Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq8 143 3e-29 seq12 134 2e-26 seq5 116 4e-21 seq17 114 2e-20 seq14 114 2e-20 seq47 113 5e-20 seq13 111 2e-19 seq6 111 2e-19 seq2 104 3e-17 seq16 100 3e-16 seq785 95.1 1e-14 seq1 89.7 6e-13 seq1525 86.0 7e-12 seq18 86.0 7e-12 seq159 82.4 9e-11 seq7 82.4 9e-11 >seq8 Length=29345952 Score = 143 bits (158), Expect = 3e-29 Identities = 330/493 (67%), Gaps = 8/493 (2%) Strand=Plus/Plus Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTG-TGGATTTTCTCA 175249 |||||||| || | || | ||||| |||| ||| | | | || |||| ||||||| Sbjct 28984729 TGATGTTGCTGGAGTCGATGAAGCCAAGCATGA-CTTCATGGAAGTGGTGGAGTTTCTCA 28984787 Query 175250 AGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGG 175309 || | || ||||| | || ||||| |||||| ||| | ||||||| | Sbjct 28984788 AGAAGCCTGAGAGGTTCACTGCGGTCGGTGCTCGGATCCCTAAAGGTGTTCTTCTCGTTG 28984847 Query 175310 GTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCC 175369 || || ||||| || || || ||| | ||| |||||| || |||||| | ||| | Sbjct 28984848 GTCCTCCTGGTACTGGTAAAACTCTCTTGGCCAAAGCCATTGCTGGTGAAGCCGGTGTGC 28984907 Query 175370 CATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAA 175429 | ||| || ||| | | | ||||| ||||||||||||||||| ||||| | Sbjct 28984908 CTTTCTTCTCCATCTCGGGGTCTGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCTTCGA 28984967 Query 175430 GGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATG 175489 |||| || ||||| || | | || || ||| || ||||||||||| | || | Sbjct 28984968 GGGTGCGTGATCTTTTCAATAAGGCTAATGAGAATGCTCCGTGTATTGTCTTTGTGGACG 28985027 Query 175490 AGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGCCAGCAAATGACGAGA 175546 |||||||||| || || | ||| | | |||| |||| || ||||| || | Sbjct 28985028 AGATTGATGCTGTTGGTAGGCAGAGAGGGACTGGGATTGGTGG---AGGTAATGATGAAA 28985084 Query 175547 GAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCA 175606 |||| || || | ||||| || | || ||||||||||| ||||| | | ||||| Sbjct 28985085 GAGAGCAGACTTTGAATCAGCTCTTGACTGAGATGGATGGGTTTGAGGGTAACACTGGTG 28985144 Query 175607 TTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGG 175666 || | ||| |||| || |||||| | | ||||| ||||| |||| | || | || | Sbjct 28985145 TTATTGTTGTTGCTGCTACTAATAGAGCTGATATTCTTGACTCCGCCTTGCTGAGACCAG 28985204 Query 175667 GTCGTTTTGATCG 175679 | |||||||| || Sbjct 28985205 GGCGTTTTGACCG 28985217 >seq12 Length=60369500 Score = 134 bits (148), Expect = 2e-26 Identities = 200/284 (70%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||| ||||||||||| ||||| ||||| ||||| || ||||| || ||| ||| Sbjct 11969410 TTTGTTGAGATGTTTGTCGGTGTTGGTGCTTCGAGGGTCCGTGATCTTTTCAAAAAGGCC 11969469 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGC 175515 || || || ||||||||||| | |||||||||||||| || || | |||| | Sbjct 11969470 AAGGAGAACGCTCCTTGTATTGTCTTTGTGGATGAGATTGATGCTGTTGGTAGGCAAAGA 11969529 Query 175516 AGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACC 175575 | ||||| | || ||||| || |||||||| || |||| || || || || Sbjct 11969530 