Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq18 188 1e-41 seq16 178 2e-38 seq2 178 2e-38 seq6 176 7e-38 seq4 120 5e-21 seq13 104 4e-16 >seq18 Length=77673080 Score = 188 bits (208), Expect = 1e-41 Identities = 179/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || ||||| || |||||| || ||| |||||||| ||||| ||| Sbjct 68188628 GCCTCGGAGACCTGGACGTCGGACATGAACCGTGAGGCGAGGTTCTCGAGGACGATTCCG 68188687 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| |||||||||||||| ||||| ||||| ||||| ||||| |||| Sbjct 68188688 TCGGAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCTCCGTCGTTGAGA 68188747 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 |||||| | ||||| | ||||||||| |||||||||||||| ||||||||| Sbjct 68188748 TTCTCCCAGTCGCGTGTGTCCTGGGAGAGGTCGACTTCCTCGGCGGTCCAGAAGGAGGCC 68188807 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 |||||||| |||||||||||||| ||| | |||| |||| ||||||| Sbjct 68188808 TCGGCCTTCTTGTACATCTCCCAGATCTGCGGGTATTGGATTGGGAACA 68188856 Score = 176 bits (194), Expect = 7e-38 Identities = 233/324 (72%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| | ||||| |||||| ||| | ||||||||||| || |||||| Sbjct 68188304 CCTTCGTCTCTCGAGATCAGCTCGTTGGAGAAGGTCAACCCGGGCATGAGCCCTCGCTTC 68188363 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | ||||| || || ||||| ||||| || || ||| || ||| Sbjct 68188364 TTGAGCCAGAAGATCGAGCAGAAGCTACCGGAGAAGAAGATCCCTTCCACGCACGCGAAG 68188423 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | |||| || |||||| ||||| | || || ||||||| |||| ||||| Sbjct 68188424 GCCACGATCCTCTCGGCGAAAGTCTGGGACCCATC------GATCCACGTCATGGCCCAT 68188477 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| ||| || |||| | || ||||| ||||| ||||| |||||| |||| Sbjct 68188478 TGGGCCTTCTTCGCGACGCAGGGGATGGTCTCGATCGCGCGGAAGAGATGGTCCCTCTCC 68188537 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 |||||||| ||| ||||| | ||||| ||| |||| ||||||||||| ||| Sbjct 68188538 TTGTTGTCCTTGATGTACGTGTCTAACAGGAGGCTGTACATCTCGGAGTGGATGTTCTCG 68188597 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 || ||||||||||| || || ||| Sbjct 68188598 ATCGCGATCTGGAACCCGTAGAAG 68188621 Score = 123 bits (136), Expect = 4e-22 Identities = 209/295 (71%), Gaps = 6/295 (2%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| |||||||| || |||| |||||||||||||||||||| ||||| || || Sbjct 68188015 CTCGAAGAAGTTGGTTTTCCCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGC 68188074 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044 || ||| |||| || |||| |||| | | || || | || || || || || || Sbjct 68188075 CGCACCGTACACCTTCCCGTACCCAAGCGCCCCCAGAAGCCTATCCGCCACAAACTCGAT 68188134 Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGA 794103 |||||| | ||| ||| | |||||| || | | ||| ||| || |||| |||| | Sbjct 68188135 GTACTGACTCATCAGGTCACGGTTCATCCCCACCAACGCGCAC-GGAAGCGCGTCGCACA 68188193 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGAC 794162 ||||||| |||||||||| ||||| ||| | |||| | || | || || || Sbjct 68188194 CAAACTCCCTCTCGATCTCCACGGCGTCGCACACGATC-GACTTCACGCGCTCCTCCGTG 68188252 Query 794163 GGCTT-GTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 |||| ||| | || | |||||||| |||||| || || ||||| || || ||| Sbjct 68188253 AGCTTCGTCCTC-AGGAGCGTGTAGATCAGGCACGCGAAATCGCAGTGAAGGCCT 68188306 >seq16 Length=18736220 Score = 178 bits (196), Expect = 2e-38 Identities = 236/326 (72%), Gaps = 10/326 