Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 132 6e-26 seq6 120 4e-22 seq16 116 4e-21 seq5 116 4e-21 seq2 116 4e-21 seq12 114 2e-20 seq13 113 5e-20 seq18 111 2e-19 seq17 111 2e-19 seq47 104 3e-17 seq14 102 1e-16 >seq8 Length=29345952 Score = 132 bits (146), Expect = 6e-26 Identities = 327/492 (66%), Gaps = 8/492 (2%) Strand=Plus/Minus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| || ||||| | || | ||| ||||| |||||| | | ||| || || Sbjct 28985217 CGGTCAAAACGCCCTGGTCTCAGCAAGGCGGAGTCAAGAATATCAGCTCTATTAGTAGCA 28985158 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | |||| || ||| || | | ||||| ||||||||||| ||||| || || || Sbjct 28985157 GCAACAACAATAACACCAGTGTTACCCTCAAACCCATCCATCTCAGTCAAGAGCTGATTC 28985098 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCC 9700 | ||| || || | ||||||||| || |||| |||| | | ||| | || Sbjct 28985097 AAAGTCTGCTCTCTTTCATCATTACCT---CCACCAATCCCAGTCCCTCTCTGCCTACCA 28985041 Query 9701 ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAG 9760 || ||||||||||| || | ||||| || || || ||| || ||| | || Sbjct 28985040 ACAGCATCAATCTCGTCCACAAAGACAATACACGGAGCATTCTCATTAGCCTTATTGAAA 28984981 Query 9761 AGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAA 9820 ||||| || || | | || || ||||||||||||||||| ||||| | | | | | Sbjct 28984980 AGATCACGCACCCTCGAAGCACCAACACCAACAAACATCTCAACAAACTCAGACCCCG-A 28984922 Query 9821 CATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879 || | || ||| || ||| | |||||| ||||||||| ||| | ||||| ||||| Sbjct 28984921 GATGGAGAAGAAAGGCACACCGGCTTCACCAGCAATGGCTTTGGCCAAGAGAGTTTTACC 28984862 Query 9880 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTA 9939 ||||| || ||| |||| || ||||| || ||| || || || | | Sbjct 28984861 AGTACCAGGAGGACCAACGAGAAGAACACCTTTAGGGATCCGAGCACCGACCGCAGTGAA 28984802 Query 9940 TCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAAT 9999 |||||||| | ||| ||||| ||||| | ||| || |||| ||||| | || | Sbjct 28984801 CCTCTCAGGCTTCTTGAGAAACTCCACCACTTCCATGAAGTCATGCTTGGCTTCATCGAC 28984742 Query 10000 CCCCTCAACATC 10011 || ||||||| Sbjct 28984741 TCCAGCAACATC 28984730 >seq6 Length=38054609 Score = 120 bits (132), Expect = 4e-22 Identities = 392/606 (65%), Gaps = 15/606 (2%) Strand=Plus/Plus Query 94345 GAACCTCTCCTAGCCCCCACACTAAACAGATTTACTG--TGTTCCCCCTGAAGTATCCAC 94402 || || || || |||| || | | ||||||| ||| ||||||| | | || || | Sbjct 29819547 GAGCCGCTTCTCACCCCAACCCCAGACAGATT--CTGCATGTTCCCGATCCACTACCCGC 29819604 Query 94403 ACCTCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATTGGACTGCTGAAGAGGTAGATC 94462 | ||||||| | || |||||||| | | ||||| || ||||| || |||| Sbjct 29819605 AGATCTGGGAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAAGAAGTCGATC 29819664 Query 94463 TCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAAAATGAAAAGAAATTCATAAAAT 94522 |||| | || ||| ||| ||| ||| || || || | ||||| ||| Sbjct 29819665 TCTCCCAAGACACTCGCGACTGGGAGAATCTCAACGACGGAGAGCGCCACTTCATCAAAC 29819724 Query 94523 ACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAATAACAACT 94582 || |||| || ||||| || | |||||| ||||| ||||| |||||| || | | Sbjct 