Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq18 475 4e-129 seq144 185 1e-41 seq9 161 1e-34 seq14 145 1e-29 seq8 140 4e-28 seq7 89.7 6e-13 seq4 87.8 2e-12 seq3071 82.4 1e-10 >seq18 Length=77673080 Score = 475 bits (526), Expect = 4e-129 Identities = 977/1426 (69%), Gaps = 35/1426 (2%) Strand=Plus/Minus Query 185753 GGTTTCCATCCACAAACAGAGGCATTATGGTTG-ACTGATATAGCAC-ATCATCACCTTG 185810 || |||||||||||||| | |||||| | || || || |||| ||||||| || | Sbjct 3657619 GGATTCCATCCACAAACGCAAAGTTTATGGCTACACCGA-ATGGCACGATCATCATCTAG 3657561 Query 185811 CA-ATAGGAGTAATATTCATT-ATTGCAGGTCATATGT-ATAGA-AGT--GCTTGGGGTA 185864 | || | | | | ||| | ||||| | |||||||| ||||| | | |||| || | Sbjct 3657560 CTTATCGCAATTCTTTTCCCTCATTGCGGATCATATGTTATAGAGACTAAGCTTTGGA-A 3657502 Query 185865 TTGGTCACTCAATGAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTG 185924 | | ||| | | | |||| | |||||||||| || || ||||| | | || Sbjct 3657501 TCGACCACA-AGTATAAAAGATTTTAGAAGCACATATTCCTCCGGGAGGACGGTTGGGGC 3657443 Query 185925 CAGGTCATAAAGGATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTG 185984 || ||||| || | ||||| ||| | | | || | || | || ||||| |||| Sbjct 3657442 GTGGGCATAAGGGTCTTTATGACACAATCAATAATTCGATTCATTTTCAATTAGGCCTTG 3657383 Query 185985 CACTTGCATCTCTAGGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCAT 186044 | || || || |||| | | ||||| |||| || ||||| |||||||| | || Sbjct 3657382 CTCTAGCCTCCTTAGGAGCTATTACTTCCTTGGTAGCTCAACACATGTACTCTTTACCTG 3657323 Query 186045 CCTATGCTTTCATAGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAAT 186104 | ||||| |||||||| || | ||| || |||||||| ||||| ||||| ||| Sbjct 3657322 CTTATGCGTTCATAGCGCAAGATTTTACGACTCAAGCTGCGTTATATACCCATCAATAAT 3657263 Query 186105 ACATTGCA--ACTGCTCTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAG 186162 |||||||| | | || ||| || | |||||| |||||||| ||||||||| |||| Sbjct 3657262 ACATTGCAGGATTCATC--ATGACAGGAGTTTTTGCTCATGGAGCTATATTTTTTATTAG 3657205 Query 186163 AGACTTTGATCCTACTCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGA 186222 ||| | |||| | |||| |||| || || | | |||||| || | || ||||| Sbjct 3657204 AGATTACAATCCAGAACAGAATGAGGATAACGTATTGGCAAGAATGTTAGACCATAAAGA 3657145 Query 186223 AGCAATTATAAGTCACTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAAT 186282 ||| || ||| || |||||||||| || || || || ||||||||||| ||| | Sbjct 3657144 AGCTATCATATCCCATTTAAGTTGGGCCAGCCTCTTTCTAGGGTTCCATACTTTGGGACT 3657085 Query 186283 CTATGTCCATAATGATGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGA 186342 ||||| |||||||| || | | || |||||| ||| || | ||| || || || || Sbjct 3657084 TTATGTTCATAATGACGTCATGCTTGCTTTTGGTACTCCCGAAAAACAAATCTTGATCGA 3657025 Query 186343 ACCTATATTTGCACAGTGGATACAGGCAGCATCA-GGTAAGATGATGTATGGATT--AAG 186399 ||| |||||| | || |||||||| | || ||| || || | |||||||| | | Sbjct 3657024 ACCCATATTTTCCCAATGGATACAATCCGC-TCATGGGAAAACTTCATATGGATTTGATG 3656966 Query 186400 T-TTCTTACTATCTGATCCAAATAGTGCTGCAAGTCTAGCAG--CAGAGAGTATGCCTGG 186456 | | ||| || || ||||| | | ||| | || | | || |||| || Sbjct 3656965 TACTTTTATCTTCCGA--CAAATGGCCCAGCATTTAATGCGGGTCGAAGCATATGGTTG- 3656909 Query 186457 TAATCATTACTGGATGAGTGCTATGAATGATCAAACAAACAGTCTGTTTCTACCAATAGG 186516 | |||| | | |||||| ||||| | | || | || || ||||||| Sbjct 3656908 ----CCCGGCTGGTTAAATGCTATTAATGAGAATAGTAATTCATTATTCTTAACAATAGG 3656853 Query 186517 ACCTGCTGATTTATTAGTTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAAT 186576 |||| ||||| || ||||||||||||||||| | || |||||||| || || || || Sbjct 