GGAACTGGTATTGGTGGAGGTAATGATGAAAGAGAACAGACGCTTAACCAGCTTCTGACG 11969589 Query 175576 GAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTG 175635 ||||||||||| ||||| | | ||||| || | ||| |||| || || || | | Sbjct 11969590 GAGATGGATGGTTTTGAAGGTAACACTGGTGTTATCGTTGTTGCTGCAACCAACAGAGCT 11969649 Query 175636 GATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 ||||| ||||| |||| | ||| | || || |||||||| || Sbjct 11969650 GATATTCTTGACTCCGCCTTGCTTAGACCCGGCCGTTTTGACCG 11969693 >seq5 Length=38841276 Score = 116 bits (128), Expect = 4e-21 Identities = 251/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || ||||| || ||||| || || || ||| ||||| |||||| | ||| || ||| Sbjct 7899920 CCCGGTACTGGGAAGACGCTTCTGGCGAAAGCTATCGCTGGTGAAGCTGGTGTGCCGTTC 7899861 Query 175375 ATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433 || || | ||| | | | || || ||||||||||| ||||| ||||| ||||| Sbjct 7899860 TTCTCAAT-CTCCGGGTCTGAGTTCGTTGAGATGTTTGTCGGTGTTGGTGCTTCCAGGGT 7899802 Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493 || ||||| || | | ||| || || || || || ||||| |||||||||| Sbjct 7899801 CCGTGATCTTTTCAAGAAGGCCAAGGAGAACGCTCCTTGCATCGTCTTTGTTGATGAGAT 7899742 Query 175494 TGATGCGGTGGGCAAGCAACG-----CAGCGCT-GGTGGTATGCCAGCAAATGACGAGAG 175547 |||||| || || | ||| | ||| | | ||||| || ||||| ||||| Sbjct 7899741 TGATGCTGTTGGGAGGCAGAGAGGGACAGGGATTGGTGG------AGGTAATGATGAGAG 7899688 Query 175548 AGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCAT 175607 |||||| || | || || || | || ||||||||||| ||||| | | ||||| || Sbjct 7899687 AGAACAGACTTTGAACCAGCTGTTGACTGAGATGGATGGGTTTGAAGGTAACACTGGTAT 7899628 Query 175608 TGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGG 175667 | ||| |||| || |||||| | | ||||| ||||| ||| | | | ||||| Sbjct 7899627 CATCGTTGTTGCTGCGACTAATAGAGCAGATATTCTTGACTCCGCTTTGTTGAGGCCGGG 7899568 Query 175668 TCGTTTTGATCG 175679 || ||||| || Sbjct 7899567 ACGGTTTGACCG 7899556 >seq17 Length=44223734 Score = 114 bits (126), Expect = 2e-20 Identities = 297/447 (66%), Gaps = 8/447 (2%) Strand=Plus/Plus Query 175237 GTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGC 175296 ||||| ||||| ||| | || ||||| | || |||||| |||||| ||| Sbjct 43157398 GTGGAGTTTCTGAAGAAGCCTGAGAGGTTCACTGCGGTTGGTGCTCGGATCCCGAAAGGT 43157457 Query 175297 GCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGT 175356 | ||| || | || || ||||| || || |||||| | || |||||||| ||| Sbjct 43157458 GTCCTCCTTGTTGGCCCTCCTGGTACTGGTAAAACCCTCTTGGCGAAGGCCATCGCTGGT 43157517 Query 175357 GAATCAAATGTCCCATTCAT--CCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTG 175414 ||| | ||| || ||| | ||| ||| | | | ||||| ||||||||||| | Sbjct 43157518 GAAGCTGGTGTACCTTTCTTTTCCAT--CTCGGGTTCTGAGTTTGTTGAGATGTTTGTCG 43157575 Query 175415 GTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTA 175474 |||| ||||| ||||| || ||||| || ||| ||| || ||| || || | Sbjct 43157576 GTGTTGGTGCTTCGAGGGTCCGTGATCTTTTCAAAAAGGCCAAGGAGAATGCTCCGTGCA 43157635 Query 175475 TTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGGTATGCC 175532 |||| || | || ||||||||||| || || | ||| | | |||| | | || Sbjct 43157636 TTGTTTTTGTGGACGAGATTGATGCTGTTGGTAGGCAGAGGGGAACTGGAATCG-GTG-G 43157693 Query 175533 AGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGA 175592 || ||||| || ||||| || || ||||||| || | || ||||||||||| ||||| Sbjct 43157694 AGGTAATGATGAAAGAGAGCAGACGCTTAATCAGCTCTTGACTGAGATGGATGGGTTTGA 43157753 Query 175593 CAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGC 175652 | | ||||| || | || |||| || || ||| | | ||||| ||||| || Sbjct 43157754 GGGTAACACTGGTGTTATTGTGGTTGCTGCAACCAATAGAGCAGATATTCTTGACTCTGC 43157813 Query 175653 CCTCCTTCGCCCGGGTCGTTTTGATCG 175679 | | || | || || |||||||| || Sbjct 43157814 CTTGCTGAGACCAGGGCGTTTTGACCG 43157840 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||||||| | || |||||||| ||||| || ||| | ||| | ||||| | || Sbjct 18261050 TTTGTGGAGCTTTTCGTTGGTGTTGGTGCGTCTAGAGTTAGGGATTTGTTTGAGAAGGCT 18260991 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGC 175515 | || || || ||||| ||||| |||||||||||||| ||||| | ||| | Sbjct 18260990 AAGGCCAAGGCGCCTTGCATTGTTTTCATCGATGAGATTGATGCTGTGGGGAGGCAGAGA 18260931 Query 175516 AGCGCTGG--TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCA 175573 | ||||| ||| | | || ||||| ||||| || || || |||||||| || | | Sbjct 18260930 GGAGCTGGGATGGGAGG--AGGGAATGATGAGAGGGAGCAGACGATTAATCAGCTGTTGA 18260873 Query 175574 CCGAGATGGATGGCTT 175589 | ||||||||||| || Sbjct 18260872 CTGAGATGGATGGGTT 18260857 >seq14 Length=28343526 Score = 114 bits (126), Expect = 2e-20 Identities = 296/448 (66%), Gaps = 10/448 (2%) Strand=Plus/Plus Query 175237 GTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGC 175296 ||||| ||||| ||| | || ||||| | || |||||| |||||| ||| Sbjct 17772746 GTGGAGTTTCTGAAGAAGCCTGAGAGGTTCACTGCGGTTGGTGCTCGGATCCCGAAAGGT 17772805 Query 175297 GCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGT 175356 | || || | ||| || ||||| || || |||||| | || ||||| || ||| Sbjct 17772806 GTTCTCCTTGTTGGTCCTCCTGGTACTGGTAAAACCCTCTTGGCAAAGGCCATTGCTGGT 17772865 Query 175357 GAATCAAATGTCCCATTCAT--CCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTG 175414 ||| | ||| || ||| | ||| ||| | | | ||||| |||||||| || | Sbjct 17772866 GAAGCTGGTGTACCTTTCTTTTCCAT--CTCAGGTTCTGAGTTTGTTGAGATGTTCGTCG 17772923 Query 175415 GTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTA 175474 |||| ||||| |||||| || ||||| || ||| ||| ||||| || || | Sbjct 17772924 GTGTTGGTGCTTCAAGGGTCCGTGATCTTTTCAAAAAGGCCAAGGAAAACGCTCCCTGCA 17772983 Query 175475 TTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGC 175531 ||||||| | ||||| || ||||| || || | |||| | | | || |||| Sbjct 17772984 TTGTCTTTGTGGATGAAATAGATGCTGTTGGTAGGCAAAGAGGAACCGGAATTGGTGG-- 17773041 Query 175532 CAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTG 175591 || ||||| || |||||||| || ||||||| || | || ||||||||||| |||| Sbjct 17773042 -AGGTAATGATGAAAGAGAACAGACGCTTAATCAGCTCTTGACGGAGATGGATGGTTTTG 17773100 Query 175592 ACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACG 175651 | | | ||||| | | || |||| || || || | | ||||| ||||| | Sbjct 17773101 AAGGTAACACTGGTGTCATCGTAGTTGCTGCAACCAACAGAGCAGATATTCTTGACTCTG 17773160 Query 175652 CCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 || | ||| | || || |||||||| || Sbjct 17773161 CCTTGCTTAGACCAGGCCGTTTTGACCG 17773188 Score = 91.5 bits (100), Expect = 2e-13 Identities = 279/423 (66%), Gaps = 15/423 (4%) Strand=Plus/Minus Query 177549 GAAGCACATTTCAACAAACTGCCTC-ACAGAGTGTGTCTCCCCCGTCGCGACAACATATT 177607 |||| ||| || | ||||| |||| || | ||||| |||| | || || || || || | Sbjct 8372749 GAAGGACACCTCCAGAAACT-CCTCGACGGTGTGTGACTCCTCAGTTGCCACCACGTAGT 8372691 Query 177608 CATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGAC 177667 |||| | | || || || ||||| |||||||| || || || |||||| || | Sbjct 8372690 CATCTGGTTTGTCCTGCTGCAGCATCAGCCACATTGCCTCTACGTAGTCCCCCGCGAACC 8372631 Query 177668 CCCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAG---GAACT-CTCTCTCACCTTTC 177723 |||||||||| | || | | ||| || || ||| | || | || ||||| Sbjct 8372630 CCCAGTCTCTTGACGCCTGTATGTTTCCCAGGAAAAGCTTGGTCTGCAGTCCGACCTTGA 8372571 Query 177724 ACAATTTGTTTGACGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGT 177783 | | | ||| | || |||||| || || |||| | ||||| | || Sbjct 8372570 TCC---TCCCCAAGGCCCTG-GTTATCTTCCGAGTCACGAAGTTCTCGCCTCGGCGAGGC 8372515 Query 177784 GATTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTT 177843 || ||||||||||| ||||| ||| ||||| ||||| || || | ||| ||||| || Sbjct 8372514 GACTCGTGGTTGAACAGGATCCCGTTACAGGCGTACATGCCGTATGCTTCACGGTAGTTG 8372455 Query 177844 TTGACGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGT 177903 | | ||||||||| || |||||||| | ||||| |||| || | || || Sbjct 8372454 ACGGTGTACCAGTGAGCAGCGCATTTGGAGGCAGCATAGGGAGATCTCGGATGAAACGGC 8372395 Query 177904 GTCTCCTCAGTTTGTGGAGTTTCTCGGACTTTA-CCAAACATCTCCGAAGTTGAGGCTTG 177962 ||| ||||| ||| |||| ||| || | || ||||||||||| | | ||| || Sbjct 8372394 GTCGTCTCAGATTGCGGAG----GAGGAGTTGACCCGAACATCTCCGAGGATCCGGCCTG 8372339 Query 177963 GTA 177965 ||| Sbjct 8372338 GTA 8372336 >seq47 Length=709205 Score = 113 bits (124), Expect = 5e-20 Identities = 277/419 (66%), Gaps = 6/419 (1%) Strand=Plus/Minus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| | ||||| ||||| ||| | || ||||| | || ||||||| |||||| Sbjct 641466 GAGGTGGTGGAGTTTCTGAAGAAGCCTGAGAGGTTCACTGCGGTTGGTGCCCGGATCCCG 641407 Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350 ||| | || || ||| || ||||| || ||||| || | || ||| || Sbjct 641406 AAAGGTGTTCTGCTTATTGGTCCTCCTGGTACTGGGAAGACGCTTTTGGCGAAAGCTATT 641347 Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTT 175410 || |||||| | ||| || ||| || ||| | | | ||||| ||||||||| Sbjct 641346 GCCGGTGAAGCTGGTGTGCCTTTCTTCTCCATCTCCGGATCTGAGTTTGTTGAGATGTTT 641287 Query 175411 GTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCA 175470 || ||||| |||||| ||||| || ||||| || | | ||| || || || Sbjct 641286 GTCGGTGTTGGTGCCTCGAGGGTCCGTGATCTTTTCAAGAAGGCCAAGGAGAACGCTCCT 