCC 32812 || ||||| || |||| ||| || || |||||||| || || | ||| ||||| Sbjct 7692564 CCCGCACAGCTCGAGCAGGAACCGGCGCGGCAAGAGTAAGGCAAGTCGATCCCGGCTTCC 7692623 Query 32813 TCTGCTGCATCAAGGATGTA 32832 || || || || |||| ||| Sbjct 7692624 TCCGCAGCGTCGAGGACGTA 7692643 >seq60 Length=523306 Score = 113 bits (124), Expect = 6e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 23959 CCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCG 24018 ||| |||||| || || || || || || || ||| |||| ||||| | || |||| | Sbjct 21738 CCAGAGGATAAATTAGAAAGACGGAAACAAAAACATCAATTAGACCAAAGAATGCAACTG 21679 Query 24019 CATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCT 24077 |||| || || || | | || ||| || || |||||||| | | | |||||||||||| Sbjct 21678 CATTATAAGGTCGCAATTGAAC-AGATCGAGCAAGTTCAAATTAATGCAACATAAAACCT 21620 Query 24078 ATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCAC 24137 || | || || |||| ||||||||||||||| | ||| | || || ||||| ||| Sbjct 21619 ATTAATGTGAAAGCACAGTGGAGAGCAACAAAAGCCCACATACCGCCTAGTTGACACCAA 21560 Query 24138 CGTTGAAAGTCCCCTTGAGACTCAGGACCCCAAAGT 24173 || ||| || ||||| | |||||| |||| ||| Sbjct 21559 CGAGTAAAATCTCCTTGTGCTTCAGGATCCCACAGT 21524 >seq28 Length=1539140 Score = 113 bits (124), Expect = 6e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 32633 GTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACAAACCCTTCTTCA 32692 || ||||| ||||||| |||| |||| || |||||||||| || || ||||| || Sbjct 841487 GTCTCAATGGTAACATCGAAAGTAAGATAAGCCGCACAAGTGAGAACGAATCCTTCCGCA 841546 Query 32693 ATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTACCAGATACAATCTTA 32752 || || |||||||| | ||| ||| ||| ||||| || | ||||| |||| ||| Sbjct 841547 ATCTGGTCATCATCGAGGAAACTCTGGTCAGACTGGTCAACAGATCCAGACACAACTTTA 841606 Query 32753 CCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCAACCCCACCTTCC 32812 |||||||| || |||| ||| ||||| |||||||| || || | || ||||| Sbjct 841607 CCTGCACAGCTCGAGCAGGAACCAGCACGGCAAGAGTAAGGCAAGTCGATTCCGGCTTCC 841666 Query 32813 TCTGCTGCATCAAGGATGTA 32832 || || || ||||||| ||| Sbjct 841667 TCAGCAGCGTCAAGGACGTA 841686 >seq8 Length=29345952 Score = 111 bits (122), Expect = 2e-19 Identities = 105/132 (80%), Gaps = 3/132 (2%) Strand=Plus/Minus Query 27121 TGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGG 27180 ||||||||| || || || || |||||||| ||||| ||||| | ||| ||| || Sbjct 6844802 TGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATT--GAAATGG 6844745 Query 27181 TGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATA 27240 |||||||| || ||||| || ||||||||||||| ||| |||| |||||||||||||| Sbjct 6844744 TGCATAAGAATGTTGTGCTCAGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGAT- 6844686 Query 27241 CCAAGAGGCATA 27252 | ||||||||| Sbjct 6844685 TCTAGAGGCATA 6844674 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 32621 TCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACA 32680 ||||||| | ||||| || | |||||||||||||| || || ||||| ||||| ||| Sbjct 28015086 TCTTCTTTGTGGGTTTCGATGACGACATCAGAAGTTGGGTAAGCCACACAGGTGAGGACA 28015145 Query 32681 AACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTACCA 32740 |||| || | || || |||||||| ||||| ||| || | ||||| | || ||| Sbjct 28015146 TACCCCTCGCCCATCTGGTCATCATCTAAGAAGCTCTGGTCCGTCTGGTCAATTGAGCCA 28015205 Query 32741 GATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATCA 32800 || || | || || || || || || | || ||||| || |||||| | ||| Sbjct 28015206 GAGACGACTTTCCCGGCGCAGCTCGAGCAAGATCCCGCACGGCATGAGTAGGGCAGATCG 28015265 Query 32801 ACCCCACCTTCCTCTGCTGCATCAAGGATGTA 32832 | || ||||||| || || || |||| ||| Sbjct 28015266 ATACCTGCTTCCTCCGCGGCGTCGAGGACGTA 28015297 >seq390 Length=101491 Score = 100 bits (110), Expect = 4e-16 Identities = 94/117 (80%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 23994 GCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAG 24052 ||||| |||||||| || || || ||||| || || || | | || ||| || || || Sbjct 2367 GCAATTGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAAC-AGATCGAGCAAG 2309 Query 24053 TTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAA 24109 |||||| |||||||||||||||||||| | ||| || ||||| |||||||||||||| Sbjct 2308 TTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCACCATGGAGAGCAACAAA 2252 Score = 96.9 bits (106), Expect = 5e-15 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 23994 GCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAG 24052 ||||| |||||||| || || || ||||| || || || | | || ||| || || || Sbjct 10004 GCAATTGGACCAGAGAATGCGATTGCATTATAAGGTCGCAATTGAAC-AGATCGAGCAAG 9946 Query 24053 TTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAA 24109 |||||| |||||||||| ||||||||| | ||| || ||||| |||||||||||||| Sbjct 9945 TTCAAATTGACGTAACAAAAAACCTATTAATGCGAAAGCACCATGGAGAGCAACAAA 9889 Score = 89.7 bits (98), Expect = 7e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 23829 CCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCC 23888 ||||||| |||||| |||||||||||||| || ||||| | ||||| |||||||| | Sbjct 2475 CCCAGTACACCAGCGACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCGT 2416 Query 23889 TGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAA 23940 |||| ||| | | ||| | || || ||||| ||||| ||||| | ||||| Sbjct 2415 TGGAAAAAGTGGATGAATCGAAATATAGCCGCTACACCAAAACTAGACGCAA 2364 >seq17 Length=44223734 Score = 89.7 bits (98), Expect = 7e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 32621 TCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAACACAAGTGAGCACA 32680 ||||||| | ||||| || | |||||||||||||| || || ||||| || || ||| Sbjct 42227231 TCTTCTTTGTGGGTTTCGATGACGACATCAGAAGTTGGGTAAGCCACACAGGTAAGGACA 42227290 Query 32681 AACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTGGTCTACTGTA-CC 32739 ||||||| || || ||||| || ||||| ||| || | ||||| | || | || Sbjct 42227291 TACCCTTCGCTCATCTGGTCATCGTCTAAGAAGCTCTGGTCCGTCTGGTC-AATGAAGCC 42227349 Query 32740 AGATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGAGTAGTTTAAATC 32799 ||| || | || ||||| || ||| || | ||||| || || ||||| ||||| Sbjct 42227350 AGAGACGACTTTCCCTGCGCAGCTTGAGCAAGATCCTGCGCGGCACGAGTAAGGCAAATC 42227409 Query 32800 AACCCCACCTTCCTCTGCTGCATCAAGGATGTA 32832 | || ||||||| || || || |||| ||| Sbjct 42227410 GATACCTGCTTCCTCCGCAGCGTCGAGGACGTA 42227442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665413326144720