3656852 TCCTGGAGATTTCTTGGTTCATCATGCTATTGCTTTAGGTTTACATACAACTACATTGAT 3656793 Query 186577 CCTAGTCAAGGGTGCATTAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTT 186636 | |||| || ||||| |||||||| | ||||| || | || | |||||| || ||||| Sbjct 3656792 CTTAGTAAAAGGTGCTTTAGATGCACGTGGTTCCAAGTTAATGCTAGATAAAAAGGATTT 3656733 Query 186637 AGGATATTCATTCCCTTGTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTG 186696 || ||| || ||||| |||||||| || |||||||||||||||||| ||| | ||| Sbjct 3656732 CGGGTATAGTTTTCCTTGCGATGGTCCGGGACGAGGTGGTACTTGTGATATTTCGGCTTG 3656673 Query 186697 GGATGCTTTCTATCTCTCTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTA 186756 | | | || ||| | |||| || ||| || ||||| || | ||||| | ||||| Sbjct 3656672 GAACACATTTTATTTGGCTGTTTTTTGGATGTTAAATACTATTGGATGGG-TTACTTTTA 3656614 Query 186757 TTGGCACTGGAAGAACCTTGCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGG 186816 |||||| ||||| || | | ||||||||||| |||| || ||| ||| Sbjct 3656613 TTGGCATTGGAAACACATCACATTATGGCAAGGTAACGTTTCACATTTTAATGAATC-TC 3656555 Query 186817 AACATATCTTATGGGTTGGTTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCAC 186876 || ||| | | ||| ||||| ||||||||||| | | || | | | || | Sbjct 3656554 CACTTATTTGAGGGGATGGTTAAGAGATTATCTATAGTTAAACTCTTCAGAACTTATTAA 3656495 Query 186877 AGGGTACACACCATTTGGTATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGG 186936 || || | || ||||||||||||| | | || || ||||||||||||||||| ||||| Sbjct 3656494 TGGATATAACCCGTTTGGTATGAATAGTTTATCAGTCTGGGCATGGATGTTCTTATTTGG 3656435 Query 186937 TCATTTAGTTTGGGCAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGA 186996 ||| | |||||||| || |||||||||||| | ||||| ||| | ||||||||||| || Sbjct 3656434 GCATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGTGGTTATTGGCAGGA 3656375 Query 186997 GTTAATTGAGAC-TCTTGCTTGGGCACATCAAAGAACTCCAA---TAGCAAATATAGCAG 187052 || ||||| || | | || ||||| ||| | | | | || | | ||| | Sbjct 3656374 ATTGATTGAAACGTTTAGCATGGGCTCATGAGACAGTACAAACTTTTGGCAATTTGATTC 3656315 Query 187053 GTTGGAGAGATAAACCAGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCAC 187112 | |||| |||||||||||| || ||||| ||||| ||||||||| | ||||| ||| | | Sbjct 3656314 GATGGAAAGATAAACCAGTAGCTCTTTCAATTGTGCAAGCAAGATTGGTTGGATTAGCTC 3656255 Query 187113 ATTTTGCCATAGGATTTGTGCTTACCTATGCACCATTCCTGATAGC 187158 | ||| | |||| | | | | || ||||| | ||| |||| || Sbjct 3656254 ACTTTTCTGTAGGTTATATATTCACTTATGCGGCTTTCTTGATTGC 3656209 >seq144 Length=215082 Score = 185 bits (204), Expect = 1e-41 Identities = 397/582 (68%), Gaps = 20/582 (3%) Strand=Plus/Minus Query 186087 TATATGTTCATCATCAA-TACATTGCA--ACTGCTCTGATGGTTGGTGCTTTTGCGCATG 186143 |||||| ||||| ||| ||||||||| | | || ||| || | |||||| |||| Sbjct 206618 TATATGC-CATCACCAAATACATTGCAGGATTCATC--ATGACAGGAGTTTTTGCTCATG 206562 Query 186144 GAGCAATATTTTTTGTTAGAGACTTTGATCCTACTCTGAATAAGGACAATGTTCTTGATA 186203 |||| ||||||||| ||||||| | |||| | |||| |||| || || | | | Sbjct 206561 GAGCTATATTTTTTATTAGAGATTACAATCCAGAACAGAATGAGGATAACGTATTGGCAA 206502 Query 186204 GAATGCTACAGCACAAAGAAGCAATTATAAGTCACTTAAGTTGGGTATCACTATTCCTTG 186263 ||||| || | || |||||||| || ||| || |||||||||| || || || | Sbjct 206501 GAATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAGCCTCTTTCTAG 206442 Query 186264 GATTCCATACTTTAGGAATCTATGTCCATAATGATGTAGTAATGGCATTTGGTCATCCTG 186323 | ||||||||||| ||| | ||||| |||||||| || | | || |||||| ||| | Sbjct 206441 GGTTCCATACTTTGGGACTTTATGTTCATAATGACGTCATGCTTGCTTTTGGTACTCCCG 