Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq17 102 7e-17 seq9 102 7e-17 seq103 100 2e-16 seq91 100 2e-16 seq18 95.1 1e-14 seq12 95.1 1e-14 seq7 93.3 4e-14 seq37 91.5 1e-13 seq13 91.5 1e-13 seq1 87.8 2e-12 seq3 86.0 5e-12 seq14 84.2 2e-11 >seq17 Length=44223734 Score = 102 bits (112), Expect = 7e-17 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||||||||| | || | || | || || || ||| || || || || || ||||| Sbjct 18032497 GCCTCCTCTCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 18032438 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 ||||| || |||| || ||||| || || || || || |||||||||||||||| ||| Sbjct 18032437 GAGTGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 18032378 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCA 39235 | || || |||||| ||| || |||| ||| | | | || ||| || |||| Sbjct 18032377 GATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGGATTCCA 18032319 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTT 39288 | || | ||||| | || ||||| || ||||| || ||||| ||||||||| Sbjct 18032318 CCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTT 18032266 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| | ||||| ||||| || ||||| ||| || || || || || ||||| Sbjct 26221181 CCTCCTCTCAGGCGTAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 26221240 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || | |||| || ||||| || || || || || || ||||||||||| | || Sbjct 26221241 AGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGGG 26221300 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | || |||||| ||| || |||| | | | ||| ||| || || || Sbjct 26221301 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGACC 26221360 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTT 39288 || | || || | || |||||||| ||||| || ||||| ||||| ||| Sbjct 26221361 TCTAGGGTTATCGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATTTTT 26221411 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || |||||||| || || || ||| ||||| || || || |||||||| || || | Sbjct 34300897 CGCAACACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACCA 34300838 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| || || || || || |||||||||||||| | || | || || ||| Sbjct 34300837 TCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTG 34300778 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTG 39246 || ||| || |||| | | | || || ||| |||||| |||| ||| Sbjct 34300777 TCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCCGAGCT---CTCCACCTCCAGTGTG 34300721 Query 39247 ATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| |||| || || |||||||| ||||| Sbjct 34300720 ATGGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 34300683 >seq9 Length=62778564 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 52511138 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCTTCCAGCTG 52511079 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 || || || || || || ||||||||||||| || | || || |||||| ||| || Sbjct 52511078 CTTCCCGGCGAAAATCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTT 52511019 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| | | | || ||| ||||| || || | ||||| |||||||||| Sbjct 52511018 GGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTTCCCGT 52510959 Query 39261 CAGCGTTTTAACAAAGATTTGCATCTTTACGCCG 39294 || ||||| |||||||| ||||||||| || || Sbjct 52510958 AAGGGTTTTCACAAAGATCTGCATCTTTGCGGCG 52510925 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| | || || || ||||| || || || ||| || || ||||| ||||| || Sbjct 30454743 CCTCCACGTAGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCG 30454684 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || |||| |||| || ||||| || || ||||| || | |||||||||||||| || Sbjct 30454683 AGGGTTCTGCCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGA 30454624 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCAC 39236 | | ||| ||||| ||| || | || | ||| | | | || ||| |||||| Sbjct 30454623 ATCCCCTCCTTGTCTTGGATCTT-AGCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCAC 30454565 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | |||||| | ||||| || || |||||||| ||||| ||||| Sbjct 30454564 CTCGAGCGTGATCGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCAT 30454517 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/219 (70%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || |||||||| || || || ||| || || || || || |||||||| || || | Sbjct 30455187 CGCAACACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGACCA 30455128 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTT 39188 || |||||||| ||||| || || || |||||||||||||| || ||| | || || || Sbjct 30455127 TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCT-TCCTT 30455069 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGT 39245 ||| |||||| |||| | | | || || ||| |||||| || | || Sbjct 30455068 GTCTTGGATTTTGGCCTTGACGTTATCAATGGTGTCCGAGCT---CTCCACCTCAAGTGT 