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| | ||||| |||||| ||| ||| || |||||||| || |||||| Sbjct 836933 CCTTCGTCTCTCGAGATCAGCTCGTTGGAGAAGGTGAGCCCCGGCATGAGCCCACGCTTC 836874 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | ||||| || |||||||| ||||| || || ||| ||||| Sbjct 836873 TTGAGCCAGAAGATCGAGCAGAAGCTCCCCGAGAAGAAGATCCCTTCCACGCAAGCAAAC 836814 Query 794461 CCGACGAGCCGCTCGGCAAAAG--TGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 | |||| || ||||||||| | ||| | || || ||||||| |||| |||| Sbjct 836813 GCCACGATCCTCTCGGCAAAGGCCTGT---GATCC-----GTCGATCCACGTCATGGCCC 836762 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 | | ||||| ||| || |||| | ||| ||||| ||||| ||||| |||||| ||| Sbjct 836761 ATTGGGCCTTCTTCGCGACGCAGGGGATCGTCTCGATCGCGCGGAAGAGATGGTCCCTCT 836702 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | ||||||| ||| || || | ||||| ||| |||| ||||||||||| | Sbjct 836701 CTCTATTATCCTTGATGTAAGTATCTAACAGGAGACTGTACATCTCGGAGTGGATGTTCT 836642 Query 794639 CGATGGCGATCTGGAAGCCATAAAAG 794664 |||| ||||||||||| || || ||| Sbjct 836641 CGATCGCGATCTGGAACCCGTAGAAG 836616 Score = 161 bits (178), Expect = 2e-33 Identities = 176/233 (76%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 796149 GGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208 |||||||| || ||||| || |||||| || ||| |||||||| ||||| || Sbjct 836610 GGCCTCGGAGACCTGGACGTCGGACATGAAACGAGAGGCGAGGTTCTCGAGGACGATCCC 836551 Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268 |||| |||||||| |||||||||||||| |||| ||||| ||||| ||||| |||| Sbjct 836550 GTCGGATGCGGCGAAGAAGGCGAGGACGTGTTTGACGAAGTGGCGCTCTCCGTCGTTGAG 836491 Query 796269 CGAGACC---CAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 || |||| | | ||| | ||||||||| |||||||||||||| ||||| Sbjct 836490 ATTTTCCTCCCAGTCGCGGGGGTCTTGGGAGAGGTCGACTTCCTCGGCGGTCCAGAAGGA 836431 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||| ||||| || |||||||||||||| ||| | ||||| |||| ||||||| Sbjct 836430 GGCTTCGGCTTTCTTGTACATCTCCCAGATCTGAGGGTAGTGGATCGGGAACA 836378 Score = 107 bits (118), Expect = 3e-17 Identities = 206/297 (69%), Gaps = 10/297 (3%) Strand=Plus/Minus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| ||||| || || |||| |||||||||||||||||||| ||||| || || Sbjct 837222 CTCGAAGAAGTTCGTTTTACCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGC 837163 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044 | ||| |||| || |||| |||| | | || | || || || || ||||| Sbjct 837162 CACACCGTACACCTTCCCGTACCCAAGCGCTCCCAACAACCTATCCGCCACAAACTCAAT 837103 Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGA 794103 ||||| | ||| || | |||||| || | | ||| |||||| |||| |||| | Sbjct 837102 ATACTGACTCATCAGTTCACTGTTCATCCCCACCAACGCGCACGGG-AGCGCGTCGCACA 837044 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG---TCGGACG 794160 ||||||| |||||||||| || || ||| | |||| ||| |||| || || Sbjct 837043 CAAACTCCCTCTCGATCTCCACCGCGTCGCACACGATCGACCT---CACGCGCTCCTCCG 836987 Query 794161 ACGGCTT-GTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 | |||| ||| | || | | ||||| |||||| || |||||||| ||||| ||| Sbjct 836986 AGAGCTTCGTCCTC-AGGAGGGAGTAGATCAGGCACGCGAAGTCGCAGTGCAGGCCT 836931 >seq2 Length=25468329 Score = 178 bits (196), Expect = 2e-38 Identities = 179/232 (77%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || || || || |||||| ||| ||| || ||||| ||||| ||| Sbjct 22244064 GCCTCGGAGACCTGCACGTCGGACATGAACCGGGAGGCGAGATTCTCGAGGACGATTCCG 