29819725 ACGTCCTCGCCTTCTTCGCCGCATCCGACGGAATCGTTTTAGAGAATCTCG----CCTCC 29819780 Query 94583 TTGCTGATG----AGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCAT 94638 | | ||| | |||||| ||| || ||| | ||||||| | || ||| Sbjct 29819781 CGGTTCATGTCCGACGTGCAAGTCTCCGAGGCGCGTGCCTTCTACGGGTTCCAGATCGCG 29819840 Query 94639 AATGAAATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGT 94698 | ||| | | || |||| ||||| || | |||| ||| || |||||| | Sbjct 29819841 ATTGAGAATATCCACTCAGAGATGTACAGCCTCCTGCTCGACACGTACATCAAGGATAAT 29819900 Query 94699 GCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCG 94758 |||| | | || ||||| || || |||| | || || | ||||| || Sbjct 29819901 AAAGAGAGGGACCACCTCTTCCGCGCGATTGAAACCATACCTTGCGTCGCGAAGAAGGCC 29819960 Query 94759 GATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 94818 | ||||| |||| |||| | || | || | | || || ||| | || | || Sbjct 29819961 CAATGGGCCATGACGTGGATCGACGGA---TCTCAGACTTTCGCCGAGAGGATCGTGGCG 29820017 Query 94819 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAG 94878 ||||| || || || || ||||||||||| || ||||||| | || | ||||| ||| Sbjct 29820018 TTTGCTTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTTCTGCTCGATCTTCTGGCTGAAG 29820077 Query 94879 AAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGA 94938 |||||||| |||||||| || | ||||||||||||| | |||||||| ||||| || Sbjct 29820078 AAGCGAGGGCTCATGCCTGGGTTAACCTTCTCCAACGAGTTGATCTCTCGAGACGAAGGC 29820137 Query 94939 CTCCAC 94944 || ||| Sbjct 29820138 CTTCAC 29820143 >seq16 Length=18736220 Score = 116 bits (128), Expect = 4e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 ||||||| ||| | || | || ||||| || || || || ||||||||||| || || Sbjct 836792 CCTTTGCCGAGAGGATCGTGGCGTTTGCTTGCGTGGAAGGGATCTTCTTCTCGGGGAGCT 836851 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 ||||| | || | |||||||||||||| || |||||||| || ||| ||||||||||| Sbjct 836852 TCTGCTCGATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCGGGGCTCACCTTCTCCAACG 836911 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||| | ||||| || || ||| Sbjct 836912 AGCTGATCTCGAGAGACGAAGGCCTGCAC 836940 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| || ||| || || |||| || || || || || | ||||||||||| || || Sbjct 7908817 CCTTCGCGGAGAGAATCGTCGCCTTCGCCTGCGTCGAAAGGATCTTCTTCTCCGGCAGCT 7908876 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 |||| | || | | ||||||||| ||||| |||||||| ||| | ||||||||||| Sbjct 7908877 TCTGTACGATCTTCTTGCTCAAGAAACGAGGGCTCATGCCTGGTTTGACCTTCTCCAACG 7908936 Query 94916 AGCTTATCTCTCGTGACGAGGG 94937 || | |||||||| ||||| || Sbjct 7908937 AGTTGATCTCTCGAGACGAAGG 7908958 >seq5 Length=38841276 Score = 116 bits (128), Expect = 4e-21 Identities = 284/424 (67%), Gaps = 16/424 (4%) Strand=Plus/Plus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| ||||| | | ||| ||||| || | || | ||||| || | | ||||| Sbjct 7899589 TCAAGAATATCTGCTCTATTAGTCGCAGCAACAACGATGATACCAGTGTTACCTTCAAAC 7899648 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 ||||||||||| ||||| || ||||| | ||| ||||| | |||||||| || Sbjct 7899649 CCATCCATCTCAGTCAACAGCTGGTTCAAAGTCTGTTCTCTCTCATCATTACCT------ 