30455012 Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| | ||||| || || || || |||||||| ||||| Sbjct 30455011 GATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCAT 30454973 >seq103 Length=295709 Score = 100 bits (110), Expect = 2e-16 Identities = 156/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || ||||| || ||||| |||||| || || || || || || ||||| || | Sbjct 165362 CGCAAGACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAGTCAGCTAGTGTGCGACCA 165303 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| ||||| ||||| || |||||||||||||| | || | || ||||||| Sbjct 165302 TCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCTTTG 165243 Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245 ||| ||||| ||||| ||| | | | || || ||| ||| || || | || Sbjct 165242 TCCTGAATTTTAGCTTTGA-CGTTGTCAATGGTGTCAGAGCT---CTCAACTTCTAGAGT 165187 Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| || || || || |||||||| ||||| Sbjct 165186 AATCGTCTTTCCGGTGAGGGTCTTCACAAAGATCTGCAT 165148 >seq91 Length=316697 Score = 100 bits (110), Expect = 2e-16 Identities = 156/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || ||||| || ||||| |||||| || || || || || || ||||| || | Sbjct 307485 CGCAAGACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAGTCAGCTAGTGTGCGACCA 307426 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| ||||| ||||| || |||||||||||||| | || | || ||||||| Sbjct 307425 TCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCTTTG 307366 Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245 ||| ||||| ||||| ||| | | | || || ||| ||| || || | || Sbjct 307365 TCCTGAATTTTAGCTTTGA-CGTTGTCAATGGTGTCAGAGCT---CTCAACTTCTAGAGT 307310 Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| || || || || |||||||| ||||| Sbjct 307309 AATCGTCTTTCCGGTGAGGGTCTTCACAAAGATCTGCAT 307271 >seq18 Length=77673080 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | || | ||| | ||| |||||| ||| || || ||||| || || ||| Sbjct 62463114 CCACCTCTCAGACGAAGCACAAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCAGCA 62463055 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGG 39176 || || ||| | || || ||||| || || ||||| ||||| | |||||| || |||||| Sbjct 62463054 AGCGTGCGTCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGG 62462995 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC-ACCGTATC---GCTCGACT 39232 | | |||||| ||| ||| || |||| ||| | | | || || |||| | Sbjct 62462994 -ATTCCCTCTTTATCCTGGATCTTAGCCTTGA-CGTTGTCTATGGTGTCTGAGCTC---T 62462940 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||| ||||| |||| || || || || || |||||||||||||| Sbjct 62462939 CAACCTCCAAGGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 62462888 >seq12 Length=60369500 Score = 95.1 bits (104), Expect = 1e-14 Identities = 165/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 39045 AAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTAT 39104 |||| | | || ||||| | || || || ||||| || || || ||| || || || Sbjct 48265011 AAATATCTGCATACCTCCACGTAGTCGCAAGACCAAGTGAAGAGTCGACTCCTTCTGGAT 48264952 Query 39105 ATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTG 39164 || ||||| ||||| || ||| | || || || || ||||| || || || | | ||| Sbjct 48264951 GTTGTAATCAGCAAGAGTACGTCCATCCTCGAGTTGCTTGCCTGCGAAGATCAACCTCTG 48264892 Query 39165 CTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC 39224 |||||| | ||| | | ||||||||| ||| || ||||| | | | || || Sbjct 48264891 CTGGTCCGGGGGAATACCCTCTTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTC 48264832 Query 39225 GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||| || |||| |||||| | |||||||||| ||||||||||| || ||||| Sbjct 48264831 GGAGCTCTCAACCTCCAAAGTGATAGTCTTTCCCGTCAATGTTTTAACAAAAATCTGCAT 48264772 >seq7 Length=28547970 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 20574047 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGCCCGTCTTCGAGCTG 20573988 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||| || || || || || ||||||||||| | || | || || |||||| ||| || Sbjct 20573987 TTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTT 20573928 Query 39201 CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 |||| ||| | | | || ||| ||||| || || | ||||| | || |||| Sbjct 20573927 GGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTCCCCG 20573869 Query 39260 TCAGCGTTTTAACAAAGATTTGCATCTTTACGCCG 39294 | || ||||| || ||||| ||||||||| || || Sbjct 20573868 TGAGGGTTTTCACGAAGATCTGCATCTTTGCGGCG 20573834 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| | || | |||||| || ||||| ||| || || || || || || || Sbjct 12159604 CCTCCTCTCAGACGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 12159663 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || | |||| || ||||| || || || ||||| |||||||||||||| | || Sbjct 12159664 AGCGTCCTCCCGTCCTCCAGCTGCTTCCCGGCGAATATCAGACGCTGCTGGTCCGGCGGG 12159723 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | || |||||| || || |||| | | | ||| ||| || || || Sbjct 