22244123 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| |||||||||||||| ||||| ||||| |||||| ||||| |||| Sbjct 22244124 TCGGAGGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCGCCGTCGTTGAGG 22244183 Query 796270 GAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | ||||| | ||||||||| |||||||||||||| |||||| Sbjct 22244184 TTGGTCTCCCAGTCGCGGGTGTCTTGGGAGAGGTCGACTTCCTCGGCGGTCCAGAAGGAG 22244243 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 || ||||| || |||||||||||||| ||| | ||||| |||| ||||||| Sbjct 22244244 GCTTCGGCTTTCTTGTACATCTCCCAGATCTGAGGGTAGTGGATCGGGAACA 22244295 Score = 167 bits (184), Expect = 4e-35 Identities = 232/324 (72%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || ||||| |||||| ||| ||| || |||||||| || |||||| Sbjct 22243740 CCTTCGTCCCGCGAGATCAGCTCGTTGGAGAAGGTGAGCCCCGGCATGAGCCCTCGCTTC 22243799 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||||| || || ||||| ||||| || || ||| || ||| Sbjct 22243800 TTGAGCCAGAAGATGGAGCAGAAGCTTCCGGAGAAGAAGATCCCTTCCACGCACGCGAAG 22243859 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | |||| || |||||| ||||| | || || || ||||||||||| ||||| Sbjct 22243860 GCCACGATCCTCTCGGCGAAAGTCT-GAGATCC-----GTCGATCCACTTCAAGGCCCAT 22243913 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| ||| || | || | || || || ||||| ||||| |||||| |||| Sbjct 22243914 TGGGCCTTCTTCGCGACGCAAGGGATGGTCTCAATCGCGCGGAAGAGATGGTCCCTCTCC 22243973 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 |||||||| ||| || || | | ||| ||| |||| |||||||| || || Sbjct 22243974 TTGTTGTCCTTGATGTACGTATCTAGCAAGAGGCTGTACATCTCCGAGTGGATATTCTCA 22244033 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 || ||||||||||| || || ||| Sbjct 22244034 ATCGCGATCTGGAACCCGTAGAAG 22244057 Score = 96.9 bits (106), Expect = 5e-14 Identities = 203/295 (69%), Gaps = 6/295 (2%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| || || || || |||| |||||||||||||||||||| ||||| || || Sbjct 22243451 CTCGAAGAAATTCGTTTTACCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGC 22243510 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | ||| |||| || |||| |||| || ||| || | || || || || |||| Sbjct 22243511 CACACCGTACACCTTCCCGTACCCAAGCGCACCCAA-AAGCCTATCCGCCACAAACTCAA 22243569 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 | ||||| | ||| | | | |||||| || | | ||| ||| |||| |||| | Sbjct 22243570 TATACTGACTCATCAAGTCCCGGTTCATCCCCACCAACGCGCAGGGAAGCGCGTCGCACA 22243629 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGAC 794162 ||||||| |||||||||| || || ||| | |||| | || | || || ||| Sbjct 22243630 CAAACTCCCTCTCGATCTCCACCGCGTCGCACACGATC-GACTTCACGCGCTCCTCCGAT 22243688 Query 794163 GGCTT-GTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 |||| ||| | | || || |||| |||||| || |||||||| || || ||| Sbjct 22243689 AGCTTCGTCCTC-AACAAGGTATAGATCAGGCACGCGAAGTCGCAGTGAAGGCCT 22243742 >seq6 Length=38054609 Score = 176 bits (194), Expect = 7e-38 Identities = 234/324 (72%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| ||| |||||| |||||| ||| | || |||||||| || |||||| Sbjct 29820136 CCTTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTTAACCCAGGCATGAGCCCTCGCTTC 29820077 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||| | ||||| || || ||||| ||||| || || ||| ||||| Sbjct 29820076 TTCAGCCAGAAGATCGAGCAGAAGCTTCCGGAGAAGAAGATCCCTTCCACGCAAGCAAAC 29820017 