7899702 Query 9677 CCACC-AGCACTG-----CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 ||||| | | ||| | ||| | || || |||||||||||||||| ||||||||| Sbjct 7899703 CCACCAATCCCTGTCCCTCTCTGCCTCCCAACAGCATCAATCTCATCAACAAAGACGATG 7899762 Query 9731 CATGG-TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 9789 || || | | | | | | ||| ||| ||||| || || | || || ||||| Sbjct 7899763 CAAGGAGCGTTCTCCTTGGCCTTCTTGAAA-AGATCACGGACCCTGGAAGCACCAACACC 7899821 Query 9790 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCAC 9848 ||||||||||| || || | | ||| | |||| || ||| || ||| || ||||| Sbjct 7899822 GACAAACATCTCAACGAACTCAGACCCGG-AGATTGAGAAGAACGGCACACCAGCTTCAC 7899880 Query 9849 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 9908 | || || ||| || ||||| ||||| || ||||| || ||| || || ||| Sbjct 7899881 CAGCGATAGCTTTCGCCAGAAGCGTCTTCCCAGTACCGGGAGGACCAATAAGCAGAACAC 7899940 Query 9909 CTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAA 9968 | || ||| || ||| || | | |||||||| | ||| ||||| ||||| | Sbjct 7899941 CCTTCGGGATCCGAGCACCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCA 7900000 Query 9969 TTTC 9972 ||| Sbjct 7900001 CTTC 7900004 >seq2 Length=25468329 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 || || ||| | || | || || ||||| || || || ||||||||||| || |||| Sbjct 22243879 TTCGCCGAGAGGATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGAAGCTTC 22243820 Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917 ||| | || | ||||||||||||||||| |||||||| || ||| ||||||||||||| Sbjct 22243819 TGCTCCATCTTCTGGCTCAAGAAGCGAGGGCTCATGCCGGGGCTCACCTTCTCCAACGAG 22243760 Query 94918 CTTATCTCTCGTGACGAGGGACTCCAC 94944 || ||||| || ||||| || || ||| Sbjct 22243759 CTGATCTCGCGGGACGAAGGCCTTCAC 22243733 >seq12 Length=60369500 Score = 114 bits (126), Expect = 2e-20 Identities = 297/450 (66%), Gaps = 2/450 (0%) Strand=Plus/Minus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| || || || | ||| | ||| ||||| |||||| | | || || || Sbjct 11969693 CGGTCAAAACGGCCGGGTCTAAGCAAGGCGGAGTCAAGAATATCAGCTCTGTTGGTTGCA 11969634 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | || | || ||| || | | ||||||||||||||||| |||| ||| |||||| Sbjct 11969633 GCAACAACGATAACACCAGTGTTACCTTCAAAACCATCCATCTCCGTCAGAAGCTGGTTA 11969574 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 9703 | || ||||| | ||||||||| || | ||||| | | |||| | || || Sbjct 11969573 AGCGTCTGTTCTCTTTCATCATTACCTCCACCAATACCAGTTCCTCTTTGCCTACCAACA 11969514 Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 |||||||||||||| | ||||| || || || || || || || || ||| Sbjct 11969513 GCATCAATCTCATCCACAAAGACAATACAAGGAGCGTTCTCCTTGGCCTTTTTGAAAAGA 11969454 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9823 || || || | | || || ||||| ||||||||||| ||||| | | | | | || Sbjct 11969453 TCACGGACCCTCGAAGCACCAACACCGACAAACATCTCAACAAACTCAGAACCCG-AGAT 11969395 Query 9824 TG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9882 | | ||| || || || |||||| |||||||| || | || || || || || Sbjct 11969394 GGAAAAGAACGGTACGCCAGCTTCACCAGCAATGGCCTTTGCCAAGAGTGTTTTCCCAGT 11969335 