Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq13 107 4e-18 seq18 104 5e-17 seq9 104 5e-17 seq10 96.9 7e-15 seq8 95.1 2e-14 seq17 91.5 3e-13 seq148 89.7 1e-12 seq5141 87.8 4e-12 seq5138 87.8 4e-12 seq103 87.8 4e-12 seq91 87.8 4e-12 seq15 87.8 4e-12 seq1 87.8 4e-12 seq12 86.0 1e-11 >seq13 Length=83567108 Score = 107 bits (118), Expect = 4e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||| || | |||||||| || || || | |||| || ||| || || || || || Sbjct 62924116 ATACCCCCACGTAGACGTAAGACCAAGTGAAGTGTAGATTCCTTTTGA-ATGTTGTAGTC 62924058 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | || || |||| || | ||| || ||||||||||| || ||||| || ||||| Sbjct 62924057 AGCAAGAGTACGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGG 62923998 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || || || ||||| || || || ||| ||||| || | |||||| || Sbjct 62923997 AGGAATACCCTCCTTATCCTGAATCTTCGCTTTAACATTGTCGATGGTATCTGAACTCTC 62923938 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | |||||||||||| ||||| || || || | ||| |||||||| Sbjct 62923937 CACCTCCAAAGTAATGGTTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 62923887 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || ||||| ||||| | || | || | || | ||| || ||| || ||||| | Sbjct 48378064 CCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 48378123 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||| | | || |||| || || || || ||||| | || ||| ||||| ||||| Sbjct 48378124 AGTGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGATCCGGTGGG 48378183 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| || || || || || ||| ||||| || | ||||| ||||| || Sbjct 48378184 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATCGTGTCTGATGATTCGACC 48378243 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| || || || || || |||| ||||| | ||| ||||||||||| Sbjct 48378244 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 48378293 >seq18 Length=77673080 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || | ||| | || | ||| || |||||| || ||| Sbjct 62463117 ATACCACCTCTCAGACGAAGCACAAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCA 62463058 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || ||| |||| || | || ||||| |||||||| | ||||| ||||| ||| Sbjct 62463057 GCAAGCGTGCGTCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGT 62462998 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| |||||||| || || ||| || || || ||| | ||||| || Sbjct 62462997 GGGATTCCCTCTTTATCCTGGATCTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCA 62462938 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || ||||||||||| || | || || | ||| || ||||| Sbjct 62462937 ACCTCCAAGGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 62462888 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | |||||| | ||||| || | ||| | ||| || ||| || ||||||| Sbjct 62463798 CCACCACGAAGACGAAGAACTAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 62463739 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || | |||| || | ||||||||||| ||||| | ||||||||| || || || Sbjct 62463738 AAAGTCCTACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 62463679 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| || || || || ||| || ||||| || | ||||| || ||| Sbjct 62463678 ATCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAACT 62463619 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | || || || || || || || || || | ||| || ||||| Sbjct 62463618 TCCAAGGTTATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 62463572 >seq9 Length=62778564 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||||| || || || | ||| | ||| || || || || ||| Sbjct 30454974 ATGCCACCACGGAGACGTAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCA 30454915 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | || || || |||||||| || ||||| || || || Sbjct 30454914 GCCAAGGTACGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGA 30454855 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||| || || |||| || || || Sbjct 30454854 GGAATGCCTTCTTTGTCTTGGATTTTGGCTTTCACGTTGTCAATAGTGTCGGAACTCTCC 30454795 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||||||||||||| || || || | || || | ||| |||||||| Sbjct 30454794 ACTTCTAGAGTAATGGTCTTCCCGGTAAGGGTCTTGACAAAGATCTGCAT 30454745 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | ||||| || || || || | |||| ||| || ||| || || || Sbjct 30497386 ATACCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCC 30497327 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | ||||||| | || || | ||| || || |||||||| || ||||| || || || Sbjct 30497326 GCCAATGTTCTGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGA 30497267 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || ||| || || || || | || || || Sbjct 30497266 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCAATTGTGTCGGAGCTCTCC 30497207 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||||||||||||| || || || ||||| || | ||| |||||||| Sbjct 30497206 ACCTCTAGAGTAATGGTCTTCCCTGTCAATGTCTTGACAAAGATCTGCAT 30497157 >seq10 Length=22354415 Score = 96.9 bits (106), Expect = 7e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | |||||| | || ||||| | ||| | ||| || || || ||||| | Sbjct 21870565 CCACCACGAAGACGCAGAACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAATCTGCA 21870506 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || || |||| || | ||||||||||| ||||| | ||||||||| || || || Sbjct 21870505 AGCGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGA 21870446 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| || || || || ||| || ||||| || | ||||| ||| ||| Sbjct 21870445 ATCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCGATTGTGTCTGAGCTTTCAACT 21870386 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || | ||||| || || || || || || || | |||||| |||||| Sbjct 21870385 TCCAAGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAATATTTGCATT 21870338 >seq8 Length=29345952 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| ||||| || | || || || | ||| | |||||| || || || |||| | Sbjct 8464487 CCACCCCTAAGCCGCAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGCT 8464428 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||||| |||| || | |||||| ||||||||||| | |||||||||||||||||| Sbjct 8464427 AGCGTTCGACCATCCTCAAGTTGTTTCCCAGCAAAGATGAGCCTCTGTTGATCAGGTGGT 8464368 Query 192430 ATTCCTTCTTTATCTTG 192446 || || ||||| || || Sbjct 8464367 ATCCCCTCTTTGTCCTG 8464351 >seq17 Length=44223734 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||| || || | ||| | ||| | ||| || ||| || || |||| || |||| Sbjct 38928085 AGACGCAACACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTTCTA 38928026 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 |||| || | || || || |||||||| || ||||| ||||||||||| ||||| || Sbjct 38928025 CCATCCTCGAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGATCAGGTGGGATTCCCTCC 38927966 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 || ||||| || ||| || || ||| || | || || || || ||||| || Sbjct 38927965 TTGTCTTGGATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACCTCTAGTGTG 38927906 Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || | ||| || | ||| |||||||| Sbjct 38927905 ATCGTCTTTCCGGTGAGTGTCTTGACAAAGATCTGCAT 38927868 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||||||||| | || || | || | ||| | |||||| ||| || || || | Sbjct 24310228 CCACCTCTAAGCCTCAAGACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 24310287 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||||| |||| || | |||||||||||| || || | ||||| ||||| |||||| Sbjct 24310288 AGGGTTCGACCATCTTCAAGTTGTTTACCAGCGAATATCAGCCTCTGCTGATCCGGTGGT 24310347 Query 192430 ATTCCTTCTTTATCTTGT 192447 ||||||||||| || ||| Sbjct 24310348 ATTCCTTCTTTGTCCTGT 24310365 >seq148 Length=210760 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| ||||| | || || || || | ||| | |||||| ||| || || |||| Sbjct 36849 CCACCCCTAAGCCTCAAGACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGCC 36908 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||||| |||| || | |||||| ||||||||||| | ||||||||||| |||||| Sbjct 36909 AGCGTTCGGCCATCCTCTAGTTGTTTCCCAGCAAAGATGAGCCTCTGTTGATCTGGTGGT 36968 Query 192430 ATTCCTTCTTTATCTTG 192446 || || ||||| || || Sbjct 36969 ATCCCCTCTTTGTCCTG 36985 >seq5141 Length=2555 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||||||||| | || || | || | ||| | |||||| ||| || || || | Sbjct 812 CCACCTCTAAGCCTCAAGACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 871 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||||| |||| || | |||||||||||| || || | ||||| ||||| |||||| Sbjct 872 AGGGTTCGACCATCTTCAAGTTGTTTACCAGCGAATATCAGCCTCTGCTGATCCGGTGGT 931 Query 192430 ATTCCTTCTTTATCTTGT 192447 ||||||||||| || ||| Sbjct 932 ATTCCTTCTTTGTCCTGT 949 >seq5138 Length=2557 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||||||||| | || || | || | ||| | |||||| ||| || || || | Sbjct 812 CCACCTCTAAGCCTCAAGACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 871 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||||| |||| || | |||||||||||| || || | ||||| ||||| |||||| Sbjct 872 AGGGTTCGACCATCTTCAAGTTGTTTACCAGCGAATATCAGCCTCTGCTGATCCGGTGGT 931 Query 192430 ATTCCTTCTTTATCTTGT 192447 ||||||||||| || ||| Sbjct 932 ATTCCTTCTTTGTCCTGT 949 >seq103 Length=295709 Score = 87.8 bits (96), Expect = 4e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||||| || || || || | || | |||||| || || || |||| Sbjct 165375 ACCACCACGGAGACGCAAGACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAGTCAGC 165316 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || ||| || |||| || | || || ||||||||||| | | ||| || || || || Sbjct 165315 TAGTGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGG 165256 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || ||||| || || |||||| ||| || || || | || || || || Sbjct 165255 AATGCCCTCTTTGTCCTGAATTTTAGCTTTGACGTTGTCAATGGTGTCAGAGCTCTCAAC 165196 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||||||||| || || || || | || || | ||| |||||||| Sbjct 165195 TTCTAGAGTAATCGTCTTTCCGGTGAGGGTCTTCACAAAGATCTGCAT 165148 >seq91 Length=316697 Score = 87.8 bits (96), Expect = 4e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||||| || || || || | || | |||||| || || || |||| Sbjct 307498 ACCACCACGGAGACGCAAGACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAGTCAGC 307439 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || ||| || |||| || | || || ||||||||||| | | ||| || || || || Sbjct 307438 TAGTGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGG 307379 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || ||||| || || |||||| ||| || || || | || || || || Sbjct 307378 AATGCCCTCTTTGTCCTGAATTTTAGCTTTGACGTTGTCAATGGTGTCAGAGCTCTCAAC 307319 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||||||||| || || || || | || || | ||| |||||||| Sbjct 307318 TTCTAGAGTAATCGTCTTTCCGGTGAGGGTCTTCACAAAGATCTGCAT 307271 >seq15 Length=50573455 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||| || || || || | || | ||| || |||||| || |||| || || || Sbjct 31711014 AGACGCAACACCAAGTGAAGCGTGGACTCCTTCTGGATATTGTAGTCAGCCAAGGTACGA 31711073 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 | || || | || |||||||||||||| |||||||| || || ||||| || || || Sbjct 31711074 CCGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCCGGTGGGATACCCTCC 31711133 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 || ||||| || || || || || || | || || || || |||||||| Sbjct 31711134 TTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACCTCTAGAGTG 31711193 Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| || || || || || | ||| |||||||| Sbjct 31711194 ATTGTTTTTCCTGTCAAGGTCTTGACAAAGATCTGCAT 31711231 >seq1 Length=45320942 Score = 87.8 bits (96), Expect = 4e-12 Identities = 133/186 (72%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| ||||||| | | || || |||| || | | || ||| | |||| || | ||| Sbjct 18518364 GATGTTATAATATGCAAGCGTGCGACCATCTTCGAGTGGTCTACTACCAAACATGATTCT 18518423 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||||| ||||| || ||||| || ||||| || || | |||||| || | | | | Sbjct 18518424 CTGTTGATTTGGTGGGATCCCTTCCTTGTCTTGAATCTTTTCCTTTACA-TACTCA-ACA 18518481 Query 192474 A--TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATC 192531 | ||| | || ||||||| ||||||||||||| | | |||||||| | ||||| Sbjct 18518482 ATGTCTAAGCTGTCAACTTCTAAGGTAATGGTTTTACGACTGAATGTTTTCACGAATATT 18518541 Query 192532 TGCATT 192537 |||||| Sbjct 18518542 TGCATT 18518547 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || | |||||| || || || || | |||| ||| || ||| || ||||| Sbjct 18861560 ATGCCTCCACGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCT 18861619 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | || || ||||||||||| || ||||| || || ||| Sbjct 18861620 GCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGT 18861679 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| || || ||| || || |||| || || ||| Sbjct 18861680 GGGATACCCTCTTTGTCTTGGATCTTGGCTTTGACGTTGTCAATAGTGTCGGAGCTTTCA 18861739 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| || || || || || || || |||| || || ||||| Sbjct 18861740 ACCTCCAAAGTGATAGTCTTTCCCGTCAAAGTCTTAACGAAGATTTGCAT 18861789 >seq12 Length=60369500 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/158 (73%), Gaps = 13/158 (8%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| || | |||||||||| |||| || | ||||||| | | ||||| || ||||| | Sbjct 16927700 CATCCTCAAGTTGTTTACCATCAAACATGATTCTCTGTAGGTTTGGTGGGATCCCTTCCT 16927759 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | |||| | ||| | ||| | ||| ||| ||| || ||||||| |||| Sbjct 16927760 TGTCTT----TACATTCTCAACAAT-GTT---GAAGCTG-----TCAACTTCTAAGGTAA 16927806 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||||||||||| || ||||| | |||||| |||||| Sbjct 16927807 TGGTTTTACCAGTGAACGTTTTCACAAATATTTGCATT 16927844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984357067367100