12159724 ATACCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGACC 12159783 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTT 39288 || | || || | || ||||| || ||||| |||||||| ||||| ||| Sbjct 12159784 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTTT 12159834 >seq37 Length=983866 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || ||| |||| || ||||| || || || || Sbjct 128555 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 128614 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||||||||||||||| | || | || || |||||| ||| || |||| ||| Sbjct 128615 GATAAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 128673 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || ||| || || || || | ||||| | || ||||| || ||||| | Sbjct 128674 TGTCGATGGTGTCGGAGGATTCAACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCA 128733 Query 39272 CAAAGATTTGCATCTTT 39288 | ||||| ||||||||| Sbjct 128734 CGAAGATCTGCATCTTT 128750 >seq13 Length=83567108 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| | | |||||||||||||| || || ||| || || || || ||||| Sbjct 62907612 CATGCCTCCACGCAGACGTAACACCAAATGAAGAGTTGACTCCTTCTGAATGTTGTAATC 62907553 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGT-CGG 39172 || | || || | || || ||||||||||| || || || ||||| ||||||| ||| Sbjct 62907552 TGCCAAGGTGCGACCATCCTCGAGCTGTTTGCCAGCGAAAATGAGACGTTGCTGGTCCGG 62907493 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGAC 39231 |||| | | ||| || || |||||| || | ||| | | | || ||| | Sbjct 62907492 TGGG-ATCCCCTCCTTATCTTGGATTTTGGCCTTCA-CGTTGTCAATAGTGTCGGAGCTC 62907435 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || | ||||| | || || ||||| || ||||||||||| ||||| Sbjct 62907434 TCCACCTCTAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACAAAGATCTGCAT 62907382 >seq1 Length=45320942 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||||||| |||| | | || || | ||| ||||| ||||| Sbjct 18861826 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAA 18861885 Query 39153 TATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCG 39211 || || | ||||||||| |||||| | | ||| || ||| ||| || || | || Sbjct 18861886 GATGAGCCTCTGCTGGTCCGGTGGG-ATTCCCTCCTTATCCTGGATCTTGGCCTTAA-CG 18861943 Query 39212 TCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | | | |||||| || || |||| ||||| | ||||| ||||| |||||| Sbjct 18861944 TTGTCGATGGTATCGGAGCTTTCAACCTCCAAAGTGATCGTCTTTCCGGTCAGAGTTTTA 18862003 Query 39271 ACAAAGATTTGCATCT 39286 |||||||| ||||||| Sbjct 18862004 ACAAAGATCTGCATCT 18862019 Score = 86.0 bits (94), Expect = 5e-12 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| | | || || ||||| || ||||| ||| || || || || ||||| Sbjct 18861559 CATGCCTCCACGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATC 18861618 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GG 39172 || | || || | || || ||||| || || ||||| || | | ||||||||| || Sbjct 18861619 TGCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGG 18861678 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACC-GTATCGCTCGAC 39231 |||| | | ||||||||| ||| || ||||| ||| | || || ||| Sbjct 18861679 TGGG-ATACCCTCTTTGTCTTGGATCTTGGCTTTGA-CGTTGTCAATAGTGTCGGAGCTT 18861736 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || |||| |||||| | |||||||||| || ||||| ||||||||||| Sbjct 18861737 TCAACCTCCAAAGTGATAGTCTTTCCCGTCAAAGTCTTAACGAAGATTTGCAT 18861789 >seq3 Length=43957692 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || ||| |||| || ||||| Sbjct 13791307 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCCAGCTGC 13791248 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || || || ||||||||||| | || | || || |||||| ||| || Sbjct 13791247 TTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 13791188 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | || ||| ||||| || || | ||||| | || ||||| Sbjct 13791187 GCCTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATTGTCTTCCCCGTG 13791128 Query 39262 AGCGTTTTAACAAAGATTTGCATCTTT 39288 || ||||| || ||||| ||||||||| Sbjct 13791127 AGGGTTTTCACGAAGATCTGCATCTTT 13791101 >seq14 Length=28343526 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || ||| |||| || ||||| || || || || Sbjct 25721915 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTACCGGCGAA 25721974 Query 39153 TATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCG 39211 || ||||||||||||| ||||||| | || || ||||| ||| || |||| || Sbjct 25721975 GATCAGACGCTGCTGGTCCGGTGGG-ATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CG 25722032 Query 39212 TCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | | | || ||| || || || || | || || | || ||||| || ||||| Sbjct 25722033 TTGTCGATGGTGTCGGAGGATTCGACCTCGAGGGTTATTGTCTTACCCGTGAGGGTTTTC 25722092 Query 39271 ACAAAGATTTGCATCTTTACGCCG 39294 || ||||| ||||||||| || || Sbjct 25722093 ACGAAGATCTGCATCTTTGCGGCG 25722116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429494578842098