Query 9883 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9942 ||| || ||| | ||||| ||||| || ||| || || || | | || Sbjct 11969334 ACCGGGAGGACCAACTAGGAGAACACCTTTCGGGATCCGAGCACCGACCGCAGTGAACCT 11969275 Query 9943 CTCAGGTTGCTTAAGAAAATCCACAATTTC 9972 |||||| | ||| ||||| ||||| | ||| Sbjct 11969274 CTCAGGCTTCTTCAGAAACTCCACCACTTC 11969245 >seq13 Length=83567108 Score = 113 bits (124), Expect = 5e-20 Identities = 283/428 (66%), Gaps = 4/428 (1%) Strand=Plus/Minus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| | |||| | |||||| || || | |||| | ||| | | | | ||| Sbjct 7106816 TCAAGCACATCAGGCCTATTCGTAGCAGCCAACACAATCACACCAGAGTTACCACTAAAC 7106757 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 ||||||||||| |||| | || ||||| || || |||| ||||||||| || | | Sbjct 7106756 CCATCCATCTCAGTCAGCAACTGATTAATCGTCTGCTCCCTCTCATCATTCCCT--CCTC 7106699 Query 9677 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 9734 ||| ||||| | | ||| | ||||| ||||||||||||||||| || || || || | Sbjct 7106698 CCATCCCAGCTCCTCTCTGCCTCCCCACAGCATCAATCTCATCAATAAAAACAATACAAG 7106639 Query 9735 GTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAA 9794 | || | ||| ||||| | ||||| || | ||| ||||||||||| | Sbjct 7106638 GCGCCTTAGCCTTAGCCTTCTCAAACAAATCCCTAACCCTAGAGGCACCCACACCAACGA 7106579 Query 9795 ACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAA 9854 | | ||| ||||| | | || | || || ||| || || || || || || | Sbjct 7106578 AAAGCTCAACAAACTCAGACGCCGCGCAGGAGAAGAACGGCACTCCAGCCTCTCCAGCCA 7106519 Query 9855 TGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTG 9914 |||| || | ||| ||||| || || || || |||| ||||||| ||| | Sbjct 7106518 CAGCTCTAGCTAAAAGCGTCTTCCCAGTCCCGGGGGGACCCACGAGGAGACACCCTTTGG 7106459 Query 9915 GAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTT 9974 ||||||||||||| || ||| | ||||| | ||| | ||| || || | ||||| Sbjct 7106458 GAATCTTGGCGCCCAAGGCAGTGTACTTATCAGGATTCTTCAAAAAGTCGACGACTTCTT 7106399 Query 9975 CCAATTCA 9982 ||| ||| Sbjct 7106398 GCAACTCA 7106391 >seq18 Length=77673080 Score = 111 bits (122), Expect = 2e-19 Identities = 142/195 (73%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 94809 ||||| || | ||||| |||| |||| | ||| ||| | | || || ||| | Sbjct 68188488 AAGAAGGCCCAATGGGCCATGACGTGGATCGATGG---GTCCCAGACTTTCGCCGAGAGG 68188432 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 94869 || | || || ||||| || || || ||||||||||| ||| ||||||| | || | Sbjct 68188431 ATCGTGGCCTTCGCGTGCGTGGAAGGGATCTTCTTCTCCGGTAGCTTCTGCTCGATCTTC 68188372 Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929 ||||||||||||||||| |||||||| || | ||||||||||||||| ||||| | Sbjct 68188371 TGGCTCAAGAAGCGAGGGCTCATGCCCGGGTTGACCTTCTCCAACGAGCTGATCTCGAGA 68188312 Query 94930 GACGAGGGACTCCAC 94944 ||||| || || ||| Sbjct 68188311 GACGAAGGCCTTCAC 68188297 >seq17 Length=44223734 Score = 111 bits (122), Expect = 2e-19 Identities = 251/372 (67%), Gaps = 8/372 (2%) Strand=Plus/Plus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 || ||||||||||| ||||| || || ||||| || || |||| ||||||||| || | Sbjct 18260857 AACCCATCCATCTCAGTCAACAGCTGATTAATCGTCTGCTCCCTCTCATCATTCCCT--C 