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | |||| || |||||| ||||| | || || || ||||||| |||| ||||| Sbjct 29820016 GCCACGATCCTCTCGGCGAAAGTCTG-AGATCC-----GTCGATCCACGTCATGGCCCAT 29819963 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | ||||| ||| || | || | || || || ||||| |||||||||||| |||| Sbjct 29819962 TGGGCCTTCTTCGCGACGCAAGGTATGGTTTCAATCGCGCGGAAGAGGTGGTCCCTCTCT 29819903 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 ||||||| ||| ||||||| ||||| ||| ||||||||||||| || || Sbjct 29819902 TTATTATCCTTGATGTACGTGTCGAGCAGGAGGCTGTACATCTCTGAGTGGATATTCTCA 29819843 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 || ||||||||||| || || ||| Sbjct 29819842 ATCGCGATCTGGAACCCGTAGAAG 29819819 Score = 174 bits (192), Expect = 2e-37 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| ||||| || || |||||| ||| ||| || ||||| ||||| ||| Sbjct 29819812 GCCTCGGAGACTTGCACGTCGGACATGAACCGGGAGGCGAGATTCTCTAAAACGATTCCG 29819753 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||||| |||||||||||||| ||||| ||||| ||||| ||||| |||| Sbjct 29819752 TCGGATGCGGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCTCCGTCGTTGAGA 29819693 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 |||||| | ||||| | ||| ||||| || ||||||||||| || |||||| Sbjct 29819692 TTCTCCCAGTCGCGAGTGTCTTGGGAGAGATCGACTTCTTCGGCGGTCCAGAAAGAGGCC 29819633 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 |||||||| |||||||||||||| ||| | ||||| |||| ||||||| Sbjct 29819632 TCGGCCTTCTTGTACATCTCCCAGATCTGCGGGTAGTGGATCGGGAACA 29819584 >seq4 Length=33175494 Score = 120 bits (132), Expect = 5e-21 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||| || ||||||||||| || || |||||||||||| | || || || ||| | | | Sbjct 22971853 ACTTAGTAACGGCCTTGGTTCCTTCAGAGACGGCGTGCTTAGCGAGCTCACCGGGGAGAA 22971794 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 || | ||| ||||||||||||||||||| | ||||||| |||||| | || Sbjct 22971793 CGAGCCTCACAGCGGTCTGGATCTCGCGGGAGGTGATCGTGGGCTTCTTGTTGTACCTCG 22971734 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | || | |||||| | ||| |||| |||||||||| || |||||||| Sbjct 22971733 CGAGCTTGGAGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAGCTGTTCATGA 22971674 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 || ||| | ||| | ||||| || | ||| ||||| |||||||| || |||||| Sbjct 22971673 TCCCCATGGCCTTGCTCGAGATCCCGATGTCAGGGTGGACCTGCTTCAGGACCTTG 22971618 >seq13 Length=83567108 Score = 104 bits (114), Expect = 4e-16 Identities = 166/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 || |||||||||||||| ||||| ||||||||||| |||||| || || ||| | Sbjct 5822828 TTCGTGACGGCCTTGGTCCCCTCCGAGACGGCGTGTTTGGCCAACTCTCCAGGCAACACG 5822887 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGG---GTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 || | ||| || ||||| ||||| | | ||| | ||| || |||||| | | Sbjct 5822888 AGTCTCACCGCCGTCTGAATCTCCCTGGAAGTGATGGTCGGCTT---CTTGTTGTACCTC 5822944 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || || | | |||||| | ||| |||| |||||||||| || ||||||| Sbjct 5822945 GCGAGCTTGGCAGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAACTGTTCATG 5823004 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||| ||| | |||| | ||||| || | ||| ||||| |||||||| | ||||||| Sbjct 5823005 ATCCCCATAGCTTTGCTCGAGATCCCGATGTCTGGGTGGACCTGCTTCAACACCTTG 5823061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915209673528494