641227 Query 175471 TGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGT 175527 || |||||||| | |||||||||||||| || || | |||| | | | || |||| Sbjct 641226 TGCATTGTCTTTGTAGATGAGATTGATGCTGTTGGTAGGCAAAGAGGAACAGGAATTGGT 641167 Query 175528 ATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGC 175587 || ||||| || ||||| || || | ||||| || || || ||||||||||| Sbjct 641166 ---GGAGGTAATGATGAAAGAGAGCAGACTTTGAATCAGCTGCTAACTGAGATGGATGGG 641110 Query 175588 TTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGA 175646 ||||| | | ||||| || | ||| |||| || || ||| | | || || ||||| Sbjct 641109 TTTGAAGGTAACACTGGTATCATCGTTGTTGCTGCAACCAATAGAGCAGACATTCTTGA 641051 >seq13 Length=83567108 Score = 111 bits (122), Expect = 2e-19 Identities = 216/317 (68%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || |||||||| ||| ||| || |||| |||| || || || || ||||| || Sbjct 7106446 GGCGCCAAGATTCCCAAAGGGTGTCTCCTCGTGGGTCCCCCCGGGACTGGGAAGACGCTT 7106505 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 | || |||| | || || || | || || ||| || ||| | || | | Sbjct 7106506 TTAGCTAGAGCTGTGGCTGGAGAGGCTGGAGTGCCGTTCTTCTCCTGCGCGGCGTCTGAG 7106565 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||| ||| | || ||||||||||||||| |||||| | ||| | ||||| | || Sbjct 7106566 TTTGTTGAGCTTTTCGTTGGTGTGGGTGCCTCTAGGGTTAGGGATTTGTTTGAGAAGGCT 7106625 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGC 175515 | || || |||||||| || ||||||||||||||||| ||||| | ||| | Sbjct 7106626 AAGGCTAAGGCGCCTTGTATTGTTTTTATTGATGAGATTGATGCTGTGGGGAGGCAGAGA 7106685 Query 175516 AGCGCTGG--TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCA 175573 | ||||| ||| | | || ||||| ||||| || || || |||||||| | || | Sbjct 7106686 GGAGCTGGGATGGGAGG--AGGGAATGATGAGAGGGAGCAGACGATTAATCAGTTGCTGA 7106743 Query 175574 CCGAGATGGATGGCTTT 175590 | ||||||||||| ||| Sbjct 7106744 CTGAGATGGATGGGTTT 7106760 >seq6 Length=38054609 Score = 111 bits (122), Expect = 2e-19 Identities = 154/215 (72%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGT 65062 |||| |||| || | | ||||||||| ||||||| |||| ||| | ||| | | Sbjct 29819932 AAACCATACCTTGCGTCGCGAAGAAGGCCCAATGGGCCATGACGTGGATCGACGGA---T 29819988 Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 ||| | ||||||||| | | | |||||||| || ||||| || ||||||||||||| Sbjct 29819989 CTCAGACTTTCGCCGAGAGGATCGTGGCGTTTGCTTGCGTGGAAGGGATCTTCTTCTCCG 29820048 Query 65123 GGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT 65182 | |||||| | || | ||| |||||||||| || |||||||| || || ||||| Sbjct 29820049 GAAGCTTCTGCTCGATCTTCTGGCTGAAGAAGCGAGGGCTCATGCCTGGGTTAACCTTCT 29820108 Query 65183 CAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || || | || || ||||| || || || ||| Sbjct 29820109 CCAACGAGTTGATCTCTCGAGACGAAGGCCTTCAC 29820143 >seq2 Length=25468329 Score = 104 bits (114), Expect = 3e-17 Identities = 273/410 (67%), Gaps = 19/410 (5%) Strand=Plus/Plus Query 177564 AAACTGCCTC-ACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTT 177622 ||||| |||| || | ||| | |||| | || || || ||||| ||||| | | || | Sbjct 22510387 AAACT-CCTCGACGGTGTGCGACTCCTCAGTAGCCACCACATAGTCATCTGGTTTCTCCT 22510445 Query 177623 GTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCAG 177682 | || ||||| |||||||| || || || |||||| || ||||||||||||| | Sbjct 22510446 GCTGCAGCATCAGCCACATTGCCTCCACGTAGTCCCCTGCGAACCCCCAGTCTCTGGAGG 22510505 Query 177683 CGTTGAGGTTACCGAGTTCAAGGAACTCTCTCT-CACCTTTCACAATTTGTTTGACGCCA 177741 | | | ||| ||||| | || || ||| || | | | ||| | | ||| Sbjct 22510506 CCTGTATGTTCCCGAGG---AAGAGCTTCGTCTGCAGC---CCGACCTTGATCCTCCCCA 22510559 Query 177742 TCA-----GTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGA 177796 || |||||| || || |||| | ||||| | ||||| |||||||||| Sbjct 22510560 AGGCCCGTGTTATCTTCCGAGTCACGAAGTTCTCGCCTCGGCGGGGTGACTCGTGGTTGA 22510619 Query 177797 AGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGT 177856 | ||||| ||| |||||| |||| || || | ||||| |||||| | | ||||| Sbjct 22510620 ACAGGATCCCGTTGCAGGCGTACAGGCCGTATGCTTCTCTGTAATTGACGGTGTACCAGT 22510679 Query 177857 GAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTT 177916 |||| || | ||||||| | ||||| |||| |||| || || ||| ||||| | Sbjct 22510680 GAGCCGCGACTTTGGAGGCAGCATAGGGAGATCTCGGGTGAAACGGCGTCGTCTCAGACT 22510739 Query 177917 GTGGAGTTTCTCGGACTTTA-CCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 | |||| ||| || | || ||||||||||| | | ||| ||||| Sbjct 22510740 GCGGAG----GAGGAGTTGACCCGAACATCTCCGAGGATCCGGCCTGGTA 22510785 Score = 100 bits (110), Expect = 3e-16 Identities = 140/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 65022 GAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 ||||||||| ||||||| |||| ||| | ||| | |||| | ||||||||| | Sbjct 22243925 GAAGAAGGCCCAATGGGCCTTGAAGTGGATCGACGGA---TCTCAGACTTTCGCCGAGAG 22243869 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 | | || || ||||| ||||| || |||||||||||||| |||||| | || | Sbjct 22243868 GATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTTCTGCTCCATCTT 22243809 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || || |||||| || || || || || || Sbjct 22243808 CTGGCTCAAGAAGCGAGGGCTCATGCCGGGGCTCACCTTCTCCAACGAGCTGATCTCGCG 22243749 Query 65202 AGATGAGGGTCTCCAC 65217 || || || || ||| Sbjct 22243748 GGACGAAGGCCTTCAC 22243733 >seq16 Length=18736220 Score = 100 bits (110), Expect = 3e-16 Identities = 140/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 65022 GAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 ||||||||| ||||||| |||| ||| | ||| | || | |||| |||||| | Sbjct 836748 GAAGAAGGCCCAATGGGCCATGACGTGGATCGACGGA---TCACAGGCCTTTGCCGAGAG 836804 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 | | |||||||| || ||||| || ||||||||||| ||| |||||| | || | Sbjct 836805 GATCGTGGCGTTTGCTTGCGTGGAAGGGATCTTCTTCTCGGGGAGCTTCTGCTCGATCTT 836864 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || || |||||| || || || || || | Sbjct 836865 CTGGCTCAAGAAGCGTGGGCTCATGCCGGGGCTCACCTTCTCCAACGAGCTGATCTCGAG 836924 Query 65202 AGATGAGGGTCTCCAC 65217 ||| || || || ||| Sbjct 836925 AGACGAAGGCCTGCAC 836940 >seq785 Length=44800 Score = 95.1 bits (104), Expect = 1e-14 Identities = 279/424 (66%), Gaps = 17/424 (4%) Strand=Plus/Plus Query 177549 GAAGCACATTTCAACAAACTGCCTC-ACAGAGTGTGTCTCCCCCGTCGCGACAACATATT 177607 |||| ||| || | ||||| |||| || | ||||| |||| | || || || || || | Sbjct 34246 GAAGGACACGTCCAGAAACT-CCTCGACGGTGTGTGACTCCTCAGTTGCCACGACGTAAT 34304 Query 177608 CATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGAC 177667 |||| | | || || || |||||||||||||| || || || |||||| || | Sbjct 34305 CATCTGGTTTCTCCTGCTGCAGCATGAGCCACATTGCCTCGACGTAGTCCCCTGCGAACC 34364 Query 177668 CCCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAA 177727 |||||||||| | || | | ||| || || | || || ||| | || | Sbjct 34365 CCCAGTCTCTTGACGCCTGTATGTTTCCCAGG---AAGAGCTTGGTCTG--CAGTCCGAC 34419 Query 177728 TTTGTTTGACGCCATCAGTAATCTTCTTT-----GTGACAAAGTCGGCACCTCGTCTCGG 177782 ||| | | ||| | || ||| || || |||| | ||||| | || Sbjct 34420 CTTGATCCTCCCCAAGGCCCGTGTTATTTTACGAGTCACGAAGTTCTCGCCTCGACGGGG 34479 Query 177783 TGATTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATT 177842 ||| ||||||||||| ||||| ||| |||||| || | || || | ||||| |||||| Sbjct 34480 TGACTCGTGGTTGAACAGGATCCCGTTGCAGGCGTAGAGGCCGTATGCTTCTCTGTAATT 34539 Query 177843 TTTGACGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGG 177902 | | |||||||||||| | ||||||| | ||||| |||| || | ||||| Sbjct 34540 GACGGTGTACCAGTGAGCGGCGACTTTGGAGGCAGCATAGGGAGATCTGGGATGAAAGGG 34599 Query 177903 TGTCTCCTCAGTTTGTGGAGTTTCTCGGACTTTA-CCAAACATCTCCGAAGTTGAGGCTT 177961 || ||||| ||| |||| ||| || | || ||||||||||| | | ||| | Sbjct 34600 AGTGGTCTCAGATTGGGGAG----GAGGAGTTGAGCCGAACATCTCCGAGGATCCGGCCT 34655 Query 177962 GGTA 177965 |||| Sbjct 34656 GGTA 34659 >seq1 Length=45320942 Score = 89.7 bits (98), Expect = 6e-13 Identities = 196/289 (68%), Gaps = 10/289 (3%) Strand=Plus/Plus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 |||| ||||| | ||| | || | |||| |||| || ||||| || ||||| |||| Sbjct 23701512 TCAAGAAACTCCTCCACCGTATGCGACTCCTCCGTGGCCACAACGTAATCATCCGCCTTC 23701571 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| |||||||| || ||||| || ||| || ||||||||||| Sbjct 23701572 TCTTGCTGCAGCATCAGCCACATCGCCTCAACGTAATCCCCCGCGAACCCCCAGTCTCTC 23701631 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 | || | |||||| ||||| || || || || ||| | | || ||| | | Sbjct 23701632 GACGCCTGGAGGTTCCCGAG---AAAGAGCT-TC-CTCTGCAAACCCACCTTGATCCTCC 23701686 Query 177739 CCA----TC-AGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGT 177793 ||| || ||||||||| | || || |||| | || || | ||| || ||||||| Sbjct 23701687 CCAAGGCTCTCGTAATCTTCCTCGTCACGAAGTTCTCTCCACGGCGCGGAGACTCGTGGT 23701746 Query 177794 TGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATT 177842 |||| | ||| || || ||| | | ||| || | || ||||| || Sbjct 23701747 TGAACAAGATCCCATTACACGCAAAAAGACCGTAAGCCTCACGGTAGTT 23701795 >seq1525 Length=17276 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 |||| ||||| | ||| | || | |||| |||| || ||||| || ||||| |||| Sbjct 6076 TCAAGAAACTCCTCCACCGTATGCGACTCCTCCGTGGCCACAACGTAATCATCCGCCTTC 6017 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| |||||||| || ||||| || ||| || ||||||||||| Sbjct 6016 TCTTGCTGCAGCATCAGCCACATCGCCTCAACGTAATCCCCCGCGAACCCCCAGTCTCTC 5957 Query 177679 GCAGCGTTGAGGTTACCGAG 177698 | || | |||||| ||||| Sbjct 5956 GACGCCTGGAGGTTCCCGAG 5937 >seq18 Length=77673080 Score = 86.0 bits (94), Expect = 7e-12 Identities = 137/196 (70%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 65022 GAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 ||||||||| ||||||| |||| ||| | || ||| | | ||||||||| | Sbjct 68188489 GAAGAAGGCCCAATGGGCCATGACGTGGATCGATGG---GTCCCAGACTTTCGCCGAGAG 68188433 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 | | || || ||||| ||||| || |||||||||||||| |||||| | || | Sbjct 68188432 GATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGTAGCTTCTGCTCGATCTT 68188373 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || | |||||| || || || || || | Sbjct 68188372 CTGGCTCAAGAAGCGAGGGCTCATGCCCGGGTTGACCTTCTCCAACGAGCTGATCTCGAG 68188313 Query 65202 AGATGAGGGTCTCCAC 65217 ||| || || || ||| Sbjct 68188312 AGACGAAGGCCTTCAC 68188297 >seq159 Length=194462 Score = 82.4 bits (90), Expect = 9e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 76757 ACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTC 76816 || |||||||| || ||| || | || |||| ||||| | |||||||| |||| Sbjct 115890 ACTGTGTGGGAGATTAAGCAGAGAACAGTGGTTGATATGGCAGTTGATCGTGGATGCTTT 115949 Query 76817 ATTGATCAAAGTCAAAGTATGAATCTATTCATGGA-AAGTCCAACGATGTCCAAGCTCTC 76875 ||||||||||| |||||| ||||| || |||||| || ||||| || |||| ||| | Sbjct 115950 ATTGATCAAAGCCAAAGTTTGAATATACACATGGACAAACCCAACTTTG-CCAAACTCAC 116008 Query 76876 TTCTATGCATATGTACGCGTGGAAACAGG 76904 ||| | ||| | || | |||||| ||| Sbjct 116009 TTCCTTACATTTCCACACTTGGAAAAAGG 116037 >seq7 Length=28547970 Score = 82.4 bits (90), Expect = 9e-11 Identities = 155/225 (69%), Gaps = 11/225 (5%) Strand=Plus/Minus Query 177745 GTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATT 177804 || || ||| | || || |||| | ||||| | ||||| ||||||||||| ||||| Sbjct 13911121 GTTATTTTCCTAGTCACGAAGTTCTCGCCTCGGCGGGGTGACTCGTGGTTGAATAGGATC 13911062 Query 177805 CCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGAC---GAGCCAGTGAGCG 177861 ||| |||||| |||| || || | ||||||||| ||||| | ||| ||||| Sbjct 13911061 CCGTTGCAGGCGTACAGGCCGTATGCTTCTCGGTA---GTTGACTGTGTACCAATGAGCA 13911005 Query 177862 GCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGA 177921 || |||||||| | | || |||| |||| || || ||| ||||| ||| ||| Sbjct 13911004 GCGCATTTGGAGGCAGCGTAAGGAGATCTCGGGTGAAACGGCGTCGTCTCAGATTGCGGA 13910945 Query 177922 GTTTCTCGGACTTTA-CCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 | ||| || | || ||||||||||| | | ||| ||||| Sbjct 13910944 G----GAGGAGTTGACCCGAACATCTCCGAGGATCCGGCCTGGTA 13910904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596496922908480