18260914 Query 9674 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 9731 | ||| ||||| | | ||| | ||||| |||||||||||||| ||||| || |||| Sbjct 18260915 CTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCATCAATCTCATCGATGAAAACAATGC 18260974 Query 9732 ATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACACC 9789 | || || | ||| ||||| | ||||| || || || | || || ||||| Sbjct 18260975 AAGGCGCCTTGGCCTTAGCCTTCTCAAACAAATCCC-TA-ACTCTAGACGCACCAACACC 18261032 Query 9790 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9849 ||| || | ||||||||| | | || | ||| || ||| || || | ||| || Sbjct 18261033 AACGAAAAGCTCCACAAACTCAGAAGCCGCACAGGAGAAGAACGGCACTCCCGCTTCTCC 18261092 Query 9850 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 9909 || | ||| | || | ||||||||||| || || || ||| | ||||| || Sbjct 18261093 AGCCACGGCCCTAGCTAACAGAGTCTTACCAGTCCCAGGAGGACCAACAAGGAGACACCC 18261152 Query 9910 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAAT 9969 | |||||||| ||||| || ||| | || || | ||| | ||| || |||| Sbjct 18261153 TTTAGGAATCTTAGCGCCCAAGGCAGTGTACTTATCCGGATTCTTCAAAAAGTCGACAAC 18261212 Query 9970 TTCTTCCAATTC 9981 ||| | ||| || Sbjct 18261213 TTCCTGCAACTC 18261224 Score = 100 bits (110), Expect = 3e-16 Identities = 296/452 (65%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| || ||||| | || | || ||||| ||||| | | ||| || || Sbjct 43157840 CGGTCAAAACGCCCTGGTCTCAGCAAGGCAGAGTCAAGAATATCTGCTCTATTGGTTGCA 43157781 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | |||| || ||| || | | ||||| ||||||||||| ||||| || || ||| Sbjct 43157780 GCAACCACAATAACACCAGTGTTACCCTCAAACCCATCCATCTCAGTCAAGAGCTGATTA 43157721 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCA 9701 | || || || | ||||||||| || | | | |||| | | ||| | || | Sbjct 43157720 AGCGTCTGCTCTCTTTCATCATTACCT--CCACCGATTCCAGTTCCCCTCTGCCTACCAA 43157663 Query 9702 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGA 9761 | ||||||||||| || | || || ||||| || ||| || || || || | Sbjct 43157662 CAGCATCAATCTCGTCCACAAAAACAATGCACGGAGCATTCTCCTTGGCCTTTTTGAAAA 43157603 Query 9762 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 9821 |||| || || | | || || ||||| ||||||||||| ||||| | | | | | Sbjct 43157602 GATCACGGACCCTCGAAGCACCAACACCGACAAACATCTCAACAAACTCAGAACCCG-AG 43157544 Query 9822 ATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 9880 || | | ||| || ||| || |||||| || ||||| || | || || ||||| Sbjct 43157543 ATGGAAAAGAAAGGTACACCAGCTTCACCAGCGATGGCCTTCGCCAAGAGGGTTTTACCA 43157484 Query 9881 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTAT 9940 ||||| || || | |||||| ||||| || ||| || ||| || | | Sbjct 43157483 GTACCAGGAGGGCCAACAAGGAGGACACCTTTCGGGATCCGAGCACCAACCGCAGTGAAC 43157424 Query 9941 CTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972 |||||||| | ||| ||||| ||||| | ||| Sbjct 43157423 CTCTCAGGCTTCTTCAGAAACTCCACCACTTC 43157392 >seq47 Length=709205 Score = 104 bits (114), Expect = 3e-17 Identities = 276/415 (67%), Gaps = 10/415 (2%) Strand=Plus/Plus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| || || | | ||| || || || | || | ||||| || | | ||||| Sbjct 