206382 Query 186324 AGAGACAGATATTAATTGAACCTATATTTGCACAGTGGATACAGGCAGCATCA-GGTAAG 186382 | | ||| || || || ||||| |||||| | || |||||||| | || ||| || || Sbjct 206381 AAAAACAAATCTTGATCGAACCCATATTTTCCCAATGGATACAATCCGC-TCATGGGAAA 206323 Query 186383 ATGATGTATGGATT--AAGT-TTCTTACTATCTGATCCAAATAGTGCTGCAAGTCTAGCA 186439 | |||||||| | || | ||| || || ||||| | | ||| | || Sbjct 206322 ACTTCATATGGATTTGATGTACTTTTATCTTCCGA--CAAATGGCCCAGCATTTAATGCG 206265 Query 186440 G--CAGAGAGTATGCCTGGTAATCATTACTGGATGAGTGCTATGAATGATCAAACAAACA 186497 | | || |||| || | |||| | | |||||| ||||| | | || Sbjct 206264 GGTCGAAGCATATGGTTG-----CCCGGCTGGTTAAATGCTATTAATGAGAATAGTAATT 206210 Query 186498 GTCTGTTTCTACCAATAGGACCTGCTGATTTATTAGTTCATCATGCTATTGCACTTGGAT 186557 | || || ||||||| |||| ||| | || ||||||||||||||||| || | Sbjct 206209 CATTATTCTTAACAATAGGTCCTGGAGATGTCTTGGTTCATCATGCTATTGCTTCAGGTT 206150 Query 186558 TACATACTACAACTTTAATCCTAGTCAAGGGTGCATTAGATGCTAGAGGTTCAAAACTCA 186617 ||||||| || || || ||| |||| || ||||| |||||||| | ||||| || | | Sbjct 206149 TACATACAACTACATTGATCTTAGTAAAAGGTGCTTTAGATGCACGTGGTTCCAAGTTAA 206090 Query 186618 TACCAGATAAGAAAGATTTAGGATATTCATTCCCTTGTGATG 186659 | | |||||| || ||||| || ||| || ||||| |||| Sbjct 206089 TGCTAGATAAAAAGGATTTCGGGTATAGTTTTCCTTGCGATG 206048 >seq9 Length=62778564 Score = 161 bits (178), Expect = 1e-34 Identities = 398/600 (66%), Gaps = 24/600 (4%) Strand=Plus/Minus Query 191226 TAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATTTGGAGTTGCAGCAA 191285 |||| |||||||| ||||| ||||||||||| ||| ||||| || || || | Sbjct 56234899 TAATTTATCCACTAGGTCAATCTGATTGGTTCTTTGTGCCTAGTTTTGGTGTAGCGGCTA 56234840 Query 191286 TCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACTCAACCCTTTCCACA 191345 | ||| ||| || || || | ||||| || || ||| |||| || | || || Sbjct 56234839 TATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGGCACTGAATTCATTTCATT 56234780 Query 191346 TGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTGCTACAG 191405 |||||||| |||| ||| | || || | || | |||| || ||| |||||||||| | Sbjct 56234779 TGATGGGAATTGCCGGTGTACTTGGCGCGGCTCTGTTATGCGCTATTGATGGTGCTACTG 56234720 Query 191406 TACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTTCAAAGTACAA 191465 || | || | || ||| || || ||||| | | | || || | Sbjct 56234719 TAGA-AATATTTTTTAT-----CTGAAA-----------ATGGTGATGGTGCAAATAAA- 56234678 Query 191466 CCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATCACTGCAAACA 191525 || | || ||| | |||| || | || ||||||||||| ||| |||| || ||| Sbjct 56234677 --TTATGTGCTTTTAACCCAATTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACC 56234620 Query 191526 GATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTACACTTCTTGA 191585 | || ||||||| || ||||| ||| || || || ||| | |||| ||||| | Sbjct 56234619 GCTTTTGGTCACGAATCTTTGGGGCTGCTTTTTCCAATAAACATTGGTTACAATTCTTTA 56234560 Query 191586 TGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTAGGTCTTGCAC 191645 |||| ||||| || |||| || | ||| | | | || |||||||| || Sbjct 56234559 TGTTATTTGTACCAGTAACTGGTTTAAGGATGAGTGCTCTTGTAATAGTAGGTCTAGCTT 56234500 Query 191646 TTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGT 191705 | ||| || | || |||| || | || ||||| || | ||||| ||||| || || Sbjct 56234499 TGAACCTATGTGCCTATGGCTTCATTTCCCAAGAAATTTGTGCAGCGGAAGATCCGGA-C 56234441 Query 191706 TTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGATGTC-- 191763 ||||||| ||||||||||| || |||||| | || |||||||| | | |||||| | Sbjct 