Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq18 134 2e-26 seq15 93.3 5e-14 seq11 91.5 2e-13 seq13 89.7 6e-13 seq5 87.8 2e-12 seq4 87.8 2e-12 seq3 87.8 2e-12 seq370 86.0 7e-12 seq349 86.0 7e-12 seq17 86.0 7e-12 seq16 86.0 7e-12 seq14 86.0 7e-12 seq12 86.0 7e-12 seq9 86.0 7e-12 seq8 86.0 7e-12 seq6 86.0 7e-12 seq1 86.0 7e-12 >seq18 Length=77673080 Score = 134 bits (148), Expect = 2e-26 Identities = 510/780 (65%), Gaps = 38/780 (5%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 |||||||| || | ||| || || |||||||| ||||| | | |||||| ||||||| Sbjct 68187998 TAATCACCAACTCTCTTCTCGAAGAAGTTGGTTTTCCCCTGAAGCGAGATCAACTCCATC 68188057 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTC---CCCAAACTGTGCCATGAGG 74579 || || || || ||| |||||||| | |||| | ||||| | ||| || Sbjct 68188058 CAATCAAACGGATTCGCCGCACCGTACAC---CTTCCCGTACCCAAGCGCCCCCAGAAGC 68188114 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTC-TCCCGCATCCATGCCGATGAGTTT 74638 | |||||||||||| | |||||||| |||| || || || || || | | Sbjct 68188115 CTATCCGCCACAAACTCGATGTACTGACTCATCAGGTCACGGTTC-ATCCCCACCAACGC 68188173 Query 74639 GCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATC 74696 |||||| || || ||| | |||||| ||||| | ||| || | | | | ||| ||| Sbjct 68188174 GCACGGAAGCGCGTCGCACACAAACTCCCTCTCGATCTC-CACGGCG-TCGCACACGATC 68188231 Query 74697 TTGTGAATGTCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAA 74755 | | | | | | ||| ||||||| | | ||| | | | |||| ||| Sbjct 68188232 GACTTCACGCGCTCCTCCGTGAGCTTCGTCCTCAGGAGCGTGTAGATCAGGCACGCGAAA 68188291 Query 74756 CTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCAT 74815 | | || |||||| ||||| |||| || || || || | | || ||||| Sbjct 68188292 TCGCAG-TGAAGGCCTTCGTCTCTCGAGATCAGCTCGTTGGAGAAGGTCAACCCGGGCAT 68188350 Query 74816 AAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTC 74875 || || |||||||| | ||| ||||| | |||||| ||| ||||||||| ||||| Sbjct 68188351 GAGCCCTCGCTTCTTGAGCCAGAAGATCGAGCAGAAGCTACCGGAGAAGAAGATCCCTTC 68188410 Query 74876 GACACACGCAAAGGCGACAAGGCGTTGCGCGAACGG-TG-----CATCGGAAGTCATCCA 74929 || ||||| ||||| || | | | ||||| | || ||||| ||||| Sbjct 68188411 CACGCACGCGAAGGCCACGATCCTCTCGGCGAAAGTCTGGGACCCATCG------ATCCA 68188464 Query 74930 AGTCTGAGCCCATTCAGCTTT--TCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAA 74986 ||| ||||||| || || ||| ||| |||||| | || |||||||| |||| Sbjct 68188465 CGTCATGGCCCATTGGGCCTTCTTCGC--GAC-GCAGGGGATGGTCTCGATCGCGCGGAA 68188521 Query 74987 GAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTC 75046 ||| || |||| | | ||||||| | | |||| | || || |||| |||| Sbjct 68188522 GAGATGGTCCCTCTCCTTGTTGTCCTTGATGTACGTGTCTAACAGGAGGCTGTACATCTC 68188581 Query 75047 CGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCT 75105 || || || |||| | ||| |||| || ||||||| | |||||||| | | || Sbjct 68188582 GGAGTGGATGTTCTCGATCG-CGATCTGGAACCCGTAGAAGGCGCGCGCCTCGGAGACCT 68188640 Query 75106 GTACATCCTT--TGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGC 75163 | || || |||| | | ||| ||||| | |||||| ||||| |||||||| Sbjct 68188641 GGACGTCGGACATGAACCGTGA--GGCGAGGTTCTCGAGGACGATTCCGTCGGAGGCGGC 68188698 Query 75164 GAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATC 75223 ||| || || || || |||||| ||||||||||| |||| |||| || ||||| || Sbjct 68188699 GAAGAAGGCGAGGACGTGTTTGATGAAGTGGCGCTCTCCGTCGTTGAGATTCTCCCAGTC 68188758 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| ||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 76256997 TGCTTTCGTTGAAAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 76256938 Query 79684 TGAGCTACGAAAGCA 79698 |||||||||| |||| Sbjct 76256937 TGAGCTACGAGAGCA 76256923 Score = 86.0 bits (94), Expect = 7e-12 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 79622 GACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACC 79680 || ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||| Sbjct 71019121 GATTGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACC 71019062 Query 79681 AATTGAGCTACGAAAGC 79697 || ||||||| |||||| Sbjct 71019061 AACTGAGCTATGAAAGC 71019045 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 75577973 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 75578032 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 75578033 TGAGCTATGAAAGC 75578046 >seq15 Length=50573455 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 79621 AGACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-AC 79679 ||| |||||||| |||| |||| |||| ||||||||||||||||||||||||||| || Sbjct 31530887 AGAATGCTTTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAAC 31530828 Query 79680 CAATTGAGCTACGAAAGC 79697 ||| |||||||||| ||| Sbjct 31530827 CAACTGAGCTACGAGAGC 31530810 >seq11 Length=32467241 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 5425701 TGCTTTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 5425642 Query 79684 TGAGCTACGAAAGCAAA 79700 |||||||||| ||| || Sbjct 5425641 TGAGCTACGAGAGCTAA 5425625 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 11588139 TGCTTTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 11588198 Query 79684 TGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 11588199 TGAGCTACGAGAGC 11588212 >seq13 Length=83567108 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| ||||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 10878215 TGCTTTCAATGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 10878274 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 10878275 TGAGCTATGAAAGC 10878288 >seq5 Length=38841276 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 5754943 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 5755002 Query 79684 TGAGCTACGAAAGCA 79698 ||||||| ||||||| Sbjct 5755003 TGAGCTATGAAAGCA 5755017 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 27234708 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 27234767 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 27234768 TGAGCTATGAAAGC 27234781 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 27236652 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 27236711 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 27236712 TGAGCTATGAAAGC 27236725 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 5070213 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 5070154 Query 79684 TGAGCTACGAAAGCA 79698 |||| || ||||||| Sbjct 5070153 TGAGTTATGAAAGCA 5070139 >seq4 Length=33175494 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 28091317 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 28091376 Query 79684 TGAGCTACGAAAGCA 79698 ||||||| ||||||| Sbjct 28091377 TGAGCTATGAAAGCA 28091391 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||| ||| |||| |||| |||| ||||||||||||||||||||||||| | ||||| Sbjct 8723042 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTTTAACCAAC 8722983 Query 79684 TGAGCTACGAAAGCA 79698 |||||||||| |||| Sbjct 8722982 TGAGCTACGAGAGCA 8722968 >seq3 Length=43957692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| ||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 41172351 TGCTTTCGTTGAAAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 41172292 Query 79684 TGAGCTACGAAAGCA 79698 |||||||||| |||| Sbjct 41172291 TGAGCTACGAGAGCA 41172277 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 10356123 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 10356182 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 10356183 TGAGCTATGAAAGC 10356196 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 34274095 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 34274154 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 34274155 TGAGCTATGAAAGC 34274168 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 36833088 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 36833147 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 36833148 TGAGCTATGAAAGC 36833161 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 39592836 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 39592895 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 39592896 TGAGCTATGAAAGC 39592909 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682 ||||| ||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 36925680 CTGCTCTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAA 36925739 Query 79683 TTGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 36925740 CTGAGCTACGAGAGC 36925754 >seq370 Length=106205 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||| ||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 28874 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 28815 Query 79684 TGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 28814 TGAGCTACGAGAGC 28801 >seq349 Length=109836 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 60984 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 61043 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 61044 TGAGCTATGAAAGC 61057 >seq17 Length=44223734 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 32945777 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 32945836 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 32945837 TGAGCTATGAAAGC 32945850 >seq16 Length=18736220 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 3259986 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 3260045 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 3260046 TGAGCTATGAAAGC 3260059 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 3273469 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 3273528 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 3273529 TGAGCTATGAAAGC 3273542 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 5530771 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 5530830 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 5530831 TGAGCTATGAAAGC 5530844 >seq14 Length=28343526 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 4481726 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 4481667 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 4481666 TGAGCTATGAAAGC 4481653 >seq12 Length=60369500 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 46929972 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 46929913 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 46929912 TGAGCTATGAAAGC 46929899 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 54109973 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 54110032 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 54110033 TGAGCTATGAAAGC 54110046 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 55570015 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 55570074 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 55570075 TGAGCTATGAAAGC 55570088 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 55570205 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 55570264 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 55570265 TGAGCTATGAAAGC 55570278 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 79623 ACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCA 79681 |||||| ||| |||| | || |||| ||||||||||||||||||||||||||| |||| Sbjct 46832297 ACTGCTCTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCA 46832238 Query 79682 ATTGAGCTACGAAAGC 79697 | |||||||||| ||| Sbjct 46832237 ACTGAGCTACGAGAGC 46832222 >seq9 Length=62778564 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/79 (86%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 79620 CAGACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-A 79678 |||| ||||||| |||| |||| |||| ||||||||||||||||||||||||||| | Sbjct 22022527 CAGA-TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAA 22022469 Query 79679 CCAATTGAGCTACGAAAGC 79697 |||| ||||||| |||||| Sbjct 22022468 CCAACTGAGCTATGAAAGC 22022450 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 46891933 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 46891992 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 46891993 TGAGCTATGAAAGC 46892006 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 46892123 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 46892182 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 46892183 TGAGCTATGAAAGC 46892196 >seq8 Length=29345952 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 3349269 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 3349210 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 3349209 TGAGCTATGAAAGC 3349196 >seq6 Length=38054609 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 36941454 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 36941513 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 36941514 TGAGCTATGAAAGC 36941527 >seq1 Length=45320942 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 22871527 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 22871586 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 22871587 TGAGCTATGAAAGC 22871600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547149335410800