641051 TCAAGAATGTCTGCTCTATTGGTTGCAGCAACAACGATGATACCAGTGTTACCTTCAAAC 641110 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 ||||||||||| || | || || || | ||| || || | ||||||||| || | Sbjct 641111 CCATCCATCTCAGTTAGCAGCTGATTCAAAGTCTGCTCTCTTTCATCATTACCT---CCA 641167 Query 9677 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 ||| || | | | |||| | || || |||||||||||||| | ||||| ||||| Sbjct 641168 CCAATTCCTGTTCCTCTTTGCCTACCAACAGCATCAATCTCATCTACAAAGACAATGCAA 641227 Query 9734 GG-TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 || | | | | | | ||| ||| ||||| || || | | ||| || ||||| || Sbjct 641228 GGAGCGTTCTCCTTGGCCTTCTTGAAA-AGATCACGGACCCTCGAGGCACCAACACCGAC 641286 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851 ||||||||| ||||| | | ||| | || | || ||| || ||| || |||||| | Sbjct 641287 AAACATCTCAACAAACTCAGATCCGG-AGATGGAGAAGAAAGGCACACCAGCTTCACCGG 641345 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 9911 |||| ||| || | ||| ||||| || ||||| || ||| || || ||||| Sbjct 641346 CAATAGCTTTCGCCAAAAGCGTCTTCCCAGTACCAGGAGGACCAATAAGCAGAACACCTT 641405 Query 9912 GTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 || ||| ||| ||| || | | |||||||| | ||| ||||| ||||| Sbjct 641406 TCGGGATCCGGGCACCAACCGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCAC 641460 >seq14 Length=28343526 Score = 102 bits (112), Expect = 1e-16 Identities = 299/455 (66%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| || ||||| | ||| | || ||||| ||||| | | || || || Sbjct 17773188 CGGTCAAAACGGCCTGGTCTAAGCAAGGCAGAGTCAAGAATATCTGCTCTGTTGGTTGCA 17773129 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | || | | ||| || | | ||||||||||||||||| ||||| || || ||| Sbjct 17773128 GCAACTACGATGACACCAGTGTTACCTTCAAAACCATCCATCTCCGTCAAGAGCTGATTA 17773069 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCC 9700 | || ||||| | ||||||||| || |||| || | | | |||| | || Sbjct 17773068 AGCGTCTGTTCTCTTTCATCATTACCT---CCACCAATTCCGGTTCCTCTTTGCCTACCA 17773012 Query 9701 ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAG 9760 || ||||| || ||||| | ||||| ||||| || ||||| || || || Sbjct 17773011 ACAGCATCTATTTCATCCACAAAGACAATGCAGGGAGCGTTTTCCTTGGCCTTTTTGAAA 17772952 Query 9761 AGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9818 ||||| || || |||| || || ||||| || |||||||| ||||| | | | | Sbjct 17772951 AGATCACG--GACCCTTGAAGCACCAACACCGACGAACATCTCAACAAACTCAGAACCTG 17772894 Query 9819 AACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 | || | | ||| || ||| || |||||| |||||||| || | || || ||| Sbjct 17772893 -AGATGGAAAAGAAAGGTACACCAGCTTCACCAGCAATGGCCTTTGCCAAGAGGGTTTTA 17772835 Query 9878 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAG 9937 || ||||| || ||| | ||||| ||||| || ||| || ||| || | Sbjct 17772834 CCAGTACCAGGAGGACCAACAAGGAGAACACCTTTCGGGATCCGAGCACCAACCGCAGTG 17772775 Query 9938 TATCTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972 | |||||||| | ||| ||||| ||||| | ||| Sbjct 17772774 AACCTCTCAGGCTTCTTCAGAAACTCCACCACTTC 17772740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583189744253040