56234440 TTGAAACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGCACTTGGATGGCGG 56234381 Query 191764 TTCAGTA-GACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCTAGAGGAA 191822 |||| | | || |||||||| ||| || | ||| | ||||| ||| |||| | |||| Sbjct 56234380 CTCAGGATCAGCAGCCTCATGAAAACATTATATTCACTGAGGAGGTTTTACCACGTGGAA 56234321 Score = 109 bits (120), Expect = 7e-19 Identities = 227/340 (67%), Gaps = 26/340 (8%) Strand=Plus/Minus Query 184875 AAGGACGTGCTGTTGGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCAT 184934 ||||||||||||| |||| | || | | | || || || ||||||||||||||||| | Sbjct 56169373 AAGGACGTGCTGTAAGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGT 56169314 Query 184935 TCTTCTTTGCTCACCTTATCCCCTTAAGTTAAATCATGGCTACTAAAAC----------- 184983 ||||||| || |||| | || | ||| |||||| || | Sbjct 56169313 TCTTCTTAGCAAGAATTATTGCAGTAGGATAA----TGGCTAGGAAGATTTGAAAGGCAT 56169258 Query 184984 ---------AAAATTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAG 185034 || |||||||| |||| |||| ||| || || || || ||| | | Sbjct 56169257 TATGGCATTAAGATTTCCAAGGTTTAGCCAAGGTTTAGCTCAGGACCCCACTACTCGTCG 56169198 Query 185035 ATTGTGGTATGGATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGA 185094 | |||| ||| | || || ||||||||||| ||||||||||| |||| || ||||| Sbjct 56169197 TATTTGGTTTGGTATTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAAGA 56169138 Query 185095 GAAGT-TATATCAAAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTAT 185153 | || | ||||| || | |||| | | || || || || | ||||| || ||||| | Sbjct 56169137 -ACGTCTTTATCAGAATATTTTTGTTTCTCATTTCGGGCAATTAGCAATAATTTTTCTGT 56169079 Query 185154 GGGTTGCAGGTAATTTAATTCATATAGCATGGCAAGGTAA 185193 || | | || ||||| ||||| |||| ||||||||||| Sbjct 56169078 GGACTTCCGGAAATTTGTTTCATGTAGCTTGGCAAGGTAA 56169039 >seq14 Length=28343526 Score = 145 bits (160), Expect = 1e-29 Identities = 182/250 (73%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 190025 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 190084 || ||||| | |||||||| |||||| ||||||| || || | | || ||| Sbjct 20845032 CTGGGTATACGTCCTTGGATTGCTGTTGCATATTCAGATCCTGTTGCAACTGCTATTGGT 20845091 Query 190085 GTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCTTTAGGTATC 190144 || ||| | | | |||| ||| ||| || || |||||| |||||||| |||| ||| Sbjct 20845092 GTTTTCTTGATCTGCCCAATTGATCAAGGAAGTTTTTCTGATAGTATGCCTCTAGGAATC 20845151 Query 190145 TCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACATAATATCCTTATGCACCCA 190204 || ||||| |||||||| ||| ||||||||||| | || || || || |||||||||||| Sbjct 20845152 TCTGGTACTTTCAACTTTATGGTTGTATTCCAAACTGAGCACAACATTCTTATGCACCCA 20845211 Query 190205 TTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTATTCTCTGCAATGCATGGT 190264 || || ||| ||||||||| ||| | || || || | | || ||| |||||| || Sbjct 20845212 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCTCTTTTTAGTGCTATGCATAGT 20845271 Query 190265 TCACTTGTAA 190274 || || |||| Sbjct 20845272 TCCCTGGTAA 20845281 >seq8 Length=29345952 Score = 140 bits (154), Expect = 4e-28 Identities = 223/318 (70%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 183825 TATCACTGAATCTGGCAATGCTAGGATCTATCAGTATCATAGTTTCACATCATATGTATG 183884 |||| || || |||| ||| |||| ||| | | ||| | || | || ||||||||| Sbjct 2057395 TATCTCTTAACATGGCTATGTTAGGCTCTTTAACTATTGTTGTAACTCACCATATGTATA 2057454 Query 183885 CAATGCCACCTTATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTCACCC 183944 | ||||| |||||||||||||| | || ||| ||| | ||| | || ||| ||||| | Sbjct 2057455 CCATGCCCCCTTATCCATATCTAGCTACTGATTATGCTACACAACTATCATTGTTCACAC 2057514 Query 183945 ATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGC--ATCAGCACATGCTTCAATTGC 184002 |||| |||||||| ||||| ||||| || || ||| | | || ||||| | ||| Sbjct 2057515 ATCACATGTGGATTGGTGGATTTCTCATAGTTGGTTCTGCTGCGCGCATGCAGCCATTTT 2057574 Query 184003 TATGATAAGAGACTATAATC---CTGTTCAACATATGGGAAATGTATTAGATAGAATACT 184059 |||| ||||||||||| ||| || || | | | | || |||||||| | | || Sbjct 2057575 TATGGTAAGAGACTATGATCAAACTAATCGATACAACG---ATTTATTAGATCGTGTCCT 2057631 Query 184060 TAAATCTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTTCA 184119 | | | |||||||| || ||| | ||||||| ||| || ||| ||| || || Sbjct 2057632 GAGGCATCGCGATGCAATGATATCACACCTCAACTGGGAATGTATATTTATAGTCTTCCA 2057691 Query 184120 TAGTTTTGGTCTTTATAT 184137 ||||||||| | ||||| Sbjct 2057692 CAGTTTTGGTTTGTATAT 2057709 Score = 82.4 bits (90), Expect = 1e-10 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 190502 AACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTAAAATTGTTCCA 190561 ||| ||||||||||||| || ||||| || ||||||||| ||||| || || Sbjct 10479929 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTTTTAAT 10479870 Query 190562 ACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGA 190614 || |||| ||| || ||||| | || ||||||||||||||||| ||| |||| Sbjct 10479869 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGTATGA 10479817 >seq7 Length=28547970 Score = 89.7 bits (98), Expect = 6e-13 Identities = 117/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 183789 TATATGAATTTCTAGCAGAATCAAGACATGCACAACTATCACTGAATCTGGCAATGCTAG 183848 |||||||| ||||| || |||||| ||||| ||| |||| || || ||||| ||| ||| Sbjct 28446663 TATATGAAATTCTAACAACATCAAGGCATGCTCAATTATCTCTTAACCTGGCTATGTTAG 28446722 Query 183849 GATCTATCAGTATCATAGTTTCACATCATATGTATGCAATGCCACC-TTATCCATATCTT 183907 | | | | | ||| | || | || ||||||||| | ||||| || |||||||||||| Sbjct 28446723 GCTATTTAACTATTGTTGTAACTCACCATATGTATTCCATGCCCCCCTTATCCATATCTA 28446782 Query 183908 GGTATTGAATATCCAACAGTAGTAGGATTATTCACCCATCA 183948 | || | ||| | ||| | || ||| ||||| |||| Sbjct 28446783 GCTACCAACTATGCTACACAATTATCATTGTTCACAAATCA 28446823 >seq4 Length=33175494 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 186239 TTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGAT 186298 |||||||||| || || || || ||||||||||| ||| | ||||| |||||||| Sbjct 32343361 TTAAGTTGGGCCAGCCTCTTTCTAGGGTTCCATACTTTGGGACTTTATGTTCATAATGAC 32343302 Query 186299 GTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACAG 186358 || | | || |||||| ||| || | ||| || || || ||||| |||||||| || Sbjct 32343301 GTCATGCTTGCTTTTGGTACTCCCGAAAAACAAATCTTGATCGAACCCATATTTGCCCAA 32343242 Query 186359 TGGATACA 186366 |||||||| Sbjct 32343241 TGGATACA 32343234 >seq3071 Length=6037 Score = 82.4 bits (90), Expect = 1e-10 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 190502 AACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTAAAATTGTTCCA 190561 ||| ||||||||||||| || ||||| || ||||||||| ||||| || || Sbjct 1741 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTTTTAAT 1682 Query 190562 ACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGA 190614 || |||| ||| || ||||| | || ||||||||||||||||| ||| |||| Sbjct 1681 